RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 KRT76Q01546 638 aa29.45■■■□□ 2.31
VEGFA-226ENST00000611736 TMEM240Q5SV17 173 aa29.45■■■□□ 2.31
VEGFA-226ENST00000611736 LRCH2Q5VUJ6 765 aa29.45■■■□□ 2.31
VEGFA-226ENST00000611736 MIS18BP1Q6P0N0 1132 aa29.45■■■□□ 2.31
VEGFA-226ENST00000611736 SERINC5Q86VE9 423 aa29.45■■■□□ 2.31
VEGFA-226ENST00000611736 LMBR1Q8WVP7 490 aa29.45■■■□□ 2.31
VEGFA-226ENST00000611736 SLC5A5Q92911 643 aa29.45■■■□□ 2.31
VEGFA-226ENST00000611736 SLC37A4O43826 429 aa29.44■■■□□ 2.3
VEGFA-226ENST00000611736 IQCF3P0C7M6 154 aa29.44■■■□□ 2.3
VEGFA-226ENST00000611736 MCM2P49736 904 aa29.44■■■□□ 2.3
VEGFA-226ENST00000611736 TRIM71Q2Q1W2 868 aaKnown RBP29.44■■■□□ 2.3
VEGFA-226ENST00000611736 LRIT3Q3SXY7 679 aa29.44■■■□□ 2.3
VEGFA-226ENST00000611736 ZNF365Q70YC5 407 aa29.44■■■□□ 2.3
VEGFA-226ENST00000611736 PLPPR4Q7Z2D5 763 aa29.44■■■□□ 2.3
VEGFA-226ENST00000611736 DEFB128Q7Z7B8 93 aa29.44■■■□□ 2.3
VEGFA-226ENST00000611736 CCDC60Q8IWA6 550 aaPredicted RBP29.44■■■□□ 2.3
VEGFA-226ENST00000611736 AFAP1L1Q8TED9 768 aa29.44■■■□□ 2.3
VEGFA-226ENST00000611736 TRPC6Q9Y210 931 aa29.44■■■□□ 2.3
VEGFA-226ENST00000611736 NRCAMQ92823 1304 aa29.44■■■□□ 2.3
VEGFA-226ENST00000611736 MYH9P35579 1960 aaKnown RBP29.43■■■□□ 2.3
VEGFA-226ENST00000611736 CCNT1O60563 726 aaKnown RBP29.43■■■□□ 2.3
VEGFA-226ENST00000611736 CKBP12277 381 aa29.43■■■□□ 2.3
VEGFA-226ENST00000611736 SAFBQ15424 915 aaKnown RBP eCLIP29.43■■■□□ 2.3
VEGFA-226ENST00000611736 GRIK4Q16099 956 aa29.43■■■□□ 2.3
VEGFA-226ENST00000611736 FAM160B1Q5W0V3 765 aa29.43■■■□□ 2.3
VEGFA-226ENST00000611736 PSRC1Q6PGN9 363 aaPredicted RBP29.43■■■□□ 2.3
VEGFA-226ENST00000611736 LRCH3Q96II8 777 aa29.43■■■□□ 2.3
VEGFA-226ENST00000611736 RIT2Q99578 217 aa29.43■■■□□ 2.3
VEGFA-226ENST00000611736 TEKT3Q9BXF9 490 aa29.43■■■□□ 2.3
VEGFA-226ENST00000611736 SAMM50Q9Y512 469 aa29.43■■■□□ 2.3
VEGFA-226ENST00000611736 IGKV6D-21A0A0A0MT36 114 aa29.42■■■□□ 2.3
VEGFA-226ENST00000611736 CHMP2AO43633 222 aa29.42■■■□□ 2.3
VEGFA-226ENST00000611736 SELPP16109 830 aa29.42■■■□□ 2.3
VEGFA-226ENST00000611736 GCFC2P16383 781 aaKnown RBP29.42■■■□□ 2.3
VEGFA-226ENST00000611736 RBL2Q08999 1139 aa29.42■■■□□ 2.3
VEGFA-226ENST00000611736 PLCB4Q15147 1175 aa29.42■■■□□ 2.3
VEGFA-226ENST00000611736 SWSAP1Q6NVH7 229 aa29.42■■■□□ 2.3
VEGFA-226ENST00000611736 LRRC8DQ7L1W4 858 aa29.42■■■□□ 2.3
VEGFA-226ENST00000611736 SMAP1Q8IYB5 467 aaPredicted RBP29.42■■■□□ 2.3
VEGFA-226ENST00000611736 RPUSD2Q8IZ73 545 aaKnown RBP29.42■■■□□ 2.3
VEGFA-226ENST00000611736 ETNPPLQ8TBG4 499 aa29.42■■■□□ 2.3
VEGFA-226ENST00000611736 ZNF302Q9NR11 478 aa29.42■■■□□ 2.3
VEGFA-226ENST00000611736 TET1Q8NFU7 2136 aa29.42■■■□□ 2.3
VEGFA-226ENST00000611736 THPOP40225 353 aa29.41■■■□□ 2.3
VEGFA-226ENST00000611736 IGBP1P78318 339 aa29.41■■■□□ 2.3
VEGFA-226ENST00000611736 ADAM17P78536 824 aa29.41■■■□□ 2.3
VEGFA-226ENST00000611736 PPP4R3AQ6IN85 833 aa29.41■■■□□ 2.3
VEGFA-226ENST00000611736 PDXDC2PQ6P474 469 aa29.41■■■□□ 2.3
VEGFA-226ENST00000611736 VWCEQ96DN2 955 aa29.41■■■□□ 2.3
VEGFA-226ENST00000611736 UNC45AQ9H3U1 944 aa29.41■■■□□ 2.3
VEGFA-226ENST00000611736 PCDHA10Q9Y5I2 948 aa29.41■■■□□ 2.3
VEGFA-226ENST00000611736 WDR64B1ANS9 1081 aa29.4■■■□□ 2.3
VEGFA-226ENST00000611736 PSMD10O75832 226 aa29.4■■■□□ 2.3
VEGFA-226ENST00000611736 PSAPP07602 524 aa29.4■■■□□ 2.3
VEGFA-226ENST00000611736 INSRRP14616 1297 aa29.4■■■□□ 2.3
VEGFA-226ENST00000611736 RFC2P35250 354 aa29.4■■■□□ 2.3
VEGFA-226ENST00000611736 ZNF618Q5T7W0 954 aa29.4■■■□□ 2.3
VEGFA-226ENST00000611736 NAP1L4Q99733 375 aaKnown RBP29.4■■■□□ 2.3
VEGFA-226ENST00000611736 DISC1Q9NRI5 854 aa29.4■■■□□ 2.3
VEGFA-226ENST00000611736 WDR81Q562E7 1941 aa29.39■■■□□ 2.3
VEGFA-226ENST00000611736 POTEB3A0JP26 581 aa29.39■■■□□ 2.3
VEGFA-226ENST00000611736 FGBP02675 491 aa29.39■■■□□ 2.3
VEGFA-226ENST00000611736 SLC26A2P50443 739 aa29.39■■■□□ 2.3
VEGFA-226ENST00000611736 POTEBQ6S5H4 581 aa29.39■■■□□ 2.3
VEGFA-226ENST00000611736 OTOP2Q7RTS6 562 aa29.39■■■□□ 2.3
VEGFA-226ENST00000611736 FBXO18Q8NFZ0 1043 aa29.39■■■□□ 2.3
VEGFA-226ENST00000611736 RUFY4Q6ZNE9 571 aa29.38■■■□□ 2.29
VEGFA-226ENST00000611736 POTEDQ86YR6 584 aa29.38■■■□□ 2.29
VEGFA-226ENST00000611736 CKAP2LQ8IYA6 745 aa29.38■■■□□ 2.29
VEGFA-226ENST00000611736 FTOQ9C0B1 505 aaKnown RBP eCLIP29.38■■■□□ 2.295e-19■□□□□ 10.1
VEGFA-226ENST00000611736 GABBR1Q9UBS5 961 aa29.38■■■□□ 2.29
VEGFA-226ENST00000611736 TUBE1Q9UJT0 475 aa29.38■■■□□ 2.29
VEGFA-226ENST00000611736 PFKMP08237 780 aa29.37■■■□□ 2.29
VEGFA-226ENST00000611736 MARCH8Q5T0T0 291 aa29.37■■■□□ 2.29
VEGFA-226ENST00000611736 TRAF7Q6Q0C0 670 aa29.37■■■□□ 2.29
VEGFA-226ENST00000611736 TRMT1LQ7Z2T5 733 aaKnown RBP29.37■■■□□ 2.29
VEGFA-226ENST00000611736 ATP8B4Q8TF62 1192 aa29.37■■■□□ 2.29
VEGFA-226ENST00000611736 TRAPPC12Q8WVT3 735 aa29.37■■■□□ 2.29
VEGFA-226ENST00000611736 HERVK_113Q902F9 699 aa29.37■■■□□ 2.29
VEGFA-226ENST00000611736 TNPO1Q92973 898 aaKnown RBP29.37■■■□□ 2.29
VEGFA-226ENST00000611736 ZBTB10Q96DT7 871 aa29.37■■■□□ 2.29
VEGFA-226ENST00000611736 KCNMB3Q9NPA1 279 aa29.37■■■□□ 2.29
VEGFA-226ENST00000611736 RRN3P2A6NIE6 340 aa29.36■■■□□ 2.29
VEGFA-226ENST00000611736 RBAK-RBAKDNI3L0D1 243 aa29.36■■■□□ 2.29
VEGFA-226ENST00000611736 MARCH6O60337 910 aa29.36■■■□□ 2.29
VEGFA-226ENST00000611736 CTSHP09668 335 aa29.36■■■□□ 2.29
VEGFA-226ENST00000611736 ATP4AP20648 1035 aa29.36■■■□□ 2.29
VEGFA-226ENST00000611736 JAK3P52333 1124 aa29.36■■■□□ 2.29
VEGFA-226ENST00000611736 MIER3Q7Z3K6 550 aa29.36■■■□□ 2.29
VEGFA-226ENST00000611736 MAFBQ9Y5Q3 323 aaPredicted RBP29.36■■■□□ 2.29
VEGFA-226ENST00000611736 MBLAC1A4D2B0 266 aaPredicted RBP29.35■■■□□ 2.29
VEGFA-226ENST00000611736 WNT7AO00755 349 aa29.35■■■□□ 2.29
VEGFA-226ENST00000611736 HBP1O60381 514 aa29.35■■■□□ 2.29
VEGFA-226ENST00000611736 SFNP31947 248 aa29.35■■■□□ 2.29
VEGFA-226ENST00000611736 GNL2Q13823 731 aaKnown RBP29.35■■■□□ 2.29
VEGFA-226ENST00000611736 GPNMBQ14956 572 aa29.35■■■□□ 2.29
VEGFA-226ENST00000611736 FAM20AQ96MK3 541 aa29.35■■■□□ 2.29
VEGFA-226ENST00000611736 FOXP1Q9H334 677 aaPredicted RBP29.35■■■□□ 2.29
VEGFA-226ENST00000611736 CXXC1Q9P0U4 656 aaPredicted RBP29.35■■■□□ 2.29
VEGFA-226ENST00000611736 KIF3AQ9Y496 699 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms