RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 GTPBP6O43824 516 aaPredicted RBP19.61■□□□□ 0.73
SREK1-216ENST00000612404 SMC2O95347 1197 aa19.61■□□□□ 0.73
SREK1-216ENST00000612404 CCDC192P0DO97 292 aa19.61■□□□□ 0.73
SREK1-216ENST00000612404 QARSP47897 775 aaKnown RBP19.61■□□□□ 0.73
SREK1-216ENST00000612404 AMPD3Q01432 767 aa19.61■□□□□ 0.73
SREK1-216ENST00000612404 CAP1Q01518 475 aa19.61■□□□□ 0.73
SREK1-216ENST00000612404 PRKCZQ05513 592 aa19.61■□□□□ 0.73
SREK1-216ENST00000612404 CUL4BQ13620 913 aa19.61■□□□□ 0.73
SREK1-216ENST00000612404 PRAMEF19Q5SWL8 479 aa19.61■□□□□ 0.73
SREK1-216ENST00000612404 METTL7BQ6UX53 244 aa19.61■□□□□ 0.73
SREK1-216ENST00000612404 PIGOQ8TEQ8 1089 aa19.61■□□□□ 0.73
SREK1-216ENST00000612404 COPS5Q92905 334 aa19.61■□□□□ 0.73
SREK1-216ENST00000612404 SMARCE1Q969G3 411 aa19.61■□□□□ 0.73
SREK1-216ENST00000612404 WRAP73Q9P2S5 460 aaPredicted RBP19.61■□□□□ 0.73
SREK1-216ENST00000612404 PLA2G4BP0C869 781 aa19.6■□□□□ 0.73
SREK1-216ENST00000612404 CELF3Q5SZQ8 465 aaKnown RBP19.6■□□□□ 0.73
SREK1-216ENST00000612404 MIS18BP1Q6P0N0 1132 aa19.6■□□□□ 0.73
SREK1-216ENST00000612404 BEGAINQ9BUH8 593 aa19.6■□□□□ 0.73
SREK1-216ENST00000612404 ZSWIM4Q9H7M6 989 aa19.6■□□□□ 0.73
SREK1-216ENST00000612404 SAGE1Q9NXZ1 904 aa19.6■□□□□ 0.73
SREK1-216ENST00000612404 BACH1O14867 736 aa19.6■□□□□ 0.73
SREK1-216ENST00000612404 MUTP22033 750 aa19.6■□□□□ 0.73
SREK1-216ENST00000612404 TYRO3Q06418 890 aa19.6■□□□□ 0.73
SREK1-216ENST00000612404 DPYDQ12882 1025 aa19.6■□□□□ 0.73
SREK1-216ENST00000612404 UGCGQ16739 394 aa19.6■□□□□ 0.73
SREK1-216ENST00000612404 ABHD15Q6UXT9 468 aa19.6■□□□□ 0.73
SREK1-216ENST00000612404 NACC1Q96RE7 527 aa19.6■□□□□ 0.73
SREK1-216ENST00000612404 GABBR1Q9UBS5 961 aa19.6■□□□□ 0.73
SREK1-216ENST00000612404 RBM47A0AV96 593 aaKnown RBP19.59■□□□□ 0.73
SREK1-216ENST00000612404 NOP56O00567 594 aaKnown RBP19.59■□□□□ 0.73
SREK1-216ENST00000612404 ZBTB39O15060 712 aa19.59■□□□□ 0.73
SREK1-216ENST00000612404 XRCC5P13010 732 aaKnown RBP19.59■□□□□ 0.73
SREK1-216ENST00000612404 PSMC5P62195 406 aa19.59■□□□□ 0.73
SREK1-216ENST00000612404 MAP2K1Q02750 393 aaPredicted RBP19.59■□□□□ 0.73
SREK1-216ENST00000612404 CCDC144BQ3MJ40 725 aa19.59■□□□□ 0.73
SREK1-216ENST00000612404 GJC2Q5T442 439 aaPredicted RBP19.59■□□□□ 0.73
SREK1-216ENST00000612404 ISM2Q6H9L7 571 aa19.59■□□□□ 0.73
SREK1-216ENST00000612404 SWSAP1Q6NVH7 229 aa19.59■□□□□ 0.73
SREK1-216ENST00000612404 TRMT1LQ7Z2T5 733 aaKnown RBP19.59■□□□□ 0.73
SREK1-216ENST00000612404 SPATA33Q96N06 139 aa19.59■□□□□ 0.73
SREK1-216ENST00000612404 TSPY26PQ9H489 355 aa19.59■□□□□ 0.73
SREK1-216ENST00000612404 TUBE1Q9UJT0 475 aa19.59■□□□□ 0.73
SREK1-216ENST00000612404 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.58■□□□□ 0.73
SREK1-216ENST00000612404 SUPT20HL2P0C7V6 817 aa19.58■□□□□ 0.73
SREK1-216ENST00000612404 PTGS1P23219 599 aa19.58■□□□□ 0.73
SREK1-216ENST00000612404 KCTD17Q8N5Z5 321 aa19.58■□□□□ 0.73
SREK1-216ENST00000612404 BHMT2Q9H2M3 363 aa19.58■□□□□ 0.73
SREK1-216ENST00000612404 MYL1P05976 194 aa19.58■□□□□ 0.72
SREK1-216ENST00000612404 HSDL1Q3SXM5 330 aa19.58■□□□□ 0.72
SREK1-216ENST00000612404 CCDC60Q8IWA6 550 aaPredicted RBP19.58■□□□□ 0.72
SREK1-216ENST00000612404 ATP6V0A1Q93050 837 aa19.58■□□□□ 0.72
SREK1-216ENST00000612404 FUCA2Q9BTY2 467 aa19.58■□□□□ 0.72
SREK1-216ENST00000612404 TRIM9Q9C026 710 aa19.58■□□□□ 0.72
SREK1-216ENST00000612404 LRRC27Q9C0I9 530 aa19.58■□□□□ 0.72
SREK1-216ENST00000612404 TSKSQ9UJT2 592 aa19.58■□□□□ 0.72
SREK1-216ENST00000612404 FKTNO75072 461 aa19.57■□□□□ 0.72
SREK1-216ENST00000612404 EYA4O95677 639 aa19.57■□□□□ 0.72
SREK1-216ENST00000612404 GH1P01241 217 aa19.57■□□□□ 0.72
SREK1-216ENST00000612404 HOXD10P28358 340 aa19.57■□□□□ 0.72
SREK1-216ENST00000612404 IQSEC1Q6DN90 963 aa19.57■□□□□ 0.72
SREK1-216ENST00000612404 DYMQ7RTS9 669 aa19.57■□□□□ 0.72
SREK1-216ENST00000612404 GPBP1Q86WP2 473 aa19.57■□□□□ 0.72
SREK1-216ENST00000612404 ZNF296Q8WUU4 475 aaPredicted RBP19.57■□□□□ 0.72
SREK1-216ENST00000612404 SEPT1Q8WYJ6 367 aa19.57■□□□□ 0.72
SREK1-216ENST00000612404 GSTTP1A0A1W2PQM5 241 aa19.57■□□□□ 0.72
SREK1-216ENST00000612404 MYMKA6NI61 221 aa19.57■□□□□ 0.72
SREK1-216ENST00000612404 ATG7O95352 703 aa19.57■□□□□ 0.72
SREK1-216ENST00000612404 TCF7P36402 384 aaPredicted RBP19.57■□□□□ 0.72
SREK1-216ENST00000612404 SLC12A3P55017 1021 aa19.57■□□□□ 0.72
SREK1-216ENST00000612404 ASIC1P78348 528 aa19.57■□□□□ 0.72
SREK1-216ENST00000612404 GSE1Q14687 1217 aa19.57■□□□□ 0.72
SREK1-216ENST00000612404 STX1AQ16623 288 aa19.57■□□□□ 0.72
SREK1-216ENST00000612404 NT5DC1Q5TFE4 455 aa19.57■□□□□ 0.72
SREK1-216ENST00000612404 GAS2L3Q86XJ1 694 aa19.57■□□□□ 0.72
SREK1-216ENST00000612404 SPATA20Q8TB22 786 aa19.57■□□□□ 0.72
SREK1-216ENST00000612404 ERO1AQ96HE7 468 aa19.57■□□□□ 0.72
SREK1-216ENST00000612404 C7orf25Q9BPX7 421 aa19.57■□□□□ 0.72
SREK1-216ENST00000612404 ZNF302Q9NR11 478 aa19.57■□□□□ 0.72
SREK1-216ENST00000612404 SMPD1P17405 629 aa19.56■□□□□ 0.72
SREK1-216ENST00000612404 SARSP49591 514 aaKnown RBP19.56■□□□□ 0.72
SREK1-216ENST00000612404 TNFAIP2Q03169 654 aa19.56■□□□□ 0.72
SREK1-216ENST00000612404 ARHGAP1Q07960 439 aa19.56■□□□□ 0.72
SREK1-216ENST00000612404 LAMC2Q13753 1193 aa19.56■□□□□ 0.72
SREK1-216ENST00000612404 DUSP28Q4G0W2 176 aa19.56■□□□□ 0.72
SREK1-216ENST00000612404 MFSD14CQ5VZR4 134 aa19.56■□□□□ 0.72
SREK1-216ENST00000612404 C4orf19Q8IY42 314 aa19.56■□□□□ 0.72
SREK1-216ENST00000612404 SYT2Q8N9I0 419 aaPredicted RBP19.56■□□□□ 0.72
SREK1-216ENST00000612404 TRIB2Q92519 343 aa19.56■□□□□ 0.72
SREK1-216ENST00000612404 DDX12PQ92771 950 aa19.56■□□□□ 0.72
SREK1-216ENST00000612404 GSDMAQ96QA5 445 aa19.56■□□□□ 0.72
SREK1-216ENST00000612404 GPR20Q99678 358 aa19.56■□□□□ 0.72
SREK1-216ENST00000612404 BMP2KQ9NSY1 1161 aaPredicted RBP19.56■□□□□ 0.72
SREK1-216ENST00000612404 SRRDQ9UH36 339 aa19.56■□□□□ 0.72
SREK1-216ENST00000612404 MAN1B1Q9UKM7 699 aa19.56■□□□□ 0.72
SREK1-216ENST00000612404 HTTP42858 3142 aa19.56■□□□□ 0.72
SREK1-216ENST00000612404 WDR81Q562E7 1941 aa19.56■□□□□ 0.72
SREK1-216ENST00000612404 DKC1O60832 514 aaKnown RBP eCLIP19.55■□□□□ 0.72
SREK1-216ENST00000612404 RPN1P04843 607 aaKnown RBP19.55■□□□□ 0.72
SREK1-216ENST00000612404 KRT18P05783 430 aaKnown RBP19.55■□□□□ 0.72
SREK1-216ENST00000612404 ZNF865P0CJ78 1059 aaPredicted RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms