RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 ITGB5P18084 799 aa17.01■□□□□ 0.31
CTSA-216ENST00000607212 NAPAP54920 295 aa17.01■□□□□ 0.31
CTSA-216ENST00000607212 ADAM17P78536 824 aa17.01■□□□□ 0.31
CTSA-216ENST00000607212 MRPS6P82932 125 aaKnown RBP17.01■□□□□ 0.31
CTSA-216ENST00000607212 LPIN1Q14693 890 aa17.01■□□□□ 0.31
CTSA-216ENST00000607212 CREB3L3Q68CJ9 461 aa17.01■□□□□ 0.31
CTSA-216ENST00000607212 TSHZ1Q6ZSZ6 1077 aa17.01■□□□□ 0.31
CTSA-216ENST00000607212 TNPO1Q92973 898 aaKnown RBP17.01■□□□□ 0.31
CTSA-216ENST00000607212 IGFLR1Q9H665 355 aa17.01■□□□□ 0.31
CTSA-216ENST00000607212 JADE2Q9NQC1 790 aa17.01■□□□□ 0.31
CTSA-216ENST00000607212 NAP1L2Q9ULW6 460 aaPredicted RBP17.01■□□□□ 0.31
CTSA-216ENST00000607212 UBIAD1Q9Y5Z9 338 aa17.01■□□□□ 0.31
CTSA-216ENST00000607212 BDP1A6H8Y1 2624 aa17.01■□□□□ 0.31
CTSA-216ENST00000607212 LOXHD1Q8IVV2 1947 aa17■□□□□ 0.31
CTSA-216ENST00000607212 GRXCR2A6NFK2 248 aa17■□□□□ 0.31
CTSA-216ENST00000607212 RRN3P2A6NIE6 340 aa17■□□□□ 0.31
CTSA-216ENST00000607212 PI4K2BG5E9Z4 385 aa17■□□□□ 0.31
CTSA-216ENST00000607212 RB1P06400 928 aa17■□□□□ 0.31
CTSA-216ENST00000607212 ZNF76P36508 570 aa17■□□□□ 0.31
CTSA-216ENST00000607212 LIFRP42702 1097 aa17■□□□□ 0.31
CTSA-216ENST00000607212 MGAT3Q09327 533 aa17■□□□□ 0.31
CTSA-216ENST00000607212 TMEM62Q0P6H9 643 aa17■□□□□ 0.31
CTSA-216ENST00000607212 CLUL1Q15846 466 aa17■□□□□ 0.31
CTSA-216ENST00000607212 IER5Q5VY09 327 aa17■□□□□ 0.31
CTSA-216ENST00000607212 TMTC3Q6ZXV5 915 aa17■□□□□ 0.31
CTSA-216ENST00000607212 RPAINQ86UA6 219 aa17■□□□□ 0.31
CTSA-216ENST00000607212 FANCBQ8NB91 859 aa17■□□□□ 0.31
CTSA-216ENST00000607212 ZBTB10Q96DT7 871 aa17■□□□□ 0.31
CTSA-216ENST00000607212 PABPC5Q96DU9 382 aaKnown RBP17■□□□□ 0.31
CTSA-216ENST00000607212 PGBD1Q96JS3 809 aa17■□□□□ 0.31
CTSA-216ENST00000607212 LSG1Q9H089 658 aaKnown RBP17■□□□□ 0.31
CTSA-216ENST00000607212 SLC9A2Q9UBY0 812 aa17■□□□□ 0.31
CTSA-216ENST00000607212 MUC3AQ02505 3323 aa16.99■□□□□ 0.31
CTSA-216ENST00000607212 ENPP3O14638 875 aa16.99■□□□□ 0.31
CTSA-216ENST00000607212 GPR37L1O60883 481 aa16.99■□□□□ 0.31
CTSA-216ENST00000607212 RPLP2P05387 115 aaKnown RBP16.99■□□□□ 0.31
CTSA-216ENST00000607212 ALADP13716 330 aa16.99■□□□□ 0.31
CTSA-216ENST00000607212 INSRRP14616 1297 aa16.99■□□□□ 0.31
CTSA-216ENST00000607212 CD52P31358 61 aa16.99■□□□□ 0.31
CTSA-216ENST00000607212 BMPR1AP36894 532 aa16.99■□□□□ 0.31
CTSA-216ENST00000607212 PAN2Q504Q3 1202 aaKnown RBP16.99■□□□□ 0.31
CTSA-216ENST00000607212 FBXO47Q5MNV8 452 aa16.99■□□□□ 0.31
CTSA-216ENST00000607212 RNF20Q5VTR2 975 aa16.99■□□□□ 0.31
CTSA-216ENST00000607212 ESYT1Q9BSJ8 1104 aa16.99■□□□□ 0.31
CTSA-216ENST00000607212 LRFN2Q9ULH4 789 aa16.99■□□□□ 0.31
CTSA-216ENST00000607212 TRPV2Q9Y5S1 764 aa16.99■□□□□ 0.31
CTSA-216ENST00000607212 COL4A6Q14031 1691 aa16.98■□□□□ 0.31
CTSA-216ENST00000607212 DDX39AO00148 427 aaKnown RBP16.98■□□□□ 0.31
CTSA-216ENST00000607212 GRM6O15303 877 aa16.98■□□□□ 0.31
CTSA-216ENST00000607212 MAFGO15525 162 aa16.98■□□□□ 0.31
CTSA-216ENST00000607212 NCK2O43639 380 aa16.98■□□□□ 0.31
CTSA-216ENST00000607212 ADCY7P51828 1080 aa16.98■□□□□ 0.31
CTSA-216ENST00000607212 PAK2Q13177 524 aa16.98■□□□□ 0.31
CTSA-216ENST00000607212 NEK9Q8TD19 979 aa16.98■□□□□ 0.31
CTSA-216ENST00000607212 MXRA8Q9BRK3 442 aa16.98■□□□□ 0.31
CTSA-216ENST00000607212 LMAN2LQ9H0V9 348 aa16.98■□□□□ 0.31
CTSA-216ENST00000607212 RBM28Q9NW13 759 aaKnown RBP16.98■□□□□ 0.31
CTSA-216ENST00000607212 GINS2Q9Y248 185 aa16.98■□□□□ 0.31
CTSA-216ENST00000607212 MYO7AQ13402 2215 aa16.97■□□□□ 0.31
CTSA-216ENST00000607212 BACH1O14867 736 aa16.97■□□□□ 0.31
CTSA-216ENST00000607212 STAG3L1P0CL83 205 aa16.97■□□□□ 0.31
CTSA-216ENST00000607212 FGD1P98174 961 aa16.97■□□□□ 0.31
CTSA-216ENST00000607212 RTN1Q16799 776 aa16.97■□□□□ 0.31
CTSA-216ENST00000607212 SPOUT1Q5T280 376 aaKnown RBP16.97■□□□□ 0.31
CTSA-216ENST00000607212 WWC2Q6AWC2 1192 aa16.97■□□□□ 0.31
CTSA-216ENST00000607212 TRAPPC12Q8WVT3 735 aa16.97■□□□□ 0.31
CTSA-216ENST00000607212 PPP2R3CQ969Q6 453 aa16.97■□□□□ 0.31
CTSA-216ENST00000607212 FTHL17Q9BXU8 183 aa16.97■□□□□ 0.31
CTSA-216ENST00000607212 ALG13Q9NP73 1137 aaKnown RBP16.97■□□□□ 0.31
CTSA-216ENST00000607212 KCNH7Q9NS40 1196 aa16.97■□□□□ 0.31
CTSA-216ENST00000607212 XIRP2A4UGR9 3374 aa16.97■□□□□ 0.31
CTSA-216ENST00000607212 ATG2AQ2TAZ0 1938 aa16.97■□□□□ 0.31
CTSA-216ENST00000607212 TTC3P53804 2025 aa16.96■□□□□ 0.31
CTSA-216ENST00000607212 MBLAC1A4D2B0 266 aaPredicted RBP16.96■□□□□ 0.31
CTSA-216ENST00000607212 STAT5BP51692 787 aa16.96■□□□□ 0.31
CTSA-216ENST00000607212 ACTR2P61160 394 aa16.96■□□□□ 0.31
CTSA-216ENST00000607212 PLCB4Q15147 1175 aa16.96■□□□□ 0.31
CTSA-216ENST00000607212 MARCH8Q5T0T0 291 aa16.96■□□□□ 0.31
CTSA-216ENST00000607212 TCEANC2Q96MN5 208 aa16.96■□□□□ 0.31
CTSA-216ENST00000607212 ANO3Q9BYT9 981 aa16.96■□□□□ 0.31
CTSA-216ENST00000607212 AGO3Q9H9G7 860 aaKnown RBP16.96■□□□□ 0.31
CTSA-216ENST00000607212 C11orf16Q9NQ32 467 aa16.96■□□□□ 0.31
CTSA-216ENST00000607212 TCEAL9Q9UHQ7 104 aa16.96■□□□□ 0.31
CTSA-216ENST00000607212 CNTNAP5Q8WYK1 1306 aa16.96■□□□□ 0.3
CTSA-216ENST00000607212 POTEB3A0JP26 581 aa16.95■□□□□ 0.3
CTSA-216ENST00000607212 GOLGA8AA7E2F4 631 aa16.95■□□□□ 0.3
CTSA-216ENST00000607212 GOLGA8BA8MQT2 603 aa16.95■□□□□ 0.3
CTSA-216ENST00000607212 C5orf67F2Z3F1 127 aa16.95■□□□□ 0.3
CTSA-216ENST00000607212 ZBTB43O43298 467 aa16.95■□□□□ 0.3
CTSA-216ENST00000607212 DCXO43602 365 aa16.95■□□□□ 0.3
CTSA-216ENST00000607212 FOSP01100 380 aaPredicted RBP16.95■□□□□ 0.3
CTSA-216ENST00000607212 ARP10275 920 aa16.95■□□□□ 0.3
CTSA-216ENST00000607212 NDUFV1P49821 464 aa16.95■□□□□ 0.3
CTSA-216ENST00000607212 NFX1Q12986 1120 aaKnown RBP16.95■□□□□ 0.3
CTSA-216ENST00000607212 COL9A3Q14050 684 aaPredicted RBP16.95■□□□□ 0.3
CTSA-216ENST00000607212 FAM160B1Q5W0V3 765 aa16.95■□□□□ 0.3
CTSA-216ENST00000607212 POTEBQ6S5H4 581 aa16.95■□□□□ 0.3
CTSA-216ENST00000607212 NPAS4Q8IUM7 802 aa16.95■□□□□ 0.3
CTSA-216ENST00000607212 CYP2W1Q8TAV3 490 aa16.95■□□□□ 0.3
CTSA-216ENST00000607212 NEK1Q96PY6 1258 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms