RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 CXXC1Q9P0U4 656 aaPredicted RBP15.17■□□□□ 0.02
SENP3-209ENST00000610454 MSRAQ9UJ68 235 aa15.17■□□□□ 0.02
SENP3-209ENST00000610454 TUBE1Q9UJT0 475 aa15.17■□□□□ 0.02
SENP3-209ENST00000610454 MYH9P35579 1960 aaKnown RBP15.16■□□□□ 0.02
SENP3-209ENST00000610454 RRN3P2A6NIE6 340 aa15.16■□□□□ 0.02
SENP3-209ENST00000610454 GAS7O60861 476 aa15.16■□□□□ 0.02
SENP3-209ENST00000610454 BAIAP3O94812 1187 aa15.16■□□□□ 0.02
SENP3-209ENST00000610454 RPLP2P05387 115 aaKnown RBP15.16■□□□□ 0.02
SENP3-209ENST00000610454 PSAPP07602 524 aa15.16■□□□□ 0.02
SENP3-209ENST00000610454 KRT2P35908 639 aa15.16■□□□□ 0.02
SENP3-209ENST00000610454 RBM25P49756 843 aaKnown RBP15.16■□□□□ 0.02
SENP3-209ENST00000610454 HIC1Q14526 733 aa15.16■□□□□ 0.02
SENP3-209ENST00000610454 TRIM71Q2Q1W2 868 aaKnown RBP15.16■□□□□ 0.02
SENP3-209ENST00000610454 LRCH2Q5VUJ6 765 aa15.16■□□□□ 0.02
SENP3-209ENST00000610454 PDXDC2PQ6P474 469 aa15.16■□□□□ 0.02
SENP3-209ENST00000610454 CNKSR3Q6P9H4 555 aa15.16■□□□□ 0.02
SENP3-209ENST00000610454 NSUN7Q8NE18 718 aaKnown RBP15.16■□□□□ 0.02
SENP3-209ENST00000610454 WNT8BQ93098 351 aa15.16■□□□□ 0.02
SENP3-209ENST00000610454 ZNF302Q9NR11 478 aa15.16■□□□□ 0.02
SENP3-209ENST00000610454 SH2B1Q9NRF2 756 aaPredicted RBP15.16■□□□□ 0.02
SENP3-209ENST00000610454 TMEM265A0A087WTH1 108 aa15.15■□□□□ 0.02
SENP3-209ENST00000610454 POTEB3A0JP26 581 aa15.15■□□□□ 0.02
SENP3-209ENST00000610454 WDR64B1ANS9 1081 aa15.15■□□□□ 0.02
SENP3-209ENST00000610454 M0R2N6 131 aa15.15■□□□□ 0.02
SENP3-209ENST00000610454 MSH4O15457 936 aa15.15■□□□□ 0.02
SENP3-209ENST00000610454 ST18O60284 1047 aa15.15■□□□□ 0.02
SENP3-209ENST00000610454 DTNBO60941 627 aa15.15■□□□□ 0.02
SENP3-209ENST00000610454 ATG7O95352 703 aa15.15■□□□□ 0.02
SENP3-209ENST00000610454 CCNE2O96020 404 aa15.15■□□□□ 0.02
SENP3-209ENST00000610454 CTSHP09668 335 aa15.15■□□□□ 0.02
SENP3-209ENST00000610454 ATP2A2P16615 1042 aaKnown RBP15.15■□□□□ 0.02
SENP3-209ENST00000610454 RABEP1Q15276 862 aa15.15■□□□□ 0.02
SENP3-209ENST00000610454 INF2Q27J81 1249 aa15.15■□□□□ 0.02
SENP3-209ENST00000610454 LETM2Q2VYF4 491 aa15.15■□□□□ 0.02
SENP3-209ENST00000610454 POTEBQ6S5H4 581 aa15.15■□□□□ 0.02
SENP3-209ENST00000610454 MOXD1Q6UVY6 613 aa15.15■□□□□ 0.02
SENP3-209ENST00000610454 ABHD15Q6UXT9 468 aa15.15■□□□□ 0.02
SENP3-209ENST00000610454 NEK8Q86SG6 692 aa15.15■□□□□ 0.02
SENP3-209ENST00000610454 CCDC83Q8IWF9 413 aa15.15■□□□□ 0.02
SENP3-209ENST00000610454 TIFAQ96CG3 184 aa15.15■□□□□ 0.02
SENP3-209ENST00000610454 SLC9A7Q96T83 725 aa15.15■□□□□ 0.02
SENP3-209ENST00000610454 PCYT2Q99447 389 aa15.15■□□□□ 0.02
SENP3-209ENST00000610454 RIT2Q99578 217 aa15.15■□□□□ 0.02
SENP3-209ENST00000610454 NAP1L4Q99733 375 aaKnown RBP15.15■□□□□ 0.02
SENP3-209ENST00000610454 TEKT3Q9BXF9 490 aa15.15■□□□□ 0.02
SENP3-209ENST00000610454 PCDHA10Q9Y5I2 948 aa15.15■□□□□ 0.02
SENP3-209ENST00000610454 TET1Q8NFU7 2136 aa15.14■□□□□ 0.01
SENP3-209ENST00000610454 GRXCR1A8MXD5 290 aa15.14■□□□□ 0.01
SENP3-209ENST00000610454 M0QZ92 97 aa15.14■□□□□ 0.01
SENP3-209ENST00000610454 DHX15O43143 795 aaKnown RBP15.14■□□□□ 0.01
SENP3-209ENST00000610454 MARCH6O60337 910 aa15.14■□□□□ 0.01
SENP3-209ENST00000610454 HBP1O60381 514 aa15.14■□□□□ 0.01
SENP3-209ENST00000610454 JAK2O60674 1132 aa15.14■□□□□ 0.01
SENP3-209ENST00000610454 NBNO60934 754 aa15.14■□□□□ 0.01
SENP3-209ENST00000610454 EFCAB14O75071 495 aa15.14■□□□□ 0.01
SENP3-209ENST00000610454 TDP2O95551 362 aa15.14■□□□□ 0.01
SENP3-209ENST00000610454 INSRRP14616 1297 aa15.14■□□□□ 0.01
SENP3-209ENST00000610454 GCFC2P16383 781 aaKnown RBP15.14■□□□□ 0.01
SENP3-209ENST00000610454 FOSBP53539 338 aa15.14■□□□□ 0.01
SENP3-209ENST00000610454 IKBKEQ14164 716 aa15.14■□□□□ 0.01
SENP3-209ENST00000610454 PLCB4Q15147 1175 aa15.14■□□□□ 0.01
SENP3-209ENST00000610454 NPY5RQ15761 445 aa15.14■□□□□ 0.01
SENP3-209ENST00000610454 Q4G0T1 1027 aa15.14■□□□□ 0.01
SENP3-209ENST00000610454 SWSAP1Q6NVH7 229 aa15.14■□□□□ 0.01
SENP3-209ENST00000610454 PIK3AP1Q6ZUJ8 805 aa15.14■□□□□ 0.01
SENP3-209ENST00000610454 CCDC60Q8IWA6 550 aaPredicted RBP15.14■□□□□ 0.01
SENP3-209ENST00000610454 LENG9Q96B70 501 aa15.14■□□□□ 0.01
SENP3-209ENST00000610454 PBX4Q9BYU1 374 aa15.14■□□□□ 0.01
SENP3-209ENST00000610454 GJB4Q9NTQ9 266 aa15.14■□□□□ 0.01
SENP3-209ENST00000610454 MTMR10Q9NXD2 777 aa15.14■□□□□ 0.01
SENP3-209ENST00000610454 DDX25Q9UHL0 483 aaKnown RBP15.14■□□□□ 0.01
SENP3-209ENST00000610454 GBF1Q92538 1859 aa15.14■□□□□ 0.01
SENP3-209ENST00000610454 CYP3A7-CYP3A51PA0A087WV96 503 aa15.13■□□□□ 0.01
SENP3-209ENST00000610454 IGKV6D-21A0A0A0MT36 114 aa15.13■□□□□ 0.01
SENP3-209ENST00000610454 KIF28PB7ZC32 967 aa15.13■□□□□ 0.01
SENP3-209ENST00000610454 CHMP2AO43633 222 aa15.13■□□□□ 0.01
SENP3-209ENST00000610454 CXCL10P02778 98 aa15.13■□□□□ 0.01
SENP3-209ENST00000610454 FDPSP14324 419 aaKnown RBP15.13■□□□□ 0.01
SENP3-209ENST00000610454 CYP3A7P24462 503 aa15.13■□□□□ 0.01
SENP3-209ENST00000610454 SFNP31947 248 aa15.13■□□□□ 0.01
SENP3-209ENST00000610454 JAK3P52333 1124 aa15.13■□□□□ 0.01
SENP3-209ENST00000610454 ADAM17P78536 824 aa15.13■□□□□ 0.01
SENP3-209ENST00000610454 SAFBQ15424 915 aaKnown RBP eCLIP15.13■□□□□ 0.01
SENP3-209ENST00000610454 FAM184AQ8NB25 1140 aa15.13■□□□□ 0.01
SENP3-209ENST00000610454 IL27Q8NEV9 243 aa15.13■□□□□ 0.01
SENP3-209ENST00000610454 PHOSPHO2Q8TCD6 241 aa15.13■□□□□ 0.01
SENP3-209ENST00000610454 ATP8B4Q8TF62 1192 aa15.13■□□□□ 0.01
SENP3-209ENST00000610454 LLPHQ9BRT6 129 aaKnown RBP15.13■□□□□ 0.01
SENP3-209ENST00000610454 SLC28A3Q9HAS3 691 aa15.13■□□□□ 0.01
SENP3-209ENST00000610454 ABHD14A-ACY1A0A1B0GW23 586 aa15.12■□□□□ 0.01
SENP3-209ENST00000610454 MBLAC1A4D2B0 266 aaPredicted RBP15.12■□□□□ 0.01
SENP3-209ENST00000610454 CCNT1O60563 726 aaKnown RBP15.12■□□□□ 0.01
SENP3-209ENST00000610454 MMP1P03956 469 aa15.12■□□□□ 0.01
SENP3-209ENST00000610454 HMGN5P82970 282 aaKnown RBP15.12■□□□□ 0.01
SENP3-209ENST00000610454 RUFY4Q6ZNE9 571 aa15.12■□□□□ 0.01
SENP3-209ENST00000610454 TRMT1LQ7Z2T5 733 aaKnown RBP15.12■□□□□ 0.01
SENP3-209ENST00000610454 MIER3Q7Z3K6 550 aa15.12■□□□□ 0.01
SENP3-209ENST00000610454 OXER1Q8TDS5 423 aa15.12■□□□□ 0.01
SENP3-209ENST00000610454 DNAJB3Q8WWF6 145 aa15.12■□□□□ 0.01
SENP3-209ENST00000610454 BBXQ8WY36 941 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms