RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 FAM47CQ5HY64 1035 aa6.07□□□□□ -1.44
SMCHD1-213ENST00000609587 CDCA2Q69YH5 1023 aaPredicted RBP6.07□□□□□ -1.44
SMCHD1-213ENST00000609587 ZCCHC8Q6NZY4 707 aaKnown RBP6.07□□□□□ -1.44
SMCHD1-213ENST00000609587 KRT26Q7Z3Y9 468 aa6.07□□□□□ -1.44
SMCHD1-213ENST00000609587 AHI1Q8N157 1196 aa6.07□□□□□ -1.44
SMCHD1-213ENST00000609587 ZCRB1Q8TBF4 217 aaKnown RBP6.07□□□□□ -1.44
SMCHD1-213ENST00000609587 DVL3Q92997 716 aaPredicted RBP6.07□□□□□ -1.44
SMCHD1-213ENST00000609587 FBXW5Q969U6 566 aa6.07□□□□□ -1.44
SMCHD1-213ENST00000609587 KCNJ15Q99712 375 aa6.07□□□□□ -1.44
SMCHD1-213ENST00000609587 SSBP3Q9BWW4 388 aaPredicted RBP6.07□□□□□ -1.44
SMCHD1-213ENST00000609587 JAM3Q9BX67 310 aa6.07□□□□□ -1.44
SMCHD1-213ENST00000609587 CAAP1Q9H8G2 361 aa6.07□□□□□ -1.44
SMCHD1-213ENST00000609587 SAMD15Q9P1V8 674 aa6.07□□□□□ -1.44
SMCHD1-213ENST00000609587 SIT1Q9Y3P8 196 aa6.07□□□□□ -1.44
SMCHD1-213ENST00000609587 WNT9AO14904 365 aa6.06□□□□□ -1.44
SMCHD1-213ENST00000609587 GSTA4O15217 222 aa6.06□□□□□ -1.44
SMCHD1-213ENST00000609587 KPNA6O60684 536 aa6.06□□□□□ -1.44
SMCHD1-213ENST00000609587 NPTXRO95502 500 aa6.06□□□□□ -1.44
SMCHD1-213ENST00000609587 CKMP06732 381 aa6.06□□□□□ -1.44
SMCHD1-213ENST00000609587 POU3F2P20265 443 aaPredicted RBP6.06□□□□□ -1.44
SMCHD1-213ENST00000609587 IBSPP21815 317 aaPredicted RBP6.06□□□□□ -1.44
SMCHD1-213ENST00000609587 PMLP29590 882 aa6.06□□□□□ -1.44
SMCHD1-213ENST00000609587 DNM2P50570 870 aa6.06□□□□□ -1.44
SMCHD1-213ENST00000609587 ST5P78524 1137 aa6.06□□□□□ -1.44
SMCHD1-213ENST00000609587 CT47A1Q5JQC4 288 aaPredicted RBP6.06□□□□□ -1.44
SMCHD1-213ENST00000609587 PIK3R6Q5UE93 754 aa6.06□□□□□ -1.44
SMCHD1-213ENST00000609587 ABHD17CQ6PCB6 329 aa6.06□□□□□ -1.44
SMCHD1-213ENST00000609587 IGSF22Q8N9C0 903 aa6.06□□□□□ -1.44
SMCHD1-213ENST00000609587 GPATCH3Q96I76 525 aa6.06□□□□□ -1.44
SMCHD1-213ENST00000609587 WNK4Q96J92 1243 aa6.06□□□□□ -1.44
SMCHD1-213ENST00000609587 NOX5Q96PH1 765 aa6.06□□□□□ -1.44
SMCHD1-213ENST00000609587 CATSPERZQ9NTU4 200 aa6.06□□□□□ -1.44
SMCHD1-213ENST00000609587 SPATA6Q9NWH7 488 aaPredicted RBP6.06□□□□□ -1.44
SMCHD1-213ENST00000609587 NTMQ9P121 344 aa6.06□□□□□ -1.44
SMCHD1-213ENST00000609587 COQ6Q9Y2Z9 468 aa6.06□□□□□ -1.44
SMCHD1-213ENST00000609587 COL4A3BPQ9Y5P4 624 aa6.06□□□□□ -1.44
SMCHD1-213ENST00000609587 CCDC66A2RUB6 948 aa6.05□□□□□ -1.44
SMCHD1-213ENST00000609587 FAM83GA6ND36 823 aa6.05□□□□□ -1.44
SMCHD1-213ENST00000609587 PYGMP11217 842 aa6.05□□□□□ -1.44
SMCHD1-213ENST00000609587 GNAT1P11488 350 aa6.05□□□□□ -1.44
SMCHD1-213ENST00000609587 SARSP49591 514 aaKnown RBP6.05□□□□□ -1.44
SMCHD1-213ENST00000609587 PCBP1Q15365 356 aaKnown RBP eCLIP6.05□□□□□ -1.44
SMCHD1-213ENST00000609587 CHRNA2Q15822 529 aa6.05□□□□□ -1.44
SMCHD1-213ENST00000609587 C16orf59Q7L2K0 433 aa6.05□□□□□ -1.44
SMCHD1-213ENST00000609587 RNF180Q86T96 592 aa6.05□□□□□ -1.44
SMCHD1-213ENST00000609587 UBR7Q8N806 425 aa6.05□□□□□ -1.44
SMCHD1-213ENST00000609587 SH3RF3Q8TEJ3 882 aaPredicted RBP6.05□□□□□ -1.44
SMCHD1-213ENST00000609587 LEO1Q8WVC0 666 aaPredicted RBP6.05□□□□□ -1.44
SMCHD1-213ENST00000609587 CELF4Q9BZC1 486 aaKnown RBP6.05□□□□□ -1.44
SMCHD1-213ENST00000609587 BRINP2Q9C0B6 783 aa6.05□□□□□ -1.44
SMCHD1-213ENST00000609587 EPB41L1Q9H4G0 881 aa6.05□□□□□ -1.44
SMCHD1-213ENST00000609587 BCAS3Q9H6U6 928 aa6.05□□□□□ -1.44
SMCHD1-213ENST00000609587 ST6GALNAC2Q9UJ37 374 aa6.05□□□□□ -1.44
SMCHD1-213ENST00000609587 M0R2C6 588 aa6.04□□□□□ -1.44
SMCHD1-213ENST00000609587 DGKIO75912 1065 aa6.04□□□□□ -1.44
SMCHD1-213ENST00000609587 GLRX3O76003 335 aaKnown RBP6.04□□□□□ -1.44
SMCHD1-213ENST00000609587 CACNB2Q08289 660 aaPredicted RBP6.04□□□□□ -1.44
SMCHD1-213ENST00000609587 SPIRE1Q08AE8 756 aa6.04□□□□□ -1.44
SMCHD1-213ENST00000609587 CRY1Q16526 586 aa6.04□□□□□ -1.44
SMCHD1-213ENST00000609587 EMC4Q5J8M3 183 aa6.04□□□□□ -1.44
SMCHD1-213ENST00000609587 MIB1Q86YT6 1006 aa6.04□□□□□ -1.44
SMCHD1-213ENST00000609587 ADAMTS17Q8TE56 1095 aa6.04□□□□□ -1.44
SMCHD1-213ENST00000609587 MTFR1LQ9H019 292 aa6.04□□□□□ -1.44
SMCHD1-213ENST00000609587 PCDH12Q9NPG4 1184 aa6.04□□□□□ -1.44
SMCHD1-213ENST00000609587 ZNF652Q9Y2D9 606 aa6.04□□□□□ -1.44
SMCHD1-213ENST00000609587 hCG_2014768A0A024R1R8 64 aa6.03□□□□□ -1.44
SMCHD1-213ENST00000609587 HGSO14964 777 aaPredicted RBP6.03□□□□□ -1.44
SMCHD1-213ENST00000609587 TADA3O75528 432 aa6.03□□□□□ -1.44
SMCHD1-213ENST00000609587 COL6A2P12110 1019 aa6.03□□□□□ -1.44
SMCHD1-213ENST00000609587 TMEM177Q53S58 311 aa6.03□□□□□ -1.44
SMCHD1-213ENST00000609587 PKN3Q6P5Z2 889 aa6.03□□□□□ -1.44
SMCHD1-213ENST00000609587 DDX46Q7L014 1031 aaKnown RBP6.03□□□□□ -1.44
SMCHD1-213ENST00000609587 OTOP3Q7RTS5 596 aa6.03□□□□□ -1.44
SMCHD1-213ENST00000609587 MILR1Q7Z6M3 343 aa6.03□□□□□ -1.44
SMCHD1-213ENST00000609587 CISD2Q8N5K1 135 aaKnown RBP6.03□□□□□ -1.44
SMCHD1-213ENST00000609587 SMARCC2Q8TAQ2 1214 aa6.03□□□□□ -1.44
SMCHD1-213ENST00000609587 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.03□□□□□ -1.44
SMCHD1-213ENST00000609587 PUS7Q96PZ0 661 aaKnown RBP6.03□□□□□ -1.44
SMCHD1-213ENST00000609587 CABP5Q9NP86 173 aa6.03□□□□□ -1.44
SMCHD1-213ENST00000609587 CBLCQ9ULV8 474 aa6.03□□□□□ -1.44
SMCHD1-213ENST00000609587 NOP58Q9Y2X3 529 aaKnown RBP6.03□□□□□ -1.44
SMCHD1-213ENST00000609587 TSC22D4Q9Y3Q8 395 aa6.03□□□□□ -1.44
SMCHD1-213ENST00000609587 CBX4O00257 560 aa6.02□□□□□ -1.45
SMCHD1-213ENST00000609587 KRIT1O00522 736 aa6.02□□□□□ -1.45
SMCHD1-213ENST00000609587 PDE6AP16499 860 aa6.02□□□□□ -1.45
SMCHD1-213ENST00000609587 AMPD3Q01432 767 aa6.02□□□□□ -1.45
SMCHD1-213ENST00000609587 STEAP3Q658P3 488 aa6.02□□□□□ -1.45
SMCHD1-213ENST00000609587 CYP4F22Q6NT55 531 aa6.02□□□□□ -1.45
SMCHD1-213ENST00000609587 ETV3LQ6ZN32 361 aa6.02□□□□□ -1.45
SMCHD1-213ENST00000609587 OVCH1Q7RTY7 1134 aa6.02□□□□□ -1.45
SMCHD1-213ENST00000609587 PIP4K2CQ8TBX8 421 aa6.02□□□□□ -1.45
SMCHD1-213ENST00000609587 PCED1AQ9H1Q7 454 aa6.02□□□□□ -1.45
SMCHD1-213ENST00000609587 PCDH18Q9HCL0 1135 aa6.02□□□□□ -1.45
SMCHD1-213ENST00000609587 NKRFO15226 690 aaKnown RBP eCLIP6.01□□□□□ -1.45
SMCHD1-213ENST00000609587 KRT15P19012 456 aa6.01□□□□□ -1.45
SMCHD1-213ENST00000609587 ANAPC15P60006 121 aa6.01□□□□□ -1.45
SMCHD1-213ENST00000609587 IGBP1P78318 339 aa6.01□□□□□ -1.45
SMCHD1-213ENST00000609587 LACTBP83111 547 aaPredicted RBP6.01□□□□□ -1.45
SMCHD1-213ENST00000609587 GPR19Q15760 415 aa6.01□□□□□ -1.45
SMCHD1-213ENST00000609587 SEPT7Q16181 437 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms