RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 SLC35B4Q969S0 331 aa5.18□□□□□ -1.58
LINC01109-201ENST00000603837 ACSBG1Q96GR2 724 aa5.18□□□□□ -1.58
LINC01109-201ENST00000603837 FRMD6Q96NE9 622 aa5.18□□□□□ -1.58
LINC01109-201ENST00000603837 NEK1Q96PY6 1258 aa5.18□□□□□ -1.58
LINC01109-201ENST00000603837 PRAM1Q96QH2 718 aa5.18□□□□□ -1.58
LINC01109-201ENST00000603837 OSBPL10Q9BXB5 764 aa5.18□□□□□ -1.58
LINC01109-201ENST00000603837 RTFDC1Q9BY42 306 aaPredicted RBP5.18□□□□□ -1.58
LINC01109-201ENST00000603837 SRCIN1Q9C0H9 1055 aa5.18□□□□□ -1.58
LINC01109-201ENST00000603837 KAT14Q9H8E8 782 aa5.18□□□□□ -1.58
LINC01109-201ENST00000603837 DBNDD1Q9H9R9 158 aa5.18□□□□□ -1.58
LINC01109-201ENST00000603837 GIMAP2Q9UG22 337 aa5.18□□□□□ -1.58
LINC01109-201ENST00000603837 L1RE1Q9UN81 338 aa5.18□□□□□ -1.58
LINC01109-201ENST00000603837 PA2G4Q9UQ80 394 aaKnown RBP5.18□□□□□ -1.58
LINC01109-201ENST00000603837 PRELID1Q9Y255 219 aa5.18□□□□□ -1.58
LINC01109-201ENST00000603837 SSX2IPQ9Y2D8 614 aa5.18□□□□□ -1.58
LINC01109-201ENST00000603837 USP16Q9Y5T5 823 aa5.18□□□□□ -1.58
LINC01109-201ENST00000603837 ARHGEF28Q8N1W1 1705 aaKnown RBP5.18□□□□□ -1.58
LINC01109-201ENST00000603837 CDHR2Q9BYE9 1310 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 MTRF1O75570 445 aaKnown RBP5.17□□□□□ -1.58
LINC01109-201ENST00000603837 EPN2O95208 641 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 LARGE1O95461 756 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 VIMP08670 466 aaKnown RBP5.17□□□□□ -1.58
LINC01109-201ENST00000603837 HARSP12081 509 aaKnown RBP5.17□□□□□ -1.58
LINC01109-201ENST00000603837 GALNSP34059 522 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 STK3Q13188 491 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 DYNC1I2Q13409 638 aaKnown RBP5.17□□□□□ -1.58
LINC01109-201ENST00000603837 RCN1Q15293 331 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 ACCSLQ4AC99 568 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 ATP13A4Q4VNC1 1196 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 CRTC2Q53ET0 693 aaPredicted RBP5.17□□□□□ -1.58
LINC01109-201ENST00000603837 PLEKHG4Q58EX7 1191 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 OXLD1Q5BKU9 147 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 SARM1Q6SZW1 724 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 PEX5LQ8IYB4 626 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 CCDC13Q8IYE1 715 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 SMYD1Q8NB12 490 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 HDAC7Q8WUI4 952 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 CORO1BQ9BR76 489 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 NLRP2Q9NX02 1062 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 SNTG2Q9NY99 539 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 LEMD3Q9Y2U8 911 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 LILRA1O75019 489 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 TRIM21P19474 475 aaKnown RBP5.17□□□□□ -1.58
LINC01109-201ENST00000603837 HADHAP40939 763 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 SCTRP47872 440 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 KCNJ6P48051 423 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 ZNF165P49910 485 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 SLC12A2P55011 1212 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 CLDN10P78369 228 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 CACNB2Q08289 660 aaPredicted RBP5.17□□□□□ -1.58
LINC01109-201ENST00000603837 IFFO1Q0D2I5 559 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 MYO1EQ12965 1108 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 CUL4AQ13619 759 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 LAMC2Q13753 1193 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 ARHGEF6Q15052 776 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 SWSAP1Q6NVH7 229 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 PLBD1Q6P4A8 553 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 COLGALT2Q8IYK4 626 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 DZIP1LQ8IYY4 767 aaKnown RBP5.17□□□□□ -1.58
LINC01109-201ENST00000603837 FAM76AQ8TAV0 307 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 ARHGEF2Q92974 986 aaKnown RBP5.17□□□□□ -1.58
LINC01109-201ENST00000603837 INTS4Q96HW7 963 aaKnown RBP5.17□□□□□ -1.58
LINC01109-201ENST00000603837 GMLQ99445 158 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 NTPCRQ9BSD7 190 aaKnown RBP5.17□□□□□ -1.58
LINC01109-201ENST00000603837 BRD8Q9H0E9 1235 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 ZWILCHQ9H900 591 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 ABCB6Q9NP58 842 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 RIMKLBQ9ULI2 386 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 NOVA2Q9UNW9 492 aaKnown RBP5.17□□□□□ -1.58
LINC01109-201ENST00000603837 TMEM221A6NGB7 291 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 LCE2BO14633 110 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 EIF3HO15372 352 aaKnown RBP eCLIP5.17□□□□□ -1.58
LINC01109-201ENST00000603837 TREHO43280 583 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 SART1O43290 800 aaKnown RBP5.17□□□□□ -1.58
LINC01109-201ENST00000603837 GNAI3P08754 354 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 BMP1P13497 986 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 ALOX15P16050 662 aaPredicted RBP5.17□□□□□ -1.58
LINC01109-201ENST00000603837 ERVK-9P63128 1117 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 CCDC38Q502W7 563 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 FAM133BQ5BKY9 247 aaKnown RBP5.17□□□□□ -1.58
LINC01109-201ENST00000603837 Q6ZVU0 165 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 TAB3Q8N5C8 712 aaPredicted RBP5.17□□□□□ -1.58
LINC01109-201ENST00000603837 GBP7Q8N8V2 638 aaPredicted RBP5.17□□□□□ -1.58
LINC01109-201ENST00000603837 IGSF22Q8N9C0 903 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 IPMKQ8NFU5 416 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 RASSF8Q8NHQ8 419 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 GLT8D2Q9H1C3 349 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 SUGCTQ9HAC7 445 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 ALG13Q9NP73 1137 aaKnown RBP5.17□□□□□ -1.58
LINC01109-201ENST00000603837 BLOC1S4Q9NUP1 217 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 TUBGCP4Q9UGJ1 667 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 PHF24Q9UPV7 400 aa5.17□□□□□ -1.58
LINC01109-201ENST00000603837 UBR1Q8IWV7 1749 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 NDUFAB1O14561 156 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 PRPF6O94906 941 aaKnown RBP5.16□□□□□ -1.58
LINC01109-201ENST00000603837 GNRH1P01148 92 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 SLC3A2P08195 630 aaKnown RBP5.16□□□□□ -1.58
LINC01109-201ENST00000603837 PRLRP16471 622 aa5.16□□□□□ -1.58
LINC01109-201ENST00000603837 ZFXP17010 805 aaPredicted RBP5.16□□□□□ -1.58
LINC01109-201ENST00000603837 ATP5JP18859 108 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms