RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 MEIS1O00470 390 aa11.37□□□□□ -0.59
CTSA-215ENST00000607187 CYP3A4P08684 503 aa11.37□□□□□ -0.59
CTSA-215ENST00000607187 NEK4P51957 841 aa11.37□□□□□ -0.59
CTSA-215ENST00000607187 CCL23P55773 120 aa11.37□□□□□ -0.59
CTSA-215ENST00000607187 NIPA1Q7RTP0 329 aa11.37□□□□□ -0.59
CTSA-215ENST00000607187 FAM177A1Q8N128 213 aaPredicted RBP11.37□□□□□ -0.59
CTSA-215ENST00000607187 RNPC3Q96LT9 517 aaKnown RBP11.37□□□□□ -0.59
CTSA-215ENST00000607187 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.37□□□□□ -0.594e-8■■■□□ 15.3
CTSA-215ENST00000607187 GDPD2Q9HCC8 539 aa11.37□□□□□ -0.59
CTSA-215ENST00000607187 IL23AQ9NPF7 189 aa11.37□□□□□ -0.59
CTSA-215ENST00000607187 EYSQ5T1H1 3165 aa11.37□□□□□ -0.59
CTSA-215ENST00000607187 NFASCO94856 1347 aa11.36□□□□□ -0.59
CTSA-215ENST00000607187 GBF1Q92538 1859 aa11.36□□□□□ -0.59
CTSA-215ENST00000607187 CHD9Q3L8U1 2897 aa11.36□□□□□ -0.59
CTSA-215ENST00000607187 IGLV3-22A0A075B6J6 115 aa11.36□□□□□ -0.59
CTSA-215ENST00000607187 GSTTP1A0A1W2PQM5 241 aa11.36□□□□□ -0.59
CTSA-215ENST00000607187 FAM86B1E9PN63 330 aa11.36□□□□□ -0.59
CTSA-215ENST00000607187 CDKL5O76039 1030 aa11.36□□□□□ -0.59
CTSA-215ENST00000607187 CTDNEP1O95476 244 aa11.36□□□□□ -0.59
CTSA-215ENST00000607187 FAM86B2P0C5J1 330 aa11.36□□□□□ -0.59
CTSA-215ENST00000607187 ARP10275 920 aa11.36□□□□□ -0.59
CTSA-215ENST00000607187 ACRP10323 421 aa11.36□□□□□ -0.59
CTSA-215ENST00000607187 HOXC8P31273 242 aa11.36□□□□□ -0.59
CTSA-215ENST00000607187 SP4Q02446 784 aa11.36□□□□□ -0.59
CTSA-215ENST00000607187 BFSP2Q13515 415 aa11.36□□□□□ -0.59
CTSA-215ENST00000607187 ME3Q16798 604 aa11.36□□□□□ -0.59
CTSA-215ENST00000607187 TMEM240Q5SV17 173 aa11.36□□□□□ -0.59
CTSA-215ENST00000607187 PSRC1Q6PGN9 363 aaPredicted RBP11.36□□□□□ -0.59
CTSA-215ENST00000607187 CAGE1Q8TC20 777 aa11.36□□□□□ -0.59
CTSA-215ENST00000607187 RASGRP4Q8TDF6 673 aa11.36□□□□□ -0.59
CTSA-215ENST00000607187 SEPT1Q8WYJ6 367 aa11.36□□□□□ -0.59
CTSA-215ENST00000607187 VWCEQ96DN2 955 aa11.36□□□□□ -0.59
CTSA-215ENST00000607187 AIFM3Q96NN9 605 aa11.36□□□□□ -0.59
CTSA-215ENST00000607187 AGO4Q9HCK5 861 aaKnown RBP11.36□□□□□ -0.59
CTSA-215ENST00000607187 JPH1Q9HDC5 661 aaPredicted RBP11.36□□□□□ -0.59
CTSA-215ENST00000607187 PKD2L1Q9P0L9 805 aa11.36□□□□□ -0.59
CTSA-215ENST00000607187 PCDHA4Q9UN74 947 aa11.36□□□□□ -0.59
CTSA-215ENST00000607187 NOD1Q9Y239 953 aa11.36□□□□□ -0.59
CTSA-215ENST00000607187 STK36Q9NRP7 1315 aa11.35□□□□□ -0.59
CTSA-215ENST00000607187 CHD7Q9P2D1 2997 aa11.35□□□□□ -0.59
CTSA-215ENST00000607187 M0R2N6 131 aa11.35□□□□□ -0.59
CTSA-215ENST00000607187 EDIL3O43854 480 aa11.35□□□□□ -0.59
CTSA-215ENST00000607187 LARGE1O95461 756 aa11.35□□□□□ -0.59
CTSA-215ENST00000607187 IQCF3P0C7M6 154 aa11.35□□□□□ -0.59
CTSA-215ENST00000607187 CIITAP33076 1130 aa11.35□□□□□ -0.59
CTSA-215ENST00000607187 TCF7P36402 384 aaPredicted RBP11.35□□□□□ -0.59
CTSA-215ENST00000607187 ZNF76P36508 570 aa11.35□□□□□ -0.59
CTSA-215ENST00000607187 NLRP5P59047 1200 aa11.35□□□□□ -0.59
CTSA-215ENST00000607187 RBL2Q08999 1139 aa11.35□□□□□ -0.59
CTSA-215ENST00000607187 ITGB3BPQ13352 177 aaPredicted RBP11.35□□□□□ -0.59
CTSA-215ENST00000607187 NPY5RQ15761 445 aa11.35□□□□□ -0.59
CTSA-215ENST00000607187 UTP14CQ5TAP6 766 aaKnown RBP11.35□□□□□ -0.59
CTSA-215ENST00000607187 RASIP1Q5U651 963 aa11.35□□□□□ -0.59
CTSA-215ENST00000607187 GALNT17Q6IS24 598 aa11.35□□□□□ -0.59
CTSA-215ENST00000607187 ZNF365Q70YC5 407 aa11.35□□□□□ -0.59
CTSA-215ENST00000607187 TRIM50Q86XT4 487 aa11.35□□□□□ -0.59
CTSA-215ENST00000607187 RPUSD2Q8IZ73 545 aaKnown RBP11.35□□□□□ -0.59
CTSA-215ENST00000607187 DAGLBQ8NCG7 672 aa11.35□□□□□ -0.59
CTSA-215ENST00000607187 DHX38Q92620 1227 aaKnown RBP11.35□□□□□ -0.59
CTSA-215ENST00000607187 GTF3C6Q969F1 213 aa11.35□□□□□ -0.59
CTSA-215ENST00000607187 SCLYQ96I15 445 aa11.35□□□□□ -0.59
CTSA-215ENST00000607187 KIF2CQ99661 725 aa11.35□□□□□ -0.59
CTSA-215ENST00000607187 SDF4Q9BRK5 362 aa11.35□□□□□ -0.59
CTSA-215ENST00000607187 SLC9A2Q9UBY0 812 aa11.35□□□□□ -0.59
CTSA-215ENST00000607187 ZNF215Q9UL58 517 aaPredicted RBP11.35□□□□□ -0.59
CTSA-215ENST00000607187 LGR5O75473 907 aa11.34□□□□□ -0.59
CTSA-215ENST00000607187 PFKMP08237 780 aa11.34□□□□□ -0.59
CTSA-215ENST00000607187 SMIM10L2AP0DMW4 78 aa11.34□□□□□ -0.59
CTSA-215ENST00000607187 SMIM10L2BP0DMW5 78 aa11.34□□□□□ -0.59
CTSA-215ENST00000607187 RFC2P35250 354 aa11.34□□□□□ -0.59
CTSA-215ENST00000607187 USP11P51784 963 aa11.34□□□□□ -0.59
CTSA-215ENST00000607187 SMAD3P84022 425 aaKnown RBP11.34□□□□□ -0.59
CTSA-215ENST00000607187 ZNF200P98182 395 aaPredicted RBP11.34□□□□□ -0.59
CTSA-215ENST00000607187 SETQ01105 290 aaPredicted RBP11.34□□□□□ -0.59
CTSA-215ENST00000607187 PTK7Q13308 1070 aa11.34□□□□□ -0.59
CTSA-215ENST00000607187 TRIM71Q2Q1W2 868 aaKnown RBP11.34□□□□□ -0.59
CTSA-215ENST00000607187 SERINC5Q86VE9 423 aa11.34□□□□□ -0.59
CTSA-215ENST00000607187 PLA2G4DQ86XP0 818 aa11.34□□□□□ -0.59
CTSA-215ENST00000607187 BLIDQ8IZY5 108 aa11.34□□□□□ -0.59
CTSA-215ENST00000607187 CCDC155Q8N6L0 562 aa11.34□□□□□ -0.59
CTSA-215ENST00000607187 NECAB1Q8N987 351 aa11.34□□□□□ -0.59
CTSA-215ENST00000607187 TTC13Q8NBP0 860 aa11.34□□□□□ -0.59
CTSA-215ENST00000607187 AFAP1L1Q8TED9 768 aa11.34□□□□□ -0.59
CTSA-215ENST00000607187 HERVK_113Q902F9 699 aa11.34□□□□□ -0.59
CTSA-215ENST00000607187 RNPEPQ9H4A4 650 aa11.34□□□□□ -0.59
CTSA-215ENST00000607187 PRUNE2Q8WUY3 3088 aa11.34□□□□□ -0.59
CTSA-215ENST00000607187 EMSYQ7Z589 1322 aa11.34□□□□□ -0.59
CTSA-215ENST00000607187 EVPLQ92817 2033 aa11.33□□□□□ -0.6
CTSA-215ENST00000607187 LOXHD1Q8IVV2 1947 aa11.33□□□□□ -0.6
CTSA-215ENST00000607187 C17orf102A2RUQ5 167 aa11.33□□□□□ -0.6
CTSA-215ENST00000607187 IPO5O00410 1097 aaKnown RBP11.33□□□□□ -0.6
CTSA-215ENST00000607187 DHX15O43143 795 aaKnown RBP11.33□□□□□ -0.6
CTSA-215ENST00000607187 ATG7O95352 703 aa11.33□□□□□ -0.6
CTSA-215ENST00000607187 FGBP02675 491 aa11.33□□□□□ -0.6
CTSA-215ENST00000607187 CKBP12277 381 aa11.33□□□□□ -0.6
CTSA-215ENST00000607187 FDPSP14324 419 aaKnown RBP11.33□□□□□ -0.6
CTSA-215ENST00000607187 SELPP16109 830 aa11.33□□□□□ -0.6
CTSA-215ENST00000607187 RBM25P49756 843 aaKnown RBP11.33□□□□□ -0.6
CTSA-215ENST00000607187 ACTR2P61160 394 aa11.33□□□□□ -0.6
CTSA-215ENST00000607187 FAM109BQ6ICB4 259 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms