RNA–Protein interactions for RNA: ENST00000612548.4

CIT-219, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 1 (best) BASIC

Gene CIT, Length 1,799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-219ENST00000612548 QARSP47897 775 aaKnown RBP16.47■□□□□ 0.23
CIT-219ENST00000612548 UGCGQ16739 394 aa16.47■□□□□ 0.23
CIT-219ENST00000612548 SMAP1Q8IYB5 467 aaPredicted RBP16.47■□□□□ 0.23
CIT-219ENST00000612548 KCTD17Q8N5Z5 321 aa16.47■□□□□ 0.23
CIT-219ENST00000612548 NACC1Q96RE7 527 aa16.47■□□□□ 0.23
CIT-219ENST00000612548 ZSWIM4Q9H7M6 989 aa16.47■□□□□ 0.23
CIT-219ENST00000612548 GDAQ9Y2T3 454 aa16.47■□□□□ 0.23
CIT-219ENST00000612548 NPHP3-ACAD11A0A0J9YXS1 232 aa16.46■□□□□ 0.23
CIT-219ENST00000612548 GOLGA6L19H0YKK7 550 aa16.46■□□□□ 0.23
CIT-219ENST00000612548 RHOBTB3O94955 611 aa16.46■□□□□ 0.23
CIT-219ENST00000612548 KRT18P05783 430 aaKnown RBP16.46■□□□□ 0.23
CIT-219ENST00000612548 IDEP14735 1019 aa16.46■□□□□ 0.23
CIT-219ENST00000612548 ACTR2P61160 394 aa16.46■□□□□ 0.23
CIT-219ENST00000612548 RAD51AP2Q09MP3 1159 aa16.46■□□□□ 0.23
CIT-219ENST00000612548 LY6KQ17RY6 165 aa16.46■□□□□ 0.23
CIT-219ENST00000612548 ZNF658Q5TYW1 1059 aaPredicted RBP16.46■□□□□ 0.23
CIT-219ENST00000612548 CNNM4Q6P4Q7 775 aa16.46■□□□□ 0.23
CIT-219ENST00000612548 UNC13DQ70J99 1090 aa16.46■□□□□ 0.23
CIT-219ENST00000612548 ZNF467Q7Z7K2 595 aaPredicted RBP16.46■□□□□ 0.23
CIT-219ENST00000612548 DNAJC19Q96DA6 116 aa16.46■□□□□ 0.23
CIT-219ENST00000612548 BMP2KQ9NSY1 1161 aaPredicted RBP16.46■□□□□ 0.23
CIT-219ENST00000612548 PCDHA10Q9Y5I2 948 aa16.46■□□□□ 0.23
CIT-219ENST00000612548 FARP2O94887 1054 aaPredicted RBP16.46■□□□□ 0.22
CIT-219ENST00000612548 TGFB3P10600 412 aa16.46■□□□□ 0.22
CIT-219ENST00000612548 CD44P16070 742 aaKnown RBP16.46■□□□□ 0.22
CIT-219ENST00000612548 CACNB1Q02641 598 aaPredicted RBP16.46■□□□□ 0.22
CIT-219ENST00000612548 NEDD9Q14511 834 aa16.46■□□□□ 0.22
CIT-219ENST00000612548 ARSHQ5FYA8 562 aa16.46■□□□□ 0.22
CIT-219ENST00000612548 MORN1Q5T089 497 aa16.46■□□□□ 0.22
CIT-219ENST00000612548 KLHL10Q6JEL2 608 aa16.46■□□□□ 0.22
CIT-219ENST00000612548 NPLOC4Q8TAT6 608 aa16.46■□□□□ 0.22
CIT-219ENST00000612548 MAML3Q96JK9 1138 aa16.46■□□□□ 0.22
CIT-219ENST00000612548 RUSC1Q9BVN2 902 aa16.46■□□□□ 0.22
CIT-219ENST00000612548 GABBR1Q9UBS5 961 aa16.46■□□□□ 0.22
CIT-219ENST00000612548 DDX41Q9UJV9 622 aaKnown RBP16.46■□□□□ 0.22
CIT-219ENST00000612548 GGPS1O95749 300 aa16.45■□□□□ 0.22
CIT-219ENST00000612548 ALDH1A1P00352 501 aa16.45■□□□□ 0.22
CIT-219ENST00000612548 PSAPP07602 524 aa16.45■□□□□ 0.22
CIT-219ENST00000612548 PSMC5P62195 406 aa16.45■□□□□ 0.22
CIT-219ENST00000612548 KCNV1Q6PIU1 500 aa16.45■□□□□ 0.22
CIT-219ENST00000612548 GIMAP8Q8ND71 665 aaPredicted RBP16.45■□□□□ 0.22
CIT-219ENST00000612548 HPS3Q969F9 1004 aa16.45■□□□□ 0.22
CIT-219ENST00000612548 PDGFCQ9NRA1 345 aa16.45■□□□□ 0.22
CIT-219ENST00000612548 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.45■□□□□ 0.22
CIT-219ENST00000612548 DIS3Q9Y2L1 958 aaKnown RBP16.45■□□□□ 0.22
CIT-219ENST00000612548 MGAMO43451 1857 aa16.45■□□□□ 0.22
CIT-219ENST00000612548 PVALEFA0A1B0GWK0 134 aa16.44■□□□□ 0.22
CIT-219ENST00000612548 PPP1R3GB7ZBB8 358 aa16.44■□□□□ 0.22
CIT-219ENST00000612548 PLCB2Q00722 1185 aa16.44■□□□□ 0.22
CIT-219ENST00000612548 MAP2K5Q13163 448 aa16.44■□□□□ 0.22
CIT-219ENST00000612548 MIS18BP1Q6P0N0 1132 aa16.44■□□□□ 0.22
CIT-219ENST00000612548 ABHD15Q6UXT9 468 aa16.44■□□□□ 0.22
CIT-219ENST00000612548 TRMT1LQ7Z2T5 733 aaKnown RBP16.44■□□□□ 0.22
CIT-219ENST00000612548 TRMT44Q8IYL2 757 aaKnown RBP16.44■□□□□ 0.22
CIT-219ENST00000612548 SLC5A4Q9NY91 659 aa16.44■□□□□ 0.22
CIT-219ENST00000612548 CTNND2Q9UQB3 1225 aa16.44■□□□□ 0.22
CIT-219ENST00000612548 MAPK8IP1Q9UQF2 711 aa16.44■□□□□ 0.22
CIT-219ENST00000612548 PCNTO95613 3336 aa16.44■□□□□ 0.22
CIT-219ENST00000612548 ZSWIM8A7E2V4 1837 aa16.44■□□□□ 0.22
CIT-219ENST00000612548 MYH9P35579 1960 aaKnown RBP16.44■□□□□ 0.22
CIT-219ENST00000612548 SYNGAP1Q96PV0 1343 aa16.44■□□□□ 0.22
CIT-219ENST00000612548 ARHGEF35A5YM69 484 aa16.43■□□□□ 0.22
CIT-219ENST00000612548 SMTNL1A8MU46 457 aa16.43■□□□□ 0.22
CIT-219ENST00000612548 LYPLA2O95372 231 aa16.43■□□□□ 0.22
CIT-219ENST00000612548 SUPT20HL2P0C7V6 817 aa16.43■□□□□ 0.22
CIT-219ENST00000612548 MYL5Q02045 173 aa16.43■□□□□ 0.22
CIT-219ENST00000612548 COASYQ13057 564 aa16.43■□□□□ 0.22
CIT-219ENST00000612548 NCAPHQ15003 741 aa16.43■□□□□ 0.22
CIT-219ENST00000612548 RINT1Q6NUQ1 792 aa16.43■□□□□ 0.22
CIT-219ENST00000612548 SWSAP1Q6NVH7 229 aa16.43■□□□□ 0.22
CIT-219ENST00000612548 MAMDC4Q6UXC1 1216 aa16.43■□□□□ 0.22
CIT-219ENST00000612548 CCDC60Q8IWA6 550 aaPredicted RBP16.43■□□□□ 0.22
CIT-219ENST00000612548 C4orf19Q8IY42 314 aa16.43■□□□□ 0.22
CIT-219ENST00000612548 SCFD2Q8WU76 684 aa16.43■□□□□ 0.22
CIT-219ENST00000612548 ANP32BQ92688 251 aaKnown RBP16.43■□□□□ 0.22
CIT-219ENST00000612548 REEP2Q9BRK0 252 aa16.43■□□□□ 0.22
CIT-219ENST00000612548 MLXIPQ9HAP2 919 aa16.43■□□□□ 0.22
CIT-219ENST00000612548 VTA1Q9NP79 307 aa16.43■□□□□ 0.22
CIT-219ENST00000612548 PANK4Q9NVE7 773 aa16.43■□□□□ 0.22
CIT-219ENST00000612548 TMEM150BA6NC51 233 aa16.43■□□□□ 0.22
CIT-219ENST00000612548 TNPO2O14787 897 aaKnown RBP16.43■□□□□ 0.22
CIT-219ENST00000612548 BACH1O14867 736 aa16.43■□□□□ 0.22
CIT-219ENST00000612548 IKBKBO14920 756 aa16.43■□□□□ 0.22
CIT-219ENST00000612548 SNAI1O95863 264 aaPredicted RBP16.43■□□□□ 0.22
CIT-219ENST00000612548 YWHABP31946 246 aaKnown RBP16.43■□□□□ 0.22
CIT-219ENST00000612548 PRCPP42785 496 aa16.43■□□□□ 0.22
CIT-219ENST00000612548 STK4Q13043 487 aa16.43■□□□□ 0.22
CIT-219ENST00000612548 GIT2Q14161 759 aa16.43■□□□□ 0.22
CIT-219ENST00000612548 TTLL4Q14679 1199 aa16.43■□□□□ 0.22
CIT-219ENST00000612548 TMEM63BQ5T3F8 832 aa16.43■□□□□ 0.22
CIT-219ENST00000612548 CCDC62Q6P9F0 684 aa16.43■□□□□ 0.22
CIT-219ENST00000612548 METTL7BQ6UX53 244 aa16.43■□□□□ 0.22
CIT-219ENST00000612548 CCDC65Q8IXS2 484 aa16.43■□□□□ 0.22
CIT-219ENST00000612548 KIAA0895Q8NCT3 520 aa16.43■□□□□ 0.22
CIT-219ENST00000612548 COPS5Q92905 334 aa16.43■□□□□ 0.22
CIT-219ENST00000612548 ATP6V0A1Q93050 837 aa16.43■□□□□ 0.22
CIT-219ENST00000612548 TINF2Q9BSI4 451 aa16.43■□□□□ 0.22
CIT-219ENST00000612548 ZHX3Q9H4I2 956 aa16.43■□□□□ 0.22
CIT-219ENST00000612548 SLC39A2Q9NP94 309 aa16.43■□□□□ 0.22
CIT-219ENST00000612548 SYNRGQ9UMZ2 1314 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms