RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 ITGB3BPQ13352 177 aaPredicted RBP13.13□□□□□ -0.31
CHMP2A-207ENST00000600804 PPP2R5CQ13362 524 aa13.13□□□□□ -0.31
CHMP2A-207ENST00000600804 PDIA5Q14554 519 aa13.13□□□□□ -0.31
CHMP2A-207ENST00000600804 CCDC144BQ3MJ40 725 aa13.13□□□□□ -0.31
CHMP2A-207ENST00000600804 TMEM240Q5SV17 173 aa13.13□□□□□ -0.31
CHMP2A-207ENST00000600804 EEPD1Q7L9B9 569 aa13.13□□□□□ -0.31
CHMP2A-207ENST00000600804 RDM1Q8NG50 284 aa13.13□□□□□ -0.31
CHMP2A-207ENST00000600804 ZNF577Q9BSK1 485 aa13.13□□□□□ -0.31
CHMP2A-207ENST00000600804 PBX4Q9BYU1 374 aa13.13□□□□□ -0.31
CHMP2A-207ENST00000600804 ZNF576Q9H609 170 aa13.13□□□□□ -0.31
CHMP2A-207ENST00000600804 PDGFCQ9NRA1 345 aa13.13□□□□□ -0.31
CHMP2A-207ENST00000600804 RAPGEFL1Q9UHV5 662 aa13.13□□□□□ -0.31
CHMP2A-207ENST00000600804 ZHX1Q9UKY1 873 aaPredicted RBP13.13□□□□□ -0.31
CHMP2A-207ENST00000600804 GNEQ9Y223 722 aaKnown RBP13.13□□□□□ -0.31
CHMP2A-207ENST00000600804 SRPRBQ9Y5M8 271 aaKnown RBP13.13□□□□□ -0.31
CHMP2A-207ENST00000600804 PRRC2BQ5JSZ5 2229 aaKnown RBP13.13□□□□□ -0.31
CHMP2A-207ENST00000600804 MYH9P35579 1960 aaKnown RBP13.12□□□□□ -0.31
CHMP2A-207ENST00000600804 DOCK5Q9H7D0 1870 aa13.12□□□□□ -0.31
CHMP2A-207ENST00000600804 COL4A4P53420 1690 aaPredicted RBP13.12□□□□□ -0.31
CHMP2A-207ENST00000600804 MOXD2PA6NHM9 499 aa13.12□□□□□ -0.31
CHMP2A-207ENST00000600804 SPTLC2O15270 562 aa13.12□□□□□ -0.31
CHMP2A-207ENST00000600804 DUSP11O75319 330 aaKnown RBP13.12□□□□□ -0.31
CHMP2A-207ENST00000600804 ARIH2O95376 493 aa13.12□□□□□ -0.31
CHMP2A-207ENST00000600804 ASGR1P07306 291 aa13.12□□□□□ -0.31
CHMP2A-207ENST00000600804 TXNP10599 105 aaKnown RBP13.12□□□□□ -0.31
CHMP2A-207ENST00000600804 CST5P28325 142 aaPredicted RBP13.12□□□□□ -0.31
CHMP2A-207ENST00000600804 KRT76Q01546 638 aa13.12□□□□□ -0.31
CHMP2A-207ENST00000600804 SP2Q02086 613 aa13.12□□□□□ -0.31
CHMP2A-207ENST00000600804 TNFAIP2Q03169 654 aa13.12□□□□□ -0.31
CHMP2A-207ENST00000600804 SPIRE1Q08AE8 756 aa13.12□□□□□ -0.31
CHMP2A-207ENST00000600804 LAMC2Q13753 1193 aa13.12□□□□□ -0.31
CHMP2A-207ENST00000600804 ADGRE1Q14246 886 aa13.12□□□□□ -0.31
CHMP2A-207ENST00000600804 STK38Q15208 465 aa13.12□□□□□ -0.31
CHMP2A-207ENST00000600804 CELF3Q5SZQ8 465 aaKnown RBP13.12□□□□□ -0.31
CHMP2A-207ENST00000600804 LRCH2Q5VUJ6 765 aa13.12□□□□□ -0.31
CHMP2A-207ENST00000600804 MFSD5Q6N075 450 aa13.12□□□□□ -0.31
CHMP2A-207ENST00000600804 ZNF746Q6NUN9 644 aaPredicted RBP13.12□□□□□ -0.31
CHMP2A-207ENST00000600804 IGSF22Q8N9C0 903 aa13.12□□□□□ -0.31
CHMP2A-207ENST00000600804 ZNF579Q8NAF0 562 aaKnown RBP13.12□□□□□ -0.31
CHMP2A-207ENST00000600804 TMEM87AQ8NBN3 555 aa13.12□□□□□ -0.31
CHMP2A-207ENST00000600804 LEO1Q8WVC0 666 aaPredicted RBP13.12□□□□□ -0.31
CHMP2A-207ENST00000600804 TIFAQ96CG3 184 aa13.12□□□□□ -0.31
CHMP2A-207ENST00000600804 ZFP91Q96JP5 570 aaPredicted RBP13.12□□□□□ -0.31
CHMP2A-207ENST00000600804 AK8Q96MA6 479 aa13.12□□□□□ -0.31
CHMP2A-207ENST00000600804 SDF4Q9BRK5 362 aa13.12□□□□□ -0.31
CHMP2A-207ENST00000600804 FTOQ9C0B1 505 aaKnown RBP eCLIP13.12□□□□□ -0.31
CHMP2A-207ENST00000600804 UPF3AQ9H1J1 476 aaKnown RBP13.12□□□□□ -0.31
CHMP2A-207ENST00000600804 VAV3Q9UKW4 847 aa13.12□□□□□ -0.31
CHMP2A-207ENST00000600804 PCDHA12Q9UN75 941 aa13.12□□□□□ -0.31
CHMP2A-207ENST00000600804 STK24Q9Y6E0 443 aa13.12□□□□□ -0.31
CHMP2A-207ENST00000600804 SLC26A4O43511 780 aa13.11□□□□□ -0.31
CHMP2A-207ENST00000600804 GAS7O60861 476 aa13.11□□□□□ -0.31
CHMP2A-207ENST00000600804 GH1P01241 217 aa13.11□□□□□ -0.31
CHMP2A-207ENST00000600804 ACRP10323 421 aa13.11□□□□□ -0.31
CHMP2A-207ENST00000600804 HOXD8P13378 290 aaPredicted RBP13.11□□□□□ -0.31
CHMP2A-207ENST00000600804 CSF2RAP15509 400 aa13.11□□□□□ -0.31
CHMP2A-207ENST00000600804 SMPD1P17405 629 aa13.11□□□□□ -0.31
CHMP2A-207ENST00000600804 SFNP31947 248 aa13.11□□□□□ -0.31
CHMP2A-207ENST00000600804 ARHGAP1Q07960 439 aa13.11□□□□□ -0.31
CHMP2A-207ENST00000600804 CSPP1Q1MSJ5 1256 aa13.11□□□□□ -0.31
CHMP2A-207ENST00000600804 TJAP1Q5JTD0 557 aa13.11□□□□□ -0.31
CHMP2A-207ENST00000600804 DTHD1Q6ZMT9 781 aa13.11□□□□□ -0.31
CHMP2A-207ENST00000600804 FAM126BQ8IXS8 530 aa13.11□□□□□ -0.31
CHMP2A-207ENST00000600804 SMAP1Q8IYB5 467 aaPredicted RBP13.11□□□□□ -0.31
CHMP2A-207ENST00000600804 TEKT3Q9BXF9 490 aa13.11□□□□□ -0.31
CHMP2A-207ENST00000600804 RAB34Q9BZG1 259 aa13.11□□□□□ -0.31
CHMP2A-207ENST00000600804 PRDM12Q9H4Q4 367 aa13.11□□□□□ -0.31
CHMP2A-207ENST00000600804 TTC12Q9H892 705 aaPredicted RBP13.11□□□□□ -0.31
CHMP2A-207ENST00000600804 JPH1Q9HDC5 661 aaPredicted RBP13.11□□□□□ -0.31
CHMP2A-207ENST00000600804 TFIP11Q9UBB9 837 aaKnown RBP13.11□□□□□ -0.31
CHMP2A-207ENST00000600804 FBXO2Q9UK22 296 aaPredicted RBP13.11□□□□□ -0.31
CHMP2A-207ENST00000600804 BRWD1Q9NSI6 2320 aa13.11□□□□□ -0.31
CHMP2A-207ENST00000600804 UMODL1Q5DID0 1318 aa13.11□□□□□ -0.31
CHMP2A-207ENST00000600804 SCN10AQ9Y5Y9 1956 aa13.11□□□□□ -0.31
CHMP2A-207ENST00000600804 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.1□□□□□ -0.31
CHMP2A-207ENST00000600804 DCDC2CA8MYV0 355 aa13.1□□□□□ -0.31
CHMP2A-207ENST00000600804 MARCH6O60337 910 aa13.1□□□□□ -0.31
CHMP2A-207ENST00000600804 ATG7O95352 703 aa13.1□□□□□ -0.31
CHMP2A-207ENST00000600804 GGPS1O95749 300 aa13.1□□□□□ -0.31
CHMP2A-207ENST00000600804 LONP1P36776 959 aaKnown RBP13.1□□□□□ -0.31
CHMP2A-207ENST00000600804 GJA9P57773 515 aa13.1□□□□□ -0.31
CHMP2A-207ENST00000600804 IL17AQ16552 155 aa13.1□□□□□ -0.31
CHMP2A-207ENST00000600804 LY6KQ17RY6 165 aa13.1□□□□□ -0.31
CHMP2A-207ENST00000600804 TMEM266Q2M3C6 531 aa13.1□□□□□ -0.31
CHMP2A-207ENST00000600804 ZNF365Q70YC5 407 aa13.1□□□□□ -0.31
CHMP2A-207ENST00000600804 KCTD17Q8N5Z5 321 aa13.1□□□□□ -0.31
CHMP2A-207ENST00000600804 KRI1Q8N9T8 703 aaKnown RBP13.1□□□□□ -0.31
CHMP2A-207ENST00000600804 PPTC7Q8NI37 304 aa13.1□□□□□ -0.31
CHMP2A-207ENST00000600804 VWCEQ96DN2 955 aa13.1□□□□□ -0.31
CHMP2A-207ENST00000600804 SPATA32Q96LK8 384 aa13.1□□□□□ -0.31
CHMP2A-207ENST00000600804 PPP1R12CQ9BZL4 782 aa13.1□□□□□ -0.31
CHMP2A-207ENST00000600804 CXXC1Q9P0U4 656 aaPredicted RBP13.1□□□□□ -0.31
CHMP2A-207ENST00000600804 SLC9A2Q9UBY0 812 aa13.1□□□□□ -0.31
CHMP2A-207ENST00000600804 IGKV6D-21A0A0A0MT36 114 aa13.09□□□□□ -0.31
CHMP2A-207ENST00000600804 A6NJR5 290 aa13.09□□□□□ -0.31
CHMP2A-207ENST00000600804 WDR64B1ANS9 1081 aa13.09□□□□□ -0.31
CHMP2A-207ENST00000600804 ARVCFO00192 962 aa13.09□□□□□ -0.31
CHMP2A-207ENST00000600804 CUTAO60888 179 aa13.09□□□□□ -0.31
CHMP2A-207ENST00000600804 CD4P01730 458 aa13.09□□□□□ -0.31
CHMP2A-207ENST00000600804 C6orf222P0C671 652 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms