RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 EIF2AK1Q9BQI3 630 aaKnown RBP14.33□□□□□ -0.12
TCF3-220ENST00000611869 IPO5O00410 1097 aaKnown RBP14.33□□□□□ -0.12
TCF3-220ENST00000611869 HEXIM1O94992 359 aaKnown RBP14.33□□□□□ -0.12
TCF3-220ENST00000611869 C10orf67Q8IYJ2 551 aa14.33□□□□□ -0.12
TCF3-220ENST00000611869 MRRFQ96E11 262 aaKnown RBP14.33□□□□□ -0.12
TCF3-220ENST00000611869 NT5C1BQ96P26 610 aa14.33□□□□□ -0.12
TCF3-220ENST00000611869 NALCNQ8IZF0 1738 aa14.33□□□□□ -0.12
TCF3-220ENST00000611869 CEP85LQ5SZL2 805 aa14.33□□□□□ -0.12
TCF3-220ENST00000611869 LDHDQ86WU2 507 aa14.33□□□□□ -0.12
TCF3-220ENST00000611869 CDAN1Q8IWY9 1227 aa14.33□□□□□ -0.12
TCF3-220ENST00000611869 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.33□□□□□ -0.12
TCF3-220ENST00000611869 TMEM206Q9H813 350 aa14.33□□□□□ -0.12
TCF3-220ENST00000611869 EPB41L5Q9HCM4 733 aa14.33□□□□□ -0.12
TCF3-220ENST00000611869 KCNG1Q9UIX4 513 aa14.33□□□□□ -0.12
TCF3-220ENST00000611869 CAPN11Q9UMQ6 739 aa14.33□□□□□ -0.12
TCF3-220ENST00000611869 KCNJ6P48051 423 aa14.32□□□□□ -0.12
TCF3-220ENST00000611869 SF3A3Q12874 501 aaKnown RBP eCLIP14.32□□□□□ -0.121e-6■■■□□ 15.6
TCF3-220ENST00000611869 PADI6Q6TGC4 694 aa14.32□□□□□ -0.12
TCF3-220ENST00000611869 SLC7A3Q8WY07 619 aa14.32□□□□□ -0.12
TCF3-220ENST00000611869 DCPSQ96C86 337 aaKnown RBP14.32□□□□□ -0.12
TCF3-220ENST00000611869 CEP72Q9P209 647 aa14.32□□□□□ -0.12
TCF3-220ENST00000611869 PRR12Q9ULL5 1215 aa14.32□□□□□ -0.12
TCF3-220ENST00000611869 ELOA2Q8IYF1 753 aaPredicted RBP14.32□□□□□ -0.12
TCF3-220ENST00000611869 STMN4Q9H169 189 aaPredicted RBP14.32□□□□□ -0.12
TCF3-220ENST00000611869 ZHX2Q9Y6X8 837 aa14.32□□□□□ -0.12
TCF3-220ENST00000611869 CTNNA1P35221 906 aaKnown RBP14.32□□□□□ -0.12
TCF3-220ENST00000611869 ATP1A2P50993 1020 aa14.32□□□□□ -0.12
TCF3-220ENST00000611869 WRNIP1Q96S55 665 aa14.32□□□□□ -0.12
TCF3-220ENST00000611869 FEM1BQ9UK73 627 aa14.32□□□□□ -0.12
TCF3-220ENST00000611869 FOXP2O15409 715 aa14.31□□□□□ -0.12
TCF3-220ENST00000611869 SRGNP10124 158 aa14.31□□□□□ -0.12
TCF3-220ENST00000611869 NAALADL2Q58DX5 795 aa14.31□□□□□ -0.12
TCF3-220ENST00000611869 UHMK1Q8TAS1 419 aaKnown RBP14.31□□□□□ -0.12
TCF3-220ENST00000611869 IGBP1P78318 339 aa14.31□□□□□ -0.12
TCF3-220ENST00000611869 CEP55Q53EZ4 464 aa14.31□□□□□ -0.12
TCF3-220ENST00000611869 OTUD6BQ8N6M0 293 aa14.31□□□□□ -0.12
TCF3-220ENST00000611869 PRPF38AQ8NAV1 312 aaKnown RBP14.31□□□□□ -0.12
TCF3-220ENST00000611869 VTI1AQ96AJ9 217 aa14.31□□□□□ -0.12
TCF3-220ENST00000611869 RAB17Q9H0T7 212 aa14.31□□□□□ -0.12
TCF3-220ENST00000611869 TRIM10Q9UDY6 481 aa14.31□□□□□ -0.12
TCF3-220ENST00000611869 MED1Q15648 1581 aaPredicted RBP14.31□□□□□ -0.12
TCF3-220ENST00000611869 A0A087X0B3 334 aa14.31□□□□□ -0.12
TCF3-220ENST00000611869 ESYT2A0FGR8 921 aa14.31□□□□□ -0.12
TCF3-220ENST00000611869 HOXA7P31268 230 aaPredicted RBP14.31□□□□□ -0.12
TCF3-220ENST00000611869 KCTD16Q68DU8 428 aa14.31□□□□□ -0.12
TCF3-220ENST00000611869 RUFY4Q6ZNE9 571 aa14.31□□□□□ -0.12
TCF3-220ENST00000611869 NYAP1Q6ZVC0 841 aa14.31□□□□□ -0.12
TCF3-220ENST00000611869 CCDC91Q7Z6B0 441 aa14.31□□□□□ -0.12
TCF3-220ENST00000611869 MICALL1Q8N3F8 863 aa14.31□□□□□ -0.12
TCF3-220ENST00000611869 LXNQ9BS40 222 aa14.31□□□□□ -0.12
TCF3-220ENST00000611869 MRFAP1Q9Y605 127 aa14.31□□□□□ -0.12
TCF3-220ENST00000611869 KLK7P49862 253 aa14.31□□□□□ -0.12
TCF3-220ENST00000611869 ZBTB8OSQ8IWT0 167 aa14.31□□□□□ -0.12
TCF3-220ENST00000611869 DAGLBQ8NCG7 672 aa14.31□□□□□ -0.12
TCF3-220ENST00000611869 FAN1Q9Y2M0 1017 aa14.31□□□□□ -0.12
TCF3-220ENST00000611869 NMT1P30419 496 aaKnown RBP14.3□□□□□ -0.12
TCF3-220ENST00000611869 MFAP3P55082 362 aa14.3□□□□□ -0.12
TCF3-220ENST00000611869 SUPT20HL1Q3ZLR7 823 aa14.3□□□□□ -0.12
TCF3-220ENST00000611869 ST7Q9NRC1 585 aa14.3□□□□□ -0.12
TCF3-220ENST00000611869 TYW1Q9NV66 732 aaKnown RBP14.3□□□□□ -0.12
TCF3-220ENST00000611869 DNAJC12Q9UKB3 198 aa14.3□□□□□ -0.12
TCF3-220ENST00000611869 PALMO75781 387 aa14.3□□□□□ -0.12
TCF3-220ENST00000611869 IL1R1P14778 569 aa14.3□□□□□ -0.12
TCF3-220ENST00000611869 SMARCA1P28370 1054 aa14.3□□□□□ -0.12
TCF3-220ENST00000611869 CCND2P30279 289 aa14.3□□□□□ -0.12
TCF3-220ENST00000611869 GCLMP48507 274 aa14.3□□□□□ -0.12
TCF3-220ENST00000611869 RASA3Q14644 834 aa14.3□□□□□ -0.12
TCF3-220ENST00000611869 CASP8Q14790 479 aa14.3□□□□□ -0.12
TCF3-220ENST00000611869 ZSCAN26Q16670 478 aa14.3□□□□□ -0.12
TCF3-220ENST00000611869 NRBP2Q9NSY0 501 aa14.3□□□□□ -0.12
TCF3-220ENST00000611869 VIRMAQ69YN4 1812 aaKnown RBP14.3□□□□□ -0.12
TCF3-220ENST00000611869 H0YCG3 227 aa14.3□□□□□ -0.12
TCF3-220ENST00000611869 ATP8B1O43520 1251 aa14.3□□□□□ -0.12
TCF3-220ENST00000611869 NCK2O43639 380 aa14.3□□□□□ -0.12
TCF3-220ENST00000611869 ENTPD3O75355 529 aa14.3□□□□□ -0.12
TCF3-220ENST00000611869 TADA3O75528 432 aa14.3□□□□□ -0.12
TCF3-220ENST00000611869 TRIM49P0CI25 452 aa14.3□□□□□ -0.12
TCF3-220ENST00000611869 TRIM49CP0CI26 452 aa14.3□□□□□ -0.12
TCF3-220ENST00000611869 SEMA3FQ13275 785 aa14.3□□□□□ -0.12
TCF3-220ENST00000611869 PRMT6Q96LA8 375 aaPredicted RBP14.3□□□□□ -0.12
TCF3-220ENST00000611869 RNF146Q9NTX7 359 aa14.3□□□□□ -0.12
TCF3-220ENST00000611869 CYTH3O43739 400 aa14.29□□□□□ -0.12
TCF3-220ENST00000611869 SNRNP48Q6IEG0 339 aaKnown RBP14.29□□□□□ -0.12
TCF3-220ENST00000611869 CC2D1AQ6P1N0 951 aaPredicted RBP14.29□□□□□ -0.12
TCF3-220ENST00000611869 PDXDC2PQ6P474 469 aa14.29□□□□□ -0.12
TCF3-220ENST00000611869 ZNF653Q96CK0 615 aa14.29□□□□□ -0.12
TCF3-220ENST00000611869 TMEM39BQ9GZU3 492 aa14.29□□□□□ -0.12
TCF3-220ENST00000611869 EIF3CLB5ME19 914 aaKnown RBP14.29□□□□□ -0.12
TCF3-220ENST00000611869 ATP1A1P05023 1023 aaKnown RBP14.29□□□□□ -0.12
TCF3-220ENST00000611869 PIK3CAP42336 1068 aa14.29□□□□□ -0.12
TCF3-220ENST00000611869 PTK2Q05397 1052 aa14.29□□□□□ -0.12
TCF3-220ENST00000611869 DDR1Q08345 913 aa14.29□□□□□ -0.12
TCF3-220ENST00000611869 PHLDB2Q86SQ0 1253 aa14.29□□□□□ -0.12
TCF3-220ENST00000611869 EIF3CQ99613 913 aaKnown RBP14.29□□□□□ -0.12
TCF3-220ENST00000611869 TRIM6Q9C030 488 aaPredicted RBP14.29□□□□□ -0.12
TCF3-220ENST00000611869 MED4Q9NPJ6 270 aa14.29□□□□□ -0.12
TCF3-220ENST00000611869 ZNF70Q9UC06 446 aaPredicted RBP14.29□□□□□ -0.12
TCF3-220ENST00000611869 TFR2Q9UP52 801 aa14.29□□□□□ -0.12
TCF3-220ENST00000611869 DDTLA6NHG4 134 aaPredicted RBP14.29□□□□□ -0.12
TCF3-220ENST00000611869 NSFP46459 744 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms