RNA–Protein interactions for RNA: ENST00000602015.5

FARP1-238, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

TSL 5

Gene FARP1, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-238	ENST00000602015	ZFPM1	Q8IX07	1006 aa		6.62	□□□□□ -1.35
FARP1-238	ENST00000602015	NUDT10	Q8NFP7	164 aa		6.62	□□□□□ -1.35
FARP1-238	ENST00000602015	PIP4K2C	Q8TBX8	421 aa		6.62	□□□□□ -1.35
FARP1-238	ENST00000602015		Q8TCH9	128 aa		6.62	□□□□□ -1.35
FARP1-238	ENST00000602015	NUDT11	Q96G61	164 aa		6.62	□□□□□ -1.35
FARP1-238	ENST00000602015	WWC2-AS2	Q96NR7	200 aa		6.62	□□□□□ -1.35
FARP1-238	ENST00000602015	SLITRK6	Q9H5Y7	841 aa		6.62	□□□□□ -1.35
FARP1-238	ENST00000602015	SLC27A2	O14975	620 aa		6.61	□□□□□ -1.35
FARP1-238	ENST00000602015	KNG1	P01042	644 aa		6.61	□□□□□ -1.35
FARP1-238	ENST00000602015	FAH	P16930	419 aa		6.61	□□□□□ -1.35
FARP1-238	ENST00000602015	PPP2R2A	P63151	447 aa		6.61	□□□□□ -1.35
FARP1-238	ENST00000602015	ZNF568	Q3ZCX4	644 aa		6.61	□□□□□ -1.35
FARP1-238	ENST00000602015	OTOP3	Q7RTS5	596 aa		6.61	□□□□□ -1.35
FARP1-238	ENST00000602015	PROSER1	Q86XN7	944 aa		6.61	□□□□□ -1.35
FARP1-238	ENST00000602015	PTPN18	Q99952	460 aa		6.61	□□□□□ -1.35
FARP1-238	ENST00000602015	JAM3	Q9BX67	310 aa		6.61	□□□□□ -1.35
FARP1-238	ENST00000602015	CUL7	Q14999	1698 aa		6.61	□□□□□ -1.35
FARP1-238	ENST00000602015	WDR7	Q9Y4E6	1490 aa		6.6	□□□□□ -1.35
FARP1-238	ENST00000602015	CNOT4	O95628	575 aa	Known RBP	6.6	□□□□□ -1.35
FARP1-238	ENST00000602015	CKM	P06732	381 aa		6.6	□□□□□ -1.35
FARP1-238	ENST00000602015	HSP90AA2P	Q14568	343 aa	Predicted RBP	6.6	□□□□□ -1.35
FARP1-238	ENST00000602015	PRKD1	Q15139	912 aa	Predicted RBP	6.6	□□□□□ -1.35
FARP1-238	ENST00000602015	KIZ	Q2M2Z5	673 aa		6.6	□□□□□ -1.35
FARP1-238	ENST00000602015	SLC10A6	Q3KNW5	377 aa		6.6	□□□□□ -1.35
FARP1-238	ENST00000602015	PAN2	Q504Q3	1202 aa	Known RBP	6.6	□□□□□ -1.35
FARP1-238	ENST00000602015	MRM1	Q6IN84	353 aa	Known RBP	6.6	□□□□□ -1.35
FARP1-238	ENST00000602015	DCAF4	Q8WV16	495 aa		6.6	□□□□□ -1.35
FARP1-238	ENST00000602015	CLEC4D	Q8WXI8	215 aa		6.6	□□□□□ -1.35
FARP1-238	ENST00000602015	SGSM3	Q96HU1	749 aa		6.6	□□□□□ -1.35
FARP1-238	ENST00000602015	LMF1	Q96S06	567 aa		6.6	□□□□□ -1.35
FARP1-238	ENST00000602015	ZFYVE21	Q9BQ24	234 aa		6.6	□□□□□ -1.35
FARP1-238	ENST00000602015	IER2	Q9BTL4	223 aa		6.6	□□□□□ -1.35
FARP1-238	ENST00000602015	PHF20	Q9BVI0	1012 aa		6.6	□□□□□ -1.35
FARP1-238	ENST00000602015	ARHGAP20	Q9P2F6	1191 aa		6.6	□□□□□ -1.35
FARP1-238	ENST00000602015	R3HCC1	Q9Y3T6	440 aa	Known RBP	6.6	□□□□□ -1.35
FARP1-238	ENST00000602015	YEATS2	Q9ULM3	1422 aa		6.59	□□□□□ -1.35
FARP1-238	ENST00000602015	BCORL1	Q5H9F3	1711 aa		6.59	□□□□□ -1.35
FARP1-238	ENST00000602015	BIVM-ERCC5	R4GMW8	1640 aa		6.59	□□□□□ -1.35
FARP1-238	ENST00000602015	IQCA1L	A6NCM1	817 aa		6.59	□□□□□ -1.35
FARP1-238	ENST00000602015	GRIN1	Q05586	938 aa		6.59	□□□□□ -1.35
FARP1-238	ENST00000602015	TUSC3	Q13454	348 aa		6.59	□□□□□ -1.35
FARP1-238	ENST00000602015	SKIDA1	Q1XH10	827 aa		6.59	□□□□□ -1.35
FARP1-238	ENST00000602015	SPDYA	Q5MJ70	313 aa		6.59	□□□□□ -1.35
FARP1-238	ENST00000602015	USP53	Q70EK8	1073 aa		6.59	□□□□□ -1.35
FARP1-238	ENST00000602015	DPH6	Q7L8W6	267 aa		6.59	□□□□□ -1.35
FARP1-238	ENST00000602015	UHMK1	Q8TAS1	419 aa	Known RBP	6.59	□□□□□ -1.35
FARP1-238	ENST00000602015	MENT	Q9BUN1	341 aa		6.59	□□□□□ -1.35
FARP1-238	ENST00000602015	KATNBL1	Q9H079	304 aa		6.59	□□□□□ -1.35
FARP1-238	ENST00000602015	PCED1A	Q9H1Q7	454 aa		6.59	□□□□□ -1.35
FARP1-238	ENST00000602015	KIAA1522	Q9P206	1035 aa	Predicted RBP	6.59	□□□□□ -1.35
FARP1-238	ENST00000602015	RBPJL	Q9UBG7	517 aa		6.59	□□□□□ -1.35
FARP1-238	ENST00000602015	ZFP69B	Q9UJL9	534 aa		6.59	□□□□□ -1.35
FARP1-238	ENST00000602015	IQSEC2	Q5JU85	1478 aa		6.59	□□□□□ -1.36
FARP1-238	ENST00000602015		A0A1W2PQU0	124 aa		6.58	□□□□□ -1.36
FARP1-238	ENST00000602015		H0Y858	1186 aa		6.58	□□□□□ -1.36
FARP1-238	ENST00000602015	GJB6	O95452	261 aa		6.58	□□□□□ -1.36
FARP1-238	ENST00000602015	GNAT1	P11488	350 aa		6.58	□□□□□ -1.36
FARP1-238	ENST00000602015	GRK2	P25098	689 aa		6.58	□□□□□ -1.36
FARP1-238	ENST00000602015	GRK3	P35626	688 aa		6.58	□□□□□ -1.36
FARP1-238	ENST00000602015	ETFB	P38117	255 aa		6.58	□□□□□ -1.36
FARP1-238	ENST00000602015	GRIA2	P42262	883 aa		6.58	□□□□□ -1.36
FARP1-238	ENST00000602015	GIMAP8	Q8ND71	665 aa	Predicted RBP	6.58	□□□□□ -1.36
FARP1-238	ENST00000602015	MICAL1	Q8TDZ2	1067 aa		6.58	□□□□□ -1.36
FARP1-238	ENST00000602015	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	6.58	□□□□□ -1.36
FARP1-238	ENST00000602015	KCND1	Q9NSA2	647 aa		6.58	□□□□□ -1.36
FARP1-238	ENST00000602015	HS3ST3A1	Q9Y663	406 aa		6.58	□□□□□ -1.36
FARP1-238	ENST00000602015	CFAP43	Q8NDM7	1665 aa		6.58	□□□□□ -1.36
FARP1-238	ENST00000602015	MADD	Q8WXG6	1647 aa		6.58	□□□□□ -1.36
FARP1-238	ENST00000602015	OVOL3	O00110	214 aa		6.57	□□□□□ -1.36
FARP1-238	ENST00000602015	DLX3	O60479	287 aa		6.57	□□□□□ -1.36
FARP1-238	ENST00000602015	CUTA	O60888	179 aa		6.57	□□□□□ -1.36
FARP1-238	ENST00000602015	CSF2RB	P32927	897 aa		6.57	□□□□□ -1.36
FARP1-238	ENST00000602015	PFKP	Q01813	784 aa		6.57	□□□□□ -1.36
FARP1-238	ENST00000602015	USP10	Q14694	798 aa	Known RBP	6.57	□□□□□ -1.36
FARP1-238	ENST00000602015	TCTN3	Q6NUS6	607 aa		6.57	□□□□□ -1.36
FARP1-238	ENST00000602015	LBX2	Q6XYB7	198 aa		6.57	□□□□□ -1.36
FARP1-238	ENST00000602015	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	6.57	□□□□□ -1.36
FARP1-238	ENST00000602015	CARD11	Q9BXL7	1154 aa		6.57	□□□□□ -1.36
FARP1-238	ENST00000602015	ZNF341	Q9BYN7	854 aa		6.57	□□□□□ -1.36
FARP1-238	ENST00000602015	DSE	Q9UL01	958 aa		6.57	□□□□□ -1.36
FARP1-238	ENST00000602015	DISP1	Q96F81	1524 aa		6.56	□□□□□ -1.36
FARP1-238	ENST00000602015	MSC	O60682	206 aa		6.56	□□□□□ -1.36
FARP1-238	ENST00000602015	GLRB	P48167	497 aa		6.56	□□□□□ -1.36
FARP1-238	ENST00000602015	EPHA5	P54756	1037 aa		6.56	□□□□□ -1.36
FARP1-238	ENST00000602015	CD276	Q5ZPR3	534 aa		6.56	□□□□□ -1.36
FARP1-238	ENST00000602015	DPP8	Q6V1X1	898 aa	Predicted RBP	6.56	□□□□□ -1.36
FARP1-238	ENST00000602015	STPG3	Q8N7X2	389 aa		6.56	□□□□□ -1.36
FARP1-238	ENST00000602015	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	6.56	□□□□□ -1.36
FARP1-238	ENST00000602015	EDA	Q92838	391 aa		6.56	□□□□□ -1.36
FARP1-238	ENST00000602015	ZFR2	Q9UPR6	939 aa	Known RBP	6.56	□□□□□ -1.36
FARP1-238	ENST00000602015	ZCCHC11	Q5TAX3	1644 aa	Known RBP	6.56	□□□□□ -1.36
FARP1-238	ENST00000602015	TTBK1	Q5TCY1	1321 aa	Predicted RBP	6.55	□□□□□ -1.36
FARP1-238	ENST00000602015	ZNF839	A8K0R7	811 aa		6.55	□□□□□ -1.36
FARP1-238	ENST00000602015	FAM47E-STBD1	D6RA91	191 aa		6.55	□□□□□ -1.36
FARP1-238	ENST00000602015	ERCC5	P28715	1186 aa	Predicted RBP	6.55	□□□□□ -1.36
FARP1-238	ENST00000602015	RAC3	P60763	192 aa		6.55	□□□□□ -1.36
FARP1-238	ENST00000602015	GPR85	P60893	370 aa		6.55	□□□□□ -1.36
FARP1-238	ENST00000602015	FOXE3	Q13461	319 aa		6.55	□□□□□ -1.36
FARP1-238	ENST00000602015	HABP4	Q5JVS0	413 aa	Known RBP	6.55	□□□□□ -1.36
FARP1-238	ENST00000602015	IFNL3	Q8IZI9	196 aa		6.55	□□□□□ -1.36

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