RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 TYW1Q9NV66 732 aaKnown RBP11.5□□□□□ -0.57
PABPC1-224ENST00000610907 STK32BQ9NY57 414 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 KCND2Q9NZV8 630 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 TBC1D7Q9P0N9 293 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 ZNF219Q9P2Y4 722 aaPredicted RBP11.5□□□□□ -0.57
PABPC1-224ENST00000610907 SNX12Q9UMY4 172 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 BZW2Q9Y6E2 419 aaKnown RBP11.5□□□□□ -0.57
PABPC1-224ENST00000610907 EIF3DO15371 548 aaKnown RBP eCLIP11.5□□□□□ -0.57
PABPC1-224ENST00000610907 TBCAO75347 108 aaKnown RBP11.5□□□□□ -0.57
PABPC1-224ENST00000610907 PLEKP08567 350 aaPredicted RBP11.5□□□□□ -0.57
PABPC1-224ENST00000610907 RHOXF2BP0C7M4 288 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 NR2F2P24468 414 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 ANXA13P27216 316 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 EPS15P42566 896 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 SNAP25P60880 206 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 PSMC6P62333 389 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 KCNH2Q12809 1159 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 PABPC4Q13310 644 aaKnown RBP eCLIP11.5□□□□□ -0.571e-323■■■■□ 22
PABPC1-224ENST00000610907 SPDYE2Q495Y8 402 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 OTOP1Q7RTM1 612 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 KRT26Q7Z3Y9 468 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 TTLL6Q8N841 843 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 NOA1Q8NC60 698 aaKnown RBP11.5□□□□□ -0.57
PABPC1-224ENST00000610907 SMCR8Q8TEV9 937 aaPredicted RBP11.5□□□□□ -0.57
PABPC1-224ENST00000610907 SLC5A5Q92911 643 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 MMS19Q96T76 1030 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 RHOXF2Q9BQY4 288 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 LSM14BQ9BX40 385 aaKnown RBP11.5□□□□□ -0.57
PABPC1-224ENST00000610907 FGFBP2Q9BYJ0 223 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 WDR11Q9BZH6 1224 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 ACBD3Q9H3P7 528 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 VCPKMTQ9H867 229 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 JADE2Q9NQC1 790 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 HDAC6Q9UBN7 1215 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 RNF14Q9UBS8 474 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 SEL1LQ9UBV2 794 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 ARMCX3Q9UH62 379 aaPredicted RBP11.5□□□□□ -0.57
PABPC1-224ENST00000610907 FEM1BQ9UK73 627 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 FBXL5Q9UKA1 691 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 PRDM4Q9UKN5 801 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 ZBTB21Q9ULJ3 1066 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 DUSP10Q9Y6W6 482 aa11.5□□□□□ -0.57
PABPC1-224ENST00000610907 TNS1Q9HBL0 1735 aaKnown RBP11.49□□□□□ -0.57
PABPC1-224ENST00000610907 MACROD2A1Z1Q3 448 aa11.49□□□□□ -0.57
PABPC1-224ENST00000610907 TCP10L2B9ZVM9 353 aa11.49□□□□□ -0.57
PABPC1-224ENST00000610907 C21orf2O43822 256 aa11.49□□□□□ -0.57
PABPC1-224ENST00000610907 PSMD10O75832 226 aa11.49□□□□□ -0.57
PABPC1-224ENST00000610907 AFPP02771 609 aaKnown RBP11.49□□□□□ -0.57
PABPC1-224ENST00000610907 VSNL1P62760 191 aa11.49□□□□□ -0.57
PABPC1-224ENST00000610907 SETQ01105 290 aaPredicted RBP11.49□□□□□ -0.57
PABPC1-224ENST00000610907 MAP3K10Q02779 954 aa11.49□□□□□ -0.57
PABPC1-224ENST00000610907 ZNF771Q7L3S4 317 aaPredicted RBP11.49□□□□□ -0.57
PABPC1-224ENST00000610907 SFR1Q86XK3 245 aa11.49□□□□□ -0.57
PABPC1-224ENST00000610907 MMGT1Q8N4V1 131 aa11.49□□□□□ -0.57
PABPC1-224ENST00000610907 AGBL3Q8NEM8 1001 aa11.49□□□□□ -0.57
PABPC1-224ENST00000610907 UPF1Q92900 1129 aaKnown RBP eCLIP11.49□□□□□ -0.57
PABPC1-224ENST00000610907 NOX5Q96PH1 765 aa11.49□□□□□ -0.57
PABPC1-224ENST00000610907 ZHX3Q9H4I2 956 aa11.49□□□□□ -0.57
PABPC1-224ENST00000610907 VIPAS39Q9H9C1 493 aa11.49□□□□□ -0.57
PABPC1-224ENST00000610907 ABCB6Q9NP58 842 aa11.49□□□□□ -0.57
PABPC1-224ENST00000610907 TFR2Q9UP52 801 aa11.49□□□□□ -0.57
PABPC1-224ENST00000610907 HYOU1Q9Y4L1 999 aa11.49□□□□□ -0.57
PABPC1-224ENST00000610907 EP400Q96L91 3159 aa11.49□□□□□ -0.57
PABPC1-224ENST00000610907 UBE4BO95155 1302 aa11.48□□□□□ -0.57
PABPC1-224ENST00000610907 GTPBP10A4D1E9 387 aaKnown RBP11.48□□□□□ -0.57
PABPC1-224ENST00000610907 BTNL10A8MVZ5 291 aa11.48□□□□□ -0.57
PABPC1-224ENST00000610907 HOXA13P31271 388 aaPredicted RBP11.48□□□□□ -0.57
PABPC1-224ENST00000610907 ECE1P42892 770 aa11.48□□□□□ -0.57
PABPC1-224ENST00000610907 PRELPP51888 382 aa11.48□□□□□ -0.57
PABPC1-224ENST00000610907 POLR2FP61218 127 aaKnown RBP11.48□□□□□ -0.57
PABPC1-224ENST00000610907 CACNB1Q02641 598 aaPredicted RBP11.48□□□□□ -0.57
PABPC1-224ENST00000610907 SLC18A3Q16572 532 aa11.48□□□□□ -0.57
PABPC1-224ENST00000610907 CEP55Q53EZ4 464 aa11.48□□□□□ -0.57
PABPC1-224ENST00000610907 TDRD12Q587J7 1177 aaKnown RBP11.48□□□□□ -0.57
PABPC1-224ENST00000610907 LRCH2Q5VUJ6 765 aa11.48□□□□□ -0.57
PABPC1-224ENST00000610907 RINT1Q6NUQ1 792 aa11.48□□□□□ -0.57
PABPC1-224ENST00000610907 STXBP4Q6ZWJ1 553 aa11.48□□□□□ -0.57
PABPC1-224ENST00000610907 SPICE1Q8N0Z3 855 aa11.48□□□□□ -0.57
PABPC1-224ENST00000610907 SAMD3Q8N6K7 520 aa11.48□□□□□ -0.57
PABPC1-224ENST00000610907 CAGE1Q8TC20 777 aa11.48□□□□□ -0.57
PABPC1-224ENST00000610907 NEK9Q8TD19 979 aa11.48□□□□□ -0.57
PABPC1-224ENST00000610907 NACC1Q96RE7 527 aa11.48□□□□□ -0.57
PABPC1-224ENST00000610907 GANQ9H2C0 597 aa11.48□□□□□ -0.57
PABPC1-224ENST00000610907 BHMT2Q9H2M3 363 aa11.48□□□□□ -0.57
PABPC1-224ENST00000610907 DAAM1Q9Y4D1 1078 aa11.48□□□□□ -0.57
PABPC1-224ENST00000610907 CNTNAP1P78357 1384 aa11.48□□□□□ -0.57
PABPC1-224ENST00000610907 ATP8B3O60423 1300 aa11.47□□□□□ -0.57
PABPC1-224ENST00000610907 EML1O00423 815 aa11.47□□□□□ -0.57
PABPC1-224ENST00000610907 MEIS1O00470 390 aa11.47□□□□□ -0.57
PABPC1-224ENST00000610907 TLR2O60603 784 aa11.47□□□□□ -0.57
PABPC1-224ENST00000610907 SLITRK3O94933 977 aa11.47□□□□□ -0.57
PABPC1-224ENST00000610907 CFBP00751 764 aa11.47□□□□□ -0.57
PABPC1-224ENST00000610907 EPB41P11171 864 aaKnown RBP11.47□□□□□ -0.57
PABPC1-224ENST00000610907 XRCC5P13010 732 aaKnown RBP11.47□□□□□ -0.57
PABPC1-224ENST00000610907 OAS2P29728 719 aaKnown RBP11.47□□□□□ -0.57
PABPC1-224ENST00000610907 HOXD13P35453 343 aa11.47□□□□□ -0.57
PABPC1-224ENST00000610907 CAP2P40123 477 aa11.47□□□□□ -0.57
PABPC1-224ENST00000610907 CASP5P51878 434 aa11.47□□□□□ -0.57
PABPC1-224ENST00000610907 RAD51AP2Q09MP3 1159 aa11.47□□□□□ -0.57
PABPC1-224ENST00000610907 EPHA7Q15375 998 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms