RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 ADAM9Q13443 819 aa16.55■□□□□ 0.24
PCDHGB1-202ENST00000611598 DPY19L2P1Q6NXN4 242 aa16.55■□□□□ 0.24
PCDHGB1-202ENST00000611598 ANKIB1Q9P2G1 1089 aa16.55■□□□□ 0.24
PCDHGB1-202ENST00000611598 AMACRQ9UHK6 382 aa16.55■□□□□ 0.24
PCDHGB1-202ENST00000611598 KIAA1024Q9UPX6 916 aa16.55■□□□□ 0.24
PCDHGB1-202ENST00000611598 DAPK3O43293 454 aa16.55■□□□□ 0.24
PCDHGB1-202ENST00000611598 TOM1O60784 492 aa16.55■□□□□ 0.24
PCDHGB1-202ENST00000611598 TM4SF1P30408 202 aa16.55■□□□□ 0.24
PCDHGB1-202ENST00000611598 CASP5P51878 434 aa16.55■□□□□ 0.24
PCDHGB1-202ENST00000611598 CUL1Q13616 776 aa16.55■□□□□ 0.24
PCDHGB1-202ENST00000611598 ACTRT1Q8TDG2 376 aa16.55■□□□□ 0.24
PCDHGB1-202ENST00000611598 ZHX3Q9H4I2 956 aa16.55■□□□□ 0.24
PCDHGB1-202ENST00000611598 GPCPD1Q9NPB8 672 aa16.55■□□□□ 0.24
PCDHGB1-202ENST00000611598 NAGPAQ9UK23 515 aa16.55■□□□□ 0.24
PCDHGB1-202ENST00000611598 POTEB3A0JP26 581 aa16.54■□□□□ 0.24
PCDHGB1-202ENST00000611598 GMNCA6NCL1 334 aa16.54■□□□□ 0.24
PCDHGB1-202ENST00000611598 POTECB2RU33 542 aa16.54■□□□□ 0.24
PCDHGB1-202ENST00000611598 UBAP1LF5GYI3 381 aa16.54■□□□□ 0.24
PCDHGB1-202ENST00000611598 TRAPPC3O43617 180 aa16.54■□□□□ 0.24
PCDHGB1-202ENST00000611598 PPP1R11O60927 126 aaPredicted RBP16.54■□□□□ 0.24
PCDHGB1-202ENST00000611598 POTEBQ6S5H4 581 aa16.54■□□□□ 0.24
PCDHGB1-202ENST00000611598 GPBP1Q86WP2 473 aa16.54■□□□□ 0.24
PCDHGB1-202ENST00000611598 RBM46Q8TBY0 533 aaKnown RBP16.54■□□□□ 0.24
PCDHGB1-202ENST00000611598 OSBPL7Q9BZF2 842 aa16.54■□□□□ 0.24
PCDHGB1-202ENST00000611598 ZNF287Q9HBT7 754 aa16.54■□□□□ 0.24
PCDHGB1-202ENST00000611598 EMILIN3Q9NT22 766 aa16.54■□□□□ 0.24
PCDHGB1-202ENST00000611598 AJAP1Q9UKB5 411 aaPredicted RBP16.54■□□□□ 0.24
PCDHGB1-202ENST00000611598 COL14A1Q05707 1796 aaKnown RBP16.54■□□□□ 0.24
PCDHGB1-202ENST00000611598 TMCO5BA8MYB1 307 aa16.54■□□□□ 0.24
PCDHGB1-202ENST00000611598 BHMG1C9JSJ3 638 aaPredicted RBP16.54■□□□□ 0.24
PCDHGB1-202ENST00000611598 PGRMC1O00264 195 aaKnown RBP16.54■□□□□ 0.24
PCDHGB1-202ENST00000611598 CES2O00748 559 aa16.54■□□□□ 0.24
PCDHGB1-202ENST00000611598 RASSF9O75901 435 aa16.54■□□□□ 0.24
PCDHGB1-202ENST00000611598 GNA14O95837 355 aa16.54■□□□□ 0.24
PCDHGB1-202ENST00000611598 SMARCA1P28370 1054 aa16.54■□□□□ 0.24
PCDHGB1-202ENST00000611598 MAP2K2P36507 400 aa16.54■□□□□ 0.24
PCDHGB1-202ENST00000611598 GSTO1P78417 241 aa16.54■□□□□ 0.24
PCDHGB1-202ENST00000611598 DDR1Q08345 913 aa16.54■□□□□ 0.24
PCDHGB1-202ENST00000611598 TEX11Q8IYF3 940 aa16.54■□□□□ 0.24
PCDHGB1-202ENST00000611598 ARFGAP2Q8N6H7 521 aa16.54■□□□□ 0.24
PCDHGB1-202ENST00000611598 LRRC45Q96CN5 670 aa16.54■□□□□ 0.24
PCDHGB1-202ENST00000611598 PBKQ96KB5 322 aa16.54■□□□□ 0.24
PCDHGB1-202ENST00000611598 SPAG5Q96R06 1193 aa16.54■□□□□ 0.24
PCDHGB1-202ENST00000611598 CELF4Q9BZC1 486 aaKnown RBP16.54■□□□□ 0.24
PCDHGB1-202ENST00000611598 SLC40A1Q9NP59 571 aa16.54■□□□□ 0.24
PCDHGB1-202ENST00000611598 KLC4Q9NSK0 619 aa16.54■□□□□ 0.24
PCDHGB1-202ENST00000611598 HDAC9Q9UKV0 1011 aa16.54■□□□□ 0.24
PCDHGB1-202ENST00000611598 NOVA2Q9UNW9 492 aaKnown RBP16.54■□□□□ 0.24
PCDHGB1-202ENST00000611598 FAM170AA1A519 330 aa16.53■□□□□ 0.24
PCDHGB1-202ENST00000611598 BTNL10A8MVZ5 291 aa16.53■□□□□ 0.24
PCDHGB1-202ENST00000611598 KRIT1O00522 736 aa16.53■□□□□ 0.24
PCDHGB1-202ENST00000611598 MARCH6O60337 910 aa16.53■□□□□ 0.24
PCDHGB1-202ENST00000611598 PLA2G4BP0C869 781 aa16.53■□□□□ 0.24
PCDHGB1-202ENST00000611598 UCHL3P15374 230 aa16.53■□□□□ 0.24
PCDHGB1-202ENST00000611598 NR2F2P24468 414 aa16.53■□□□□ 0.24
PCDHGB1-202ENST00000611598 SMTNP53814 917 aa16.53■□□□□ 0.24
PCDHGB1-202ENST00000611598 NFIXQ14938 502 aa16.53■□□□□ 0.24
PCDHGB1-202ENST00000611598 ODF2Q5BJF6 829 aa16.53■□□□□ 0.24
PCDHGB1-202ENST00000611598 ALKBH5Q6P6C2 394 aaKnown RBP16.53■□□□□ 0.24
PCDHGB1-202ENST00000611598 CCDC65Q8IXS2 484 aa16.53■□□□□ 0.24
PCDHGB1-202ENST00000611598 TPCN2Q8NHX9 752 aa16.53■□□□□ 0.24
PCDHGB1-202ENST00000611598 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.53■□□□□ 0.24
PCDHGB1-202ENST00000611598 GGA2Q9UJY4 613 aa16.53■□□□□ 0.24
PCDHGB1-202ENST00000611598 PCDHA12Q9UN75 941 aa16.53■□□□□ 0.24
PCDHGB1-202ENST00000611598 DNM1LO00429 736 aa16.53■□□□□ 0.24
PCDHGB1-202ENST00000611598 TTI1O43156 1089 aa16.53■□□□□ 0.24
PCDHGB1-202ENST00000611598 CYP11B2P19099 503 aa16.53■□□□□ 0.24
PCDHGB1-202ENST00000611598 SETQ01105 290 aaPredicted RBP16.53■□□□□ 0.24
PCDHGB1-202ENST00000611598 SEPT2Q15019 361 aa16.53■□□□□ 0.24
PCDHGB1-202ENST00000611598 CCDC121Q6ZUS5 278 aa16.53■□□□□ 0.24
PCDHGB1-202ENST00000611598 EIF1ADQ8N9N8 165 aaKnown RBP16.53■□□□□ 0.24
PCDHGB1-202ENST00000611598 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.53■□□□□ 0.24
PCDHGB1-202ENST00000611598 ZKSCAN4Q969J2 545 aaPredicted RBP16.53■□□□□ 0.24
PCDHGB1-202ENST00000611598 BMP2KQ9NSY1 1161 aaPredicted RBP16.53■□□□□ 0.24
PCDHGB1-202ENST00000611598 SRRM3A6NNA2 597 aaPredicted RBP16.52■□□□□ 0.24
PCDHGB1-202ENST00000611598 BYSLQ13895 437 aaKnown RBP16.52■□□□□ 0.24
PCDHGB1-202ENST00000611598 SETDB2Q96T68 719 aa16.52■□□□□ 0.24
PCDHGB1-202ENST00000611598 DPH5Q9H2P9 285 aa16.52■□□□□ 0.24
PCDHGB1-202ENST00000611598 LEMD3Q9Y2U8 911 aa16.52■□□□□ 0.24
PCDHGB1-202ENST00000611598 WNK3Q9BYP7 1800 aa16.52■□□□□ 0.24
PCDHGB1-202ENST00000611598 STAT3P40763 770 aa16.52■□□□□ 0.23
PCDHGB1-202ENST00000611598 MAGOHP61326 146 aaKnown RBP16.52■□□□□ 0.23
PCDHGB1-202ENST00000611598 PPP2R2AP63151 447 aa16.52■□□□□ 0.23
PCDHGB1-202ENST00000611598 CHADLQ6NUI6 762 aa16.52■□□□□ 0.23
PCDHGB1-202ENST00000611598 TMC3Q7Z5M5 1100 aa16.52■□□□□ 0.23
PCDHGB1-202ENST00000611598 ZC3H3Q8IXZ2 948 aaKnown RBP16.52■□□□□ 0.23
PCDHGB1-202ENST00000611598 RAPGEF5Q92565 580 aa16.52■□□□□ 0.23
PCDHGB1-202ENST00000611598 MAGOHBQ96A72 148 aaKnown RBP16.52■□□□□ 0.23
PCDHGB1-202ENST00000611598 CXorf56Q9H5V9 222 aa16.52■□□□□ 0.23
PCDHGB1-202ENST00000611598 CETN3O15182 167 aa16.51■□□□□ 0.23
PCDHGB1-202ENST00000611598 BIRC3Q13489 604 aa16.51■□□□□ 0.23
PCDHGB1-202ENST00000611598 ARSHQ5FYA8 562 aa16.51■□□□□ 0.23
PCDHGB1-202ENST00000611598 TTBK2Q6IQ55 1244 aa16.51■□□□□ 0.23
PCDHGB1-202ENST00000611598 GJB7Q6PEY0 223 aa16.51■□□□□ 0.23
PCDHGB1-202ENST00000611598 PEX26Q7Z412 305 aa16.51■□□□□ 0.23
PCDHGB1-202ENST00000611598 CALR3Q96L12 384 aaKnown RBP16.51■□□□□ 0.23
PCDHGB1-202ENST00000611598 CCDC114Q96M63 670 aa16.51■□□□□ 0.23
PCDHGB1-202ENST00000611598 CDK5RAP2Q96SN8 1893 aa16.51■□□□□ 0.23
PCDHGB1-202ENST00000611598 PON1P27169 355 aa16.51■□□□□ 0.23
PCDHGB1-202ENST00000611598 HOXA7P31268 230 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms