RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 KCNK18Q7Z418 384 aa9.96□□□□□ -0.82
CCDC47-207ENST00000612558 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.96□□□□□ -0.82
CCDC47-207ENST00000612558 RIOX2Q8IUF8 465 aa9.96□□□□□ -0.82
CCDC47-207ENST00000612558 IL31RAQ8NI17 732 aa9.96□□□□□ -0.82
CCDC47-207ENST00000612558 NSUN6Q8TEA1 469 aaKnown RBP9.96□□□□□ -0.82
CCDC47-207ENST00000612558 TEKT3Q9BXF9 490 aa9.96□□□□□ -0.82
CCDC47-207ENST00000612558 A1CFQ9NQ94 594 aaKnown RBP9.96□□□□□ -0.82
CCDC47-207ENST00000612558 KCNH7Q9NS40 1196 aa9.96□□□□□ -0.82
CCDC47-207ENST00000612558 BTBD7Q9P203 1132 aa9.96□□□□□ -0.82
CCDC47-207ENST00000612558 EML1O00423 815 aa9.95□□□□□ -0.82
CCDC47-207ENST00000612558 MYCLP12524 364 aaPredicted RBP9.95□□□□□ -0.82
CCDC47-207ENST00000612558 MUTP22033 750 aa9.95□□□□□ -0.82
CCDC47-207ENST00000612558 CCND2P30279 289 aa9.95□□□□□ -0.82
CCDC47-207ENST00000612558 CDC25BP30305 580 aa9.95□□□□□ -0.82
CCDC47-207ENST00000612558 GJA5P36382 358 aa9.95□□□□□ -0.82
CCDC47-207ENST00000612558 FMR1Q06787 632 aaKnown RBP eCLIP9.95□□□□□ -0.82
CCDC47-207ENST00000612558 MTMR1Q13613 665 aa9.95□□□□□ -0.82
CCDC47-207ENST00000612558 B3GNT9Q6UX72 402 aa9.95□□□□□ -0.82
CCDC47-207ENST00000612558 VSIG10LQ86VR7 867 aa9.95□□□□□ -0.82
CCDC47-207ENST00000612558 SMYD4Q8IYR2 804 aaPredicted RBP9.95□□□□□ -0.82
CCDC47-207ENST00000612558 C2orf69Q8N8R5 385 aa9.95□□□□□ -0.82
CCDC47-207ENST00000612558 GIMAP8Q8ND71 665 aaPredicted RBP9.95□□□□□ -0.82
CCDC47-207ENST00000612558 MRFAP1L1Q96HT8 127 aa9.95□□□□□ -0.82
CCDC47-207ENST00000612558 HSD17B14Q9BPX1 270 aa9.95□□□□□ -0.82
CCDC47-207ENST00000612558 EIF2AK1Q9BQI3 630 aaKnown RBP9.95□□□□□ -0.82
CCDC47-207ENST00000612558 SPATC1LQ9H0A9 340 aa9.95□□□□□ -0.82
CCDC47-207ENST00000612558 HSD3B7Q9H2F3 369 aa9.95□□□□□ -0.82
CCDC47-207ENST00000612558 GBA2Q9HCG7 927 aaPredicted RBP9.95□□□□□ -0.82
CCDC47-207ENST00000612558 AGO4Q9HCK5 861 aaKnown RBP9.95□□□□□ -0.82
CCDC47-207ENST00000612558 TUFT1Q9NNX1 390 aa9.95□□□□□ -0.82
CCDC47-207ENST00000612558 TBC1D22BQ9NU19 505 aa9.95□□□□□ -0.82
CCDC47-207ENST00000612558 EXOC1Q9NV70 894 aa9.95□□□□□ -0.82
CCDC47-207ENST00000612558 FANCLQ9NW38 375 aa9.95□□□□□ -0.82
CCDC47-207ENST00000612558 DNM3Q9UQ16 869 aa9.95□□□□□ -0.82
CCDC47-207ENST00000612558 GOLGA6L6A8MZA4 724 aa9.94□□□□□ -0.82
CCDC47-207ENST00000612558 E9PMD0 336 aa9.94□□□□□ -0.82
CCDC47-207ENST00000612558 SOCS7O14512 581 aa9.94□□□□□ -0.82
CCDC47-207ENST00000612558 MAFGO15525 162 aa9.94□□□□□ -0.82
CCDC47-207ENST00000612558 SLC25A27O95847 323 aa9.94□□□□□ -0.82
CCDC47-207ENST00000612558 PTMAP06454 111 aaKnown RBP9.94□□□□□ -0.82
CCDC47-207ENST00000612558 NR3C2P08235 984 aa9.94□□□□□ -0.82
CCDC47-207ENST00000612558 PLA2G4BP0C869 781 aa9.94□□□□□ -0.82
CCDC47-207ENST00000612558 COPB2P35606 906 aa9.94□□□□□ -0.82
CCDC47-207ENST00000612558 PPP1R2P41236 205 aa9.94□□□□□ -0.82
CCDC47-207ENST00000612558 PDE4DQ08499 809 aa9.94□□□□□ -0.82
CCDC47-207ENST00000612558 STIM1Q13586 685 aa9.94□□□□□ -0.82
CCDC47-207ENST00000612558 EPHA7Q15375 998 aa9.94□□□□□ -0.82
CCDC47-207ENST00000612558 SPATA1Q5VX52 437 aa9.94□□□□□ -0.82
CCDC47-207ENST00000612558 KLHL10Q6JEL2 608 aa9.94□□□□□ -0.82
CCDC47-207ENST00000612558 GPAT2Q6NUI2 795 aa9.94□□□□□ -0.82
CCDC47-207ENST00000612558 TRIM67Q6ZTA4 783 aa9.94□□□□□ -0.82
CCDC47-207ENST00000612558 UNC13DQ70J99 1090 aa9.94□□□□□ -0.82
CCDC47-207ENST00000612558 NLRX1Q86UT6 975 aa9.94□□□□□ -0.82
CCDC47-207ENST00000612558 ANKRD35Q8N283 1001 aa9.94□□□□□ -0.82
CCDC47-207ENST00000612558 DNERQ8NFT8 737 aa9.94□□□□□ -0.82
CCDC47-207ENST00000612558 PURBQ96QR8 312 aaKnown RBP9.94□□□□□ -0.82
CCDC47-207ENST00000612558 MED15Q96RN5 788 aa9.94□□□□□ -0.82
CCDC47-207ENST00000612558 IWS1Q96ST2 819 aa9.94□□□□□ -0.82
CCDC47-207ENST00000612558 RWDD2AQ9UIY3 292 aa9.94□□□□□ -0.82
CCDC47-207ENST00000612558 GDAQ9Y2T3 454 aa9.94□□□□□ -0.82
CCDC47-207ENST00000612558 NFE2L3Q9Y4A8 694 aa9.94□□□□□ -0.82
CCDC47-207ENST00000612558 PFASO15067 1338 aa9.94□□□□□ -0.82
CCDC47-207ENST00000612558 DHX15O43143 795 aaKnown RBP9.93□□□□□ -0.82
CCDC47-207ENST00000612558 CNMDO75829 334 aa9.93□□□□□ -0.82
CCDC47-207ENST00000612558 STAM2O75886 525 aa9.93□□□□□ -0.82
CCDC47-207ENST00000612558 SLITRK3O94933 977 aa9.93□□□□□ -0.82
CCDC47-207ENST00000612558 CELF2O95319 508 aaKnown RBP9.93□□□□□ -0.82
CCDC47-207ENST00000612558 SSBP05455 408 aaKnown RBP eCLIP9.93□□□□□ -0.82
CCDC47-207ENST00000612558 CETPP11597 493 aa9.93□□□□□ -0.82
CCDC47-207ENST00000612558 PRCPP42785 496 aa9.93□□□□□ -0.82
CCDC47-207ENST00000612558 GTF2A2P52657 109 aa9.93□□□□□ -0.82
CCDC47-207ENST00000612558 SLC12A3P55017 1021 aa9.93□□□□□ -0.82
CCDC47-207ENST00000612558 FANCCQ00597 558 aa9.93□□□□□ -0.82
CCDC47-207ENST00000612558 PAK1Q13153 545 aa9.93□□□□□ -0.82
CCDC47-207ENST00000612558 PSMD2Q13200 908 aa9.93□□□□□ -0.82
CCDC47-207ENST00000612558 ZNF697Q5TEC3 545 aa9.93□□□□□ -0.82
CCDC47-207ENST00000612558 DYMQ7RTS9 669 aa9.93□□□□□ -0.82
CCDC47-207ENST00000612558 NCAPG2Q86XI2 1143 aa9.93□□□□□ -0.82
CCDC47-207ENST00000612558 TRMT44Q8IYL2 757 aaKnown RBP9.93□□□□□ -0.82
CCDC47-207ENST00000612558 ADSSL1Q8N142 457 aa9.93□□□□□ -0.82
CCDC47-207ENST00000612558 NEK9Q8TD19 979 aa9.93□□□□□ -0.82
CCDC47-207ENST00000612558 GTF3C2Q8WUA4 911 aaPredicted RBP9.93□□□□□ -0.82
CCDC47-207ENST00000612558 GPRASP2Q96D09 838 aa9.93□□□□□ -0.82
CCDC47-207ENST00000612558 PAGR1Q9BTK6 254 aa9.93□□□□□ -0.82
CCDC47-207ENST00000612558 UNC45AQ9H3U1 944 aa9.93□□□□□ -0.82
CCDC47-207ENST00000612558 RBPJLQ9UBG7 517 aa9.93□□□□□ -0.82
CCDC47-207ENST00000612558 SLC45A1Q9Y2W3 748 aa9.93□□□□□ -0.82
CCDC47-207ENST00000612558 A0A0G2JMZ2 1700 aa9.93□□□□□ -0.82
CCDC47-207ENST00000612558 SYNRGQ9UMZ2 1314 aa9.93□□□□□ -0.82
CCDC47-207ENST00000612558 TESPA1A2RU30 521 aaPredicted RBP9.92□□□□□ -0.82
CCDC47-207ENST00000612558 PSMA7O14818 248 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 CHMP2AO43633 222 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 EYA4O95677 639 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 TPM3P06753 285 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 CFHP08603 1231 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 ATP1A3P13637 1013 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 ZNF18P17022 549 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 CDK11BP21127 795 aaKnown RBP9.92□□□□□ -0.82
CCDC47-207ENST00000612558 CYP4A11Q02928 519 aa9.92□□□□□ -0.82
CCDC47-207ENST00000612558 CTTNQ14247 550 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms