RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 COASYQ13057 564 aa16.22■□□□□ 0.19
CDH1-213ENST00000612417 ECM1Q16610 540 aa16.22■□□□□ 0.19
CDH1-213ENST00000612417 MAP9Q49MG5 647 aa16.22■□□□□ 0.19
CDH1-213ENST00000612417 IQCEQ6IPM2 695 aa16.22■□□□□ 0.19
CDH1-213ENST00000612417 MYOCDQ8IZQ8 938 aa16.22■□□□□ 0.19
CDH1-213ENST00000612417 WRNIP1Q96S55 665 aa16.22■□□□□ 0.19
CDH1-213ENST00000612417 ACBD3Q9H3P7 528 aa16.22■□□□□ 0.19
CDH1-213ENST00000612417 FAM207AQ9NSI2 230 aaPredicted RBP16.22■□□□□ 0.19
CDH1-213ENST00000612417 GINM1Q9NU53 330 aa16.22■□□□□ 0.19
CDH1-213ENST00000612417 FEM1BQ9UK73 627 aa16.22■□□□□ 0.19
CDH1-213ENST00000612417 FZD1Q9UP38 647 aa16.22■□□□□ 0.19
CDH1-213ENST00000612417 PCDHA13Q9Y5I0 950 aa16.22■□□□□ 0.19
CDH1-213ENST00000612417 FKBP3Q00688 224 aaKnown RBP16.22■□□□□ 0.19
CDH1-213ENST00000612417 FAM160B2Q86V87 743 aa16.22■□□□□ 0.19
CDH1-213ENST00000612417 ZKSCAN4Q969J2 545 aaPredicted RBP16.22■□□□□ 0.19
CDH1-213ENST00000612417 MED4Q9NPJ6 270 aa16.22■□□□□ 0.19
CDH1-213ENST00000612417 PICK1Q9NRD5 415 aa16.22■□□□□ 0.19
CDH1-213ENST00000612417 SNX12Q9UMY4 172 aa16.22■□□□□ 0.19
CDH1-213ENST00000612417 SSU72P8A0A1W2PR75 194 aa16.21■□□□□ 0.19
CDH1-213ENST00000612417 MACROD2A1Z1Q3 448 aa16.21■□□□□ 0.19
CDH1-213ENST00000612417 PJA2O43164 708 aa16.21■□□□□ 0.19
CDH1-213ENST00000612417 TACC1O75410 805 aa16.21■□□□□ 0.19
CDH1-213ENST00000612417 EIF4A3P38919 411 aaKnown RBP16.21■□□□□ 0.19
CDH1-213ENST00000612417 TRAF1Q13077 416 aa16.21■□□□□ 0.19
CDH1-213ENST00000612417 MAPK8IP2Q13387 824 aaPredicted RBP16.21■□□□□ 0.19
CDH1-213ENST00000612417 KRT26Q7Z3Y9 468 aa16.21■□□□□ 0.19
CDH1-213ENST00000612417 FAM71BQ8TC56 605 aa16.21■□□□□ 0.19
CDH1-213ENST00000612417 CEP63Q96MT8 703 aa16.21■□□□□ 0.19
CDH1-213ENST00000612417 MMRN2Q9H8L6 949 aa16.21■□□□□ 0.19
CDH1-213ENST00000612417 FBXO28Q9NVF7 368 aa16.21■□□□□ 0.19
CDH1-213ENST00000612417 PCDHA12Q9UN75 941 aa16.21■□□□□ 0.19
CDH1-213ENST00000612417 COL4A3BPQ9Y5P4 624 aa16.21■□□□□ 0.19
CDH1-213ENST00000612417 LRRC53A6NM62 1247 aa16.2■□□□□ 0.18
CDH1-213ENST00000612417 AARSP49588 968 aaKnown RBP eCLIP16.2■□□□□ 0.18
CDH1-213ENST00000612417 MARSP56192 900 aaKnown RBP16.2■□□□□ 0.18
CDH1-213ENST00000612417 ASTE1Q2TB18 679 aaPredicted RBP16.2■□□□□ 0.18
CDH1-213ENST00000612417 FAM26FQ5R3K3 315 aa16.2■□□□□ 0.18
CDH1-213ENST00000612417 PDXDC1Q6P996 788 aa16.2■□□□□ 0.18
CDH1-213ENST00000612417 GLIS3Q8NEA6 775 aa16.2■□□□□ 0.18
CDH1-213ENST00000612417 RUBCNQ92622 972 aa16.2■□□□□ 0.18
CDH1-213ENST00000612417 ZFP91Q96JP5 570 aaPredicted RBP16.2■□□□□ 0.18
CDH1-213ENST00000612417 NUCKS1Q9H1E3 243 aaKnown RBP16.2■□□□□ 0.18
CDH1-213ENST00000612417 ADARB2Q9NS39 739 aaKnown RBP16.2■□□□□ 0.18
CDH1-213ENST00000612417 CYP3A7-CYP3A51PA0A087WV96 503 aa16.2■□□□□ 0.18
CDH1-213ENST00000612417 LRRIQ3A6PVS8 624 aaPredicted RBP16.2■□□□□ 0.18
CDH1-213ENST00000612417 PDE2AO00408 941 aaPredicted RBP16.2■□□□□ 0.18
CDH1-213ENST00000612417 MARCH6O60337 910 aa16.2■□□□□ 0.18
CDH1-213ENST00000612417 PLA2G6O60733 806 aa16.2■□□□□ 0.18
CDH1-213ENST00000612417 CYP3A7P24462 503 aa16.2■□□□□ 0.18
CDH1-213ENST00000612417 USP11P51784 963 aa16.2■□□□□ 0.18
CDH1-213ENST00000612417 PRKG1Q13976 671 aa16.2■□□□□ 0.18
CDH1-213ENST00000612417 SUPT20HL1Q3ZLR7 823 aa16.2■□□□□ 0.18
CDH1-213ENST00000612417 MUM1L1Q5H9M0 696 aa16.2■□□□□ 0.18
CDH1-213ENST00000612417 SCYL3Q8IZE3 742 aa16.2■□□□□ 0.18
CDH1-213ENST00000612417 NEK11Q8NG66 645 aa16.2■□□□□ 0.18
CDH1-213ENST00000612417 SYN2Q92777 582 aaPredicted RBP16.2■□□□□ 0.18
CDH1-213ENST00000612417 CAPZA3Q96KX2 299 aa16.2■□□□□ 0.18
CDH1-213ENST00000612417 MBOAT7Q96N66 472 aa16.2■□□□□ 0.18
CDH1-213ENST00000612417 KIAA1683Q9H0B3 1180 aa16.2■□□□□ 0.18
CDH1-213ENST00000612417 KCNMB3Q9NPA1 279 aa16.2■□□□□ 0.18
CDH1-213ENST00000612417 BMP2KQ9NSY1 1161 aaPredicted RBP16.2■□□□□ 0.18
CDH1-213ENST00000612417 PANK4Q9NVE7 773 aa16.2■□□□□ 0.18
CDH1-213ENST00000612417 PCDHA2Q9Y5H9 948 aa16.2■□□□□ 0.18
CDH1-213ENST00000612417 PPP2R3BQ9Y5P8 575 aa16.2■□□□□ 0.18
CDH1-213ENST00000612417 CAPN6Q9Y6Q1 641 aa16.2■□□□□ 0.18
CDH1-213ENST00000612417 DOCK1Q14185 1865 aa16.2■□□□□ 0.18
CDH1-213ENST00000612417 RBAK-RBAKDNI3L0D1 243 aa16.19■□□□□ 0.18
CDH1-213ENST00000612417 MEIS2O14770 477 aa16.19■□□□□ 0.18
CDH1-213ENST00000612417 GNA14O95837 355 aa16.19■□□□□ 0.18
CDH1-213ENST00000612417 SPP2Q13103 211 aa16.19■□□□□ 0.18
CDH1-213ENST00000612417 MTMR2Q13614 643 aa16.19■□□□□ 0.18
CDH1-213ENST00000612417 MOXD1Q6UVY6 613 aa16.19■□□□□ 0.18
CDH1-213ENST00000612417 ILDR2Q71H61 639 aa16.19■□□□□ 0.18
CDH1-213ENST00000612417 RRAGAQ7L523 313 aa16.19■□□□□ 0.18
CDH1-213ENST00000612417 CREG2Q8IUH2 290 aa16.19■□□□□ 0.18
CDH1-213ENST00000612417 ZC3H3Q8IXZ2 948 aaKnown RBP16.19■□□□□ 0.18
CDH1-213ENST00000612417 LPAR1Q92633 364 aa16.19■□□□□ 0.18
CDH1-213ENST00000612417 ANO3Q9BYT9 981 aa16.19■□□□□ 0.18
CDH1-213ENST00000612417 TANGO6Q9C0B7 1094 aa16.19■□□□□ 0.18
CDH1-213ENST00000612417 RANBP17Q9H2T7 1088 aaKnown RBP16.19■□□□□ 0.18
CDH1-213ENST00000612417 DEF6Q9H4E7 631 aa16.19■□□□□ 0.18
CDH1-213ENST00000612417 JADE2Q9NQC1 790 aa16.19■□□□□ 0.18
CDH1-213ENST00000612417 SPDYE3A6NKU9 549 aa16.18■□□□□ 0.18
CDH1-213ENST00000612417 WDR46O15213 610 aaKnown RBP16.18■□□□□ 0.18
CDH1-213ENST00000612417 AKR1B10O60218 316 aa16.18■□□□□ 0.18
CDH1-213ENST00000612417 KCNMA1Q12791 1236 aa16.18■□□□□ 0.18
CDH1-213ENST00000612417 DGKZQ13574 1117 aa16.18■□□□□ 0.18
CDH1-213ENST00000612417 LRRC41Q15345 812 aa16.18■□□□□ 0.18
CDH1-213ENST00000612417 GPR162Q16538 588 aa16.18■□□□□ 0.18
CDH1-213ENST00000612417 DPY19L2Q6NUT2 758 aa16.18■□□□□ 0.18
CDH1-213ENST00000612417 CCDC65Q8IXS2 484 aa16.18■□□□□ 0.18
CDH1-213ENST00000612417 MMGT1Q8N4V1 131 aa16.18■□□□□ 0.18
CDH1-213ENST00000612417 CAGE1Q8TC20 777 aa16.18■□□□□ 0.18
CDH1-213ENST00000612417 DCPSQ96C86 337 aaKnown RBP16.18■□□□□ 0.18
CDH1-213ENST00000612417 CEP72Q9P209 647 aa16.18■□□□□ 0.18
CDH1-213ENST00000612417 VPS18Q9P253 973 aa16.18■□□□□ 0.18
CDH1-213ENST00000612417 ZNF112Q9UJU3 913 aa16.18■□□□□ 0.18
CDH1-213ENST00000612417 FRMD3A2A2Y4 597 aa16.18■□□□□ 0.18
CDH1-213ENST00000612417 ZNF185O15231 689 aa16.18■□□□□ 0.18
CDH1-213ENST00000612417 N4BP1O75113 896 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms