RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 PRPHP41219 470 aa15.63■□□□□ 0.09
RNF40-212ENST00000602784 TXKP42681 527 aa15.63■□□□□ 0.09
RNF40-212ENST00000602784 FAAP100Q0VG06 881 aa15.63■□□□□ 0.09
RNF40-212ENST00000602784 PTGDRQ13258 359 aa15.63■□□□□ 0.09
RNF40-212ENST00000602784 NBR1Q14596 966 aa15.63■□□□□ 0.09
RNF40-212ENST00000602784 PDXDC2PQ6P474 469 aa15.63■□□□□ 0.09
RNF40-212ENST00000602784 CCDC60Q8IWA6 550 aaPredicted RBP15.63■□□□□ 0.09
RNF40-212ENST00000602784 SPRYD3Q8NCJ5 442 aa15.63■□□□□ 0.09
RNF40-212ENST00000602784 RNPEPQ9H4A4 650 aa15.63■□□□□ 0.09
RNF40-212ENST00000602784 HDAC6Q9UBN7 1215 aa15.63■□□□□ 0.09
RNF40-212ENST00000602784 GTF2IRD1Q9UHL9 959 aa15.63■□□□□ 0.09
RNF40-212ENST00000602784 NRCAMQ92823 1304 aa15.63■□□□□ 0.09
RNF40-212ENST00000602784 CHMP2AO43633 222 aa15.62■□□□□ 0.09
RNF40-212ENST00000602784 CLTBP09497 229 aa15.62■□□□□ 0.09
RNF40-212ENST00000602784 SMIM10L2AP0DMW4 78 aa15.62■□□□□ 0.09
RNF40-212ENST00000602784 SMIM10L2BP0DMW5 78 aa15.62■□□□□ 0.09
RNF40-212ENST00000602784 CHMP4BP1P59074 171 aa15.62■□□□□ 0.09
RNF40-212ENST00000602784 EPHA7Q15375 998 aa15.62■□□□□ 0.09
RNF40-212ENST00000602784 FAM47CQ5HY64 1035 aa15.62■□□□□ 0.09
RNF40-212ENST00000602784 IGSF9BQ9UPX0 1349 aa15.62■□□□□ 0.09
RNF40-212ENST00000602784 POTEB3A0JP26 581 aa15.61■□□□□ 0.09
RNF40-212ENST00000602784 RRN3P2A6NIE6 340 aa15.61■□□□□ 0.09
RNF40-212ENST00000602784 EML1O00423 815 aa15.61■□□□□ 0.09
RNF40-212ENST00000602784 KIAA0355O15063 1070 aa15.61■□□□□ 0.09
RNF40-212ENST00000602784 B4GALT4O60513 344 aa15.61■□□□□ 0.09
RNF40-212ENST00000602784 ZSCAN22P10073 491 aaPredicted RBP15.61■□□□□ 0.09
RNF40-212ENST00000602784 FXR2P51116 673 aaKnown RBP eCLIP15.61■□□□□ 0.09
RNF40-212ENST00000602784 ATP2C1P98194 919 aaPredicted RBP15.61■□□□□ 0.09
RNF40-212ENST00000602784 PDIA5Q14554 519 aa15.61■□□□□ 0.09
RNF40-212ENST00000602784 PLCB4Q15147 1175 aa15.61■□□□□ 0.09
RNF40-212ENST00000602784 ARL6IP4Q66PJ3 421 aaKnown RBP15.61■□□□□ 0.09
RNF40-212ENST00000602784 GDF6Q6KF10 455 aaPredicted RBP15.61■□□□□ 0.09
RNF40-212ENST00000602784 POTEBQ6S5H4 581 aa15.61■□□□□ 0.09
RNF40-212ENST00000602784 C7orf61Q8IZ16 206 aa15.61■□□□□ 0.09
RNF40-212ENST00000602784 ATP8B4Q8TF62 1192 aa15.61■□□□□ 0.09
RNF40-212ENST00000602784 ATP6V0A1Q93050 837 aa15.61■□□□□ 0.09
RNF40-212ENST00000602784 FAM167AQ96KS9 214 aa15.61■□□□□ 0.09
RNF40-212ENST00000602784 TRPV6Q9H1D0 765 aa15.61■□□□□ 0.09
RNF40-212ENST00000602784 PDLIM7Q9NR12 457 aa15.61■□□□□ 0.09
RNF40-212ENST00000602784 TRMT13Q9NUP7 481 aaKnown RBP15.61■□□□□ 0.09
RNF40-212ENST00000602784 GABBR1Q9UBS5 961 aa15.61■□□□□ 0.09
RNF40-212ENST00000602784 TBX21Q9UL17 535 aa15.61■□□□□ 0.09
RNF40-212ENST00000602784 CEP290O15078 2479 aa15.6■□□□□ 0.09
RNF40-212ENST00000602784 C17orf102A2RUQ5 167 aa15.6■□□□□ 0.09
RNF40-212ENST00000602784 HBP1O60381 514 aa15.6■□□□□ 0.09
RNF40-212ENST00000602784 DKC1O60832 514 aaKnown RBP eCLIP15.6■□□□□ 0.09
RNF40-212ENST00000602784 P4HBP07237 508 aaKnown RBP15.6■□□□□ 0.09
RNF40-212ENST00000602784 ATP4AP20648 1035 aa15.6■□□□□ 0.09
RNF40-212ENST00000602784 MARK3P27448 753 aa15.6■□□□□ 0.09
RNF40-212ENST00000602784 PSMC5P62195 406 aa15.6■□□□□ 0.09
RNF40-212ENST00000602784 ADAM17P78536 824 aa15.6■□□□□ 0.09
RNF40-212ENST00000602784 PTGISQ16647 500 aa15.6■□□□□ 0.09
RNF40-212ENST00000602784 TMEM266Q2M3C6 531 aa15.6■□□□□ 0.09
RNF40-212ENST00000602784 BBXQ8WY36 941 aaPredicted RBP15.6■□□□□ 0.09
RNF40-212ENST00000602784 HSD17B14Q9BPX1 270 aa15.6■□□□□ 0.09
RNF40-212ENST00000602784 TMEM39AQ9NV64 488 aa15.6■□□□□ 0.09
RNF40-212ENST00000602784 PRKAG2Q9UGJ0 569 aa15.6■□□□□ 0.09
RNF40-212ENST00000602784 CEP131Q9UPN4 1083 aa15.6■□□□□ 0.09
RNF40-212ENST00000602784 MYH9P35579 1960 aaKnown RBP15.6■□□□□ 0.09
RNF40-212ENST00000602784 ZNF862O60290 1169 aa15.59■□□□□ 0.09
RNF40-212ENST00000602784 INSRRP14616 1297 aa15.59■□□□□ 0.09
RNF40-212ENST00000602784 ANP32AP39687 249 aaKnown RBP15.59■□□□□ 0.09
RNF40-212ENST00000602784 QARSP47897 775 aaKnown RBP15.59■□□□□ 0.09
RNF40-212ENST00000602784 PPFIA1Q13136 1202 aa15.59■□□□□ 0.09
RNF40-212ENST00000602784 ZNF484Q5JVG2 852 aa15.59■□□□□ 0.09
RNF40-212ENST00000602784 NCAPH2Q6IBW4 605 aa15.59■□□□□ 0.09
RNF40-212ENST00000602784 DTHD1Q6ZMT9 781 aa15.59■□□□□ 0.09
RNF40-212ENST00000602784 CKAP2LQ8IYA6 745 aa15.59■□□□□ 0.09
RNF40-212ENST00000602784 IGSF22Q8N9C0 903 aa15.59■□□□□ 0.09
RNF40-212ENST00000602784 NEK9Q8TD19 979 aa15.59■□□□□ 0.09
RNF40-212ENST00000602784 LMBR1Q8WVP7 490 aa15.59■□□□□ 0.09
RNF40-212ENST00000602784 CTAGE1Q96RT6 745 aa15.59■□□□□ 0.09
RNF40-212ENST00000602784 RAB34Q9BZG1 259 aa15.59■□□□□ 0.09
RNF40-212ENST00000602784 NRBP2Q9NSY0 501 aa15.59■□□□□ 0.09
RNF40-212ENST00000602784 SETD4Q9NVD3 440 aa15.59■□□□□ 0.09
RNF40-212ENST00000602784 TRPC6Q9Y210 931 aa15.59■□□□□ 0.09
RNF40-212ENST00000602784 NOD1Q9Y239 953 aa15.59■□□□□ 0.09
RNF40-212ENST00000602784 STK24Q9Y6E0 443 aa15.59■□□□□ 0.09
RNF40-212ENST00000602784 MORC2Q9Y6X9 1032 aaPredicted RBP15.59■□□□□ 0.09
RNF40-212ENST00000602784 COL1A2P08123 1366 aa15.59■□□□□ 0.09
RNF40-212ENST00000602784 WDR81Q562E7 1941 aa15.58■□□□□ 0.09
RNF40-212ENST00000602784 MBLAC1A4D2B0 266 aaPredicted RBP15.58■□□□□ 0.08
RNF40-212ENST00000602784 TRIM43BA6NCK2 446 aa15.58■□□□□ 0.08
RNF40-212ENST00000602784 BRD1O95696 1058 aa15.58■□□□□ 0.08
RNF40-212ENST00000602784 F13A1P00488 732 aa15.58■□□□□ 0.08
RNF40-212ENST00000602784 TECP42680 631 aa15.58■□□□□ 0.08
RNF40-212ENST00000602784 PTK7Q13308 1070 aa15.58■□□□□ 0.08
RNF40-212ENST00000602784 PKP1Q13835 747 aa15.58■□□□□ 0.08
RNF40-212ENST00000602784 HIC1Q14526 733 aa15.58■□□□□ 0.08
RNF40-212ENST00000602784 SF3A1Q15459 793 aaKnown RBP15.58■□□□□ 0.08
RNF40-212ENST00000602784 GRIK4Q16099 956 aa15.58■□□□□ 0.08
RNF40-212ENST00000602784 UGCGQ16739 394 aa15.58■□□□□ 0.08
RNF40-212ENST00000602784 XKR3Q5GH77 459 aa15.58■□□□□ 0.08
RNF40-212ENST00000602784 ATL3Q6DD88 541 aa15.58■□□□□ 0.08
RNF40-212ENST00000602784 SH3RF1Q7Z6J0 888 aa15.58■□□□□ 0.08
RNF40-212ENST00000602784 SERINC5Q86VE9 423 aa15.58■□□□□ 0.08
RNF40-212ENST00000602784 C4orf19Q8IY42 314 aa15.58■□□□□ 0.08
RNF40-212ENST00000602784 PPP1R13LQ8WUF5 828 aa15.58■□□□□ 0.08
RNF40-212ENST00000602784 TRIM43Q96BQ3 446 aaPredicted RBP15.58■□□□□ 0.08
RNF40-212ENST00000602784 EIF2AK1Q9BQI3 630 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms