RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 TRIM43Q96BQ3 446 aaPredicted RBP18.74■□□□□ 0.59
IRF1-211ENST00000613424 PRDM5Q9NQX1 630 aaPredicted RBP18.74■□□□□ 0.59
IRF1-211ENST00000613424 ZNF302Q9NR11 478 aa18.74■□□□□ 0.59
IRF1-211ENST00000613424 GTF2IRD1Q9UHL9 959 aa18.74■□□□□ 0.59
IRF1-211ENST00000613424 VAV3Q9UKW4 847 aa18.74■□□□□ 0.59
IRF1-211ENST00000613424 PCDHB6Q9Y5E3 794 aa18.74■□□□□ 0.59
IRF1-211ENST00000613424 STX6O43752 255 aa18.73■□□□□ 0.59
IRF1-211ENST00000613424 TXKP42681 527 aa18.73■□□□□ 0.59
IRF1-211ENST00000613424 HIC1Q14526 733 aa18.73■□□□□ 0.59
IRF1-211ENST00000613424 RILPL1Q5EBL4 403 aa18.73■□□□□ 0.59
IRF1-211ENST00000613424 PDXDC2PQ6P474 469 aa18.73■□□□□ 0.59
IRF1-211ENST00000613424 FERMT3Q86UX7 667 aa18.73■□□□□ 0.59
IRF1-211ENST00000613424 C4orf32Q8N8J7 132 aa18.73■□□□□ 0.59
IRF1-211ENST00000613424 RDM1Q8NG50 284 aa18.73■□□□□ 0.59
IRF1-211ENST00000613424 PCDH10Q9P2E7 1040 aa18.73■□□□□ 0.59
IRF1-211ENST00000613424 GABBR1Q9UBS5 961 aa18.73■□□□□ 0.59
IRF1-211ENST00000613424 PRKAG2Q9UGJ0 569 aa18.73■□□□□ 0.59
IRF1-211ENST00000613424 PCDHA12Q9UN75 941 aa18.73■□□□□ 0.59
IRF1-211ENST00000613424 MTMR6Q9Y217 621 aa18.73■□□□□ 0.59
IRF1-211ENST00000613424 MAFBQ9Y5Q3 323 aaPredicted RBP18.73■□□□□ 0.59
IRF1-211ENST00000613424 C17orf102A2RUQ5 167 aa18.72■□□□□ 0.59
IRF1-211ENST00000613424 EML1O00423 815 aa18.72■□□□□ 0.59
IRF1-211ENST00000613424 KIAA0355O15063 1070 aa18.72■□□□□ 0.59
IRF1-211ENST00000613424 ZNF200P98182 395 aaPredicted RBP18.72■□□□□ 0.59
IRF1-211ENST00000613424 BECN1Q14457 450 aa18.72■□□□□ 0.59
IRF1-211ENST00000613424 PLCB4Q15147 1175 aa18.72■□□□□ 0.59
IRF1-211ENST00000613424 PTGISQ16647 500 aa18.72■□□□□ 0.59
IRF1-211ENST00000613424 BRAPQ7Z569 592 aa18.72■□□□□ 0.59
IRF1-211ENST00000613424 TTC12Q9H892 705 aaPredicted RBP18.72■□□□□ 0.59
IRF1-211ENST00000613424 SETD4Q9NVD3 440 aa18.72■□□□□ 0.59
IRF1-211ENST00000613424 TBX21Q9UL17 535 aa18.72■□□□□ 0.59
IRF1-211ENST00000613424 CYP2C9P11712 490 aa18.71■□□□□ 0.59
IRF1-211ENST00000613424 ATP4AP20648 1035 aa18.71■□□□□ 0.59
IRF1-211ENST00000613424 ITGB8P26012 769 aa18.71■□□□□ 0.59
IRF1-211ENST00000613424 HOXC8P31273 242 aa18.71■□□□□ 0.59
IRF1-211ENST00000613424 SLC26A2P50443 739 aa18.71■□□□□ 0.59
IRF1-211ENST00000613424 SPIRE1Q08AE8 756 aa18.71■□□□□ 0.59
IRF1-211ENST00000613424 CTAGE1Q96RT6 745 aa18.71■□□□□ 0.59
IRF1-211ENST00000613424 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.71■□□□□ 0.59
IRF1-211ENST00000613424 NOD1Q9Y239 953 aa18.71■□□□□ 0.59
IRF1-211ENST00000613424 NRCAMQ92823 1304 aa18.71■□□□□ 0.59
IRF1-211ENST00000613424 POTEB3A0JP26 581 aa18.7■□□□□ 0.58
IRF1-211ENST00000613424 OR52Z1P0C646 297 aa18.7■□□□□ 0.58
IRF1-211ENST00000613424 GNAT1P11488 350 aa18.7■□□□□ 0.58
IRF1-211ENST00000613424 INSRRP14616 1297 aa18.7■□□□□ 0.58
IRF1-211ENST00000613424 RESTQ13127 1097 aa18.7■□□□□ 0.58
IRF1-211ENST00000613424 PTGDRQ13258 359 aa18.7■□□□□ 0.58
IRF1-211ENST00000613424 NCAPH2Q6IBW4 605 aa18.7■□□□□ 0.58
IRF1-211ENST00000613424 POTEBQ6S5H4 581 aa18.7■□□□□ 0.58
IRF1-211ENST00000613424 TRPC6Q9Y210 931 aa18.7■□□□□ 0.58
IRF1-211ENST00000613424 TREHO43280 583 aa18.69■□□□□ 0.58
IRF1-211ENST00000613424 ZNF862O60290 1169 aa18.69■□□□□ 0.58
IRF1-211ENST00000613424 TIMP1P01033 207 aa18.69■□□□□ 0.58
IRF1-211ENST00000613424 RAG1P15918 1043 aa18.69■□□□□ 0.58
IRF1-211ENST00000613424 ADAM17P78536 824 aa18.69■□□□□ 0.58
IRF1-211ENST00000613424 PPFIA1Q13136 1202 aa18.69■□□□□ 0.58
IRF1-211ENST00000613424 EPHA7Q15375 998 aa18.69■□□□□ 0.58
IRF1-211ENST00000613424 UGCGQ16739 394 aa18.69■□□□□ 0.58
IRF1-211ENST00000613424 CKAP2LQ8IYA6 745 aa18.69■□□□□ 0.58
IRF1-211ENST00000613424 TNPO1Q92973 898 aaKnown RBP18.69■□□□□ 0.58
IRF1-211ENST00000613424 ATP6V0A1Q93050 837 aa18.69■□□□□ 0.58
IRF1-211ENST00000613424 TRIP12Q14669 1992 aaPredicted RBP18.69■□□□□ 0.58
IRF1-211ENST00000613424 IGSF9BQ9UPX0 1349 aa18.69■□□□□ 0.58
IRF1-211ENST00000613424 MYH9P35579 1960 aaKnown RBP18.68■□□□□ 0.58
IRF1-211ENST00000613424 KAT6AQ92794 2004 aa18.68■□□□□ 0.58
IRF1-211ENST00000613424 HBP1O60381 514 aa18.68■□□□□ 0.58
IRF1-211ENST00000613424 PDIA4P13667 645 aaKnown RBP18.68■□□□□ 0.58
IRF1-211ENST00000613424 TECP42680 631 aa18.68■□□□□ 0.58
IRF1-211ENST00000613424 IGBP1P78318 339 aa18.68■□□□□ 0.58
IRF1-211ENST00000613424 GRIK4Q16099 956 aa18.68■□□□□ 0.58
IRF1-211ENST00000613424 MARCH8Q5T0T0 291 aa18.68■□□□□ 0.58
IRF1-211ENST00000613424 TRMT1LQ7Z2T5 733 aaKnown RBP18.68■□□□□ 0.58
IRF1-211ENST00000613424 BANK1Q8NDB2 785 aa18.68■□□□□ 0.58
IRF1-211ENST00000613424 ATP8B4Q8TF62 1192 aa18.68■□□□□ 0.58
IRF1-211ENST00000613424 LMBR1Q8WVP7 490 aa18.68■□□□□ 0.58
IRF1-211ENST00000613424 NOC4LQ9BVI4 516 aaKnown RBP18.68■□□□□ 0.58
IRF1-211ENST00000613424 PPP1R12CQ9BZL4 782 aa18.68■□□□□ 0.58
IRF1-211ENST00000613424 HIPK3Q9H422 1215 aa18.68■□□□□ 0.58
IRF1-211ENST00000613424 ZSCAN16Q9H4T2 348 aaPredicted RBP18.68■□□□□ 0.58
IRF1-211ENST00000613424 WDR81Q562E7 1941 aa18.68■□□□□ 0.58
IRF1-211ENST00000613424 RRN3P2A6NIE6 340 aa18.67■□□□□ 0.58
IRF1-211ENST00000613424 P4HBP07237 508 aaKnown RBP18.67■□□□□ 0.58
IRF1-211ENST00000613424 MDM2Q00987 491 aaPredicted RBP18.67■□□□□ 0.58
IRF1-211ENST00000613424 PTK7Q13308 1070 aa18.67■□□□□ 0.58
IRF1-211ENST00000613424 FAM173BQ6P4H8 233 aa18.67■□□□□ 0.58
IRF1-211ENST00000613424 BBXQ8WY36 941 aaPredicted RBP18.67■□□□□ 0.58
IRF1-211ENST00000613424 DHX38Q92620 1227 aaKnown RBP18.67■□□□□ 0.58
IRF1-211ENST00000613424 BADQ92934 168 aa18.67■□□□□ 0.58
IRF1-211ENST00000613424 NRBP2Q9NSY0 501 aa18.67■□□□□ 0.58
IRF1-211ENST00000613424 RGL1Q9NZL6 768 aa18.67■□□□□ 0.58
IRF1-211ENST00000613424 CEP290O15078 2479 aa18.66■□□□□ 0.58
IRF1-211ENST00000613424 POTEMA6NI47 508 aa18.66■□□□□ 0.58
IRF1-211ENST00000613424 LAD1O00515 517 aa18.66■□□□□ 0.58
IRF1-211ENST00000613424 CYP2C18P33260 490 aa18.66■□□□□ 0.58
IRF1-211ENST00000613424 MAGEA10P43363 369 aaPredicted RBP18.66■□□□□ 0.58
IRF1-211ENST00000613424 QARSP47897 775 aaKnown RBP18.66■□□□□ 0.58
IRF1-211ENST00000613424 PSMC5P62195 406 aa18.66■□□□□ 0.58
IRF1-211ENST00000613424 PRKCEQ02156 737 aa18.66■□□□□ 0.58
IRF1-211ENST00000613424 ZNF484Q5JVG2 852 aa18.66■□□□□ 0.58
IRF1-211ENST00000613424 FOXD4L5Q5VV16 416 aaPredicted RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms