RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 HDAC6Q9UBN7 1215 aa14.66□□□□□ -0.06
SRRM1-223ENST00000600523 POTEB3A0JP26 581 aa14.65□□□□□ -0.06
SRRM1-223ENST00000600523 TIMP1P01033 207 aa14.65□□□□□ -0.06
SRRM1-223ENST00000600523 RPLP2P05387 115 aaKnown RBP14.65□□□□□ -0.06
SRRM1-223ENST00000600523 TMEM266Q2M3C6 531 aa14.65□□□□□ -0.06
SRRM1-223ENST00000600523 POTEBQ6S5H4 581 aa14.65□□□□□ -0.06
SRRM1-223ENST00000600523 TMEM199Q8N511 208 aa14.65□□□□□ -0.06
SRRM1-223ENST00000600523 AFAP1L1Q8TED9 768 aa14.65□□□□□ -0.06
SRRM1-223ENST00000600523 RAB34Q9BZG1 259 aa14.65□□□□□ -0.06
SRRM1-223ENST00000600523 NRBP2Q9NSY0 501 aa14.65□□□□□ -0.06
SRRM1-223ENST00000600523 CEP131Q9UPN4 1083 aa14.65□□□□□ -0.06
SRRM1-223ENST00000600523 SCN10AQ9Y5Y9 1956 aa14.64□□□□□ -0.07
SRRM1-223ENST00000600523 IGKV6D-21A0A0A0MT36 114 aa14.64□□□□□ -0.07
SRRM1-223ENST00000600523 LAD1O00515 517 aa14.64□□□□□ -0.07
SRRM1-223ENST00000600523 EDIL3O43854 480 aa14.64□□□□□ -0.07
SRRM1-223ENST00000600523 HBP1O60381 514 aa14.64□□□□□ -0.07
SRRM1-223ENST00000600523 TXKP42681 527 aa14.64□□□□□ -0.07
SRRM1-223ENST00000600523 PPP2R5CQ13362 524 aa14.64□□□□□ -0.07
SRRM1-223ENST00000600523 ZNF174Q15697 407 aa14.64□□□□□ -0.07
SRRM1-223ENST00000600523 GDF6Q6KF10 455 aaPredicted RBP14.64□□□□□ -0.07
SRRM1-223ENST00000600523 RSPH3Q86UC2 560 aa14.64□□□□□ -0.07
SRRM1-223ENST00000600523 ERMNQ8TAM6 284 aa14.64□□□□□ -0.07
SRRM1-223ENST00000600523 CAGE1Q8TC20 777 aa14.64□□□□□ -0.07
SRRM1-223ENST00000600523 ATP8B4Q8TF62 1192 aa14.64□□□□□ -0.07
SRRM1-223ENST00000600523 UNC45AQ9H3U1 944 aa14.64□□□□□ -0.07
SRRM1-223ENST00000600523 TTC12Q9H892 705 aaPredicted RBP14.64□□□□□ -0.07
SRRM1-223ENST00000600523 GABBR1Q9UBS5 961 aa14.64□□□□□ -0.07
SRRM1-223ENST00000600523 TBX21Q9UL17 535 aa14.64□□□□□ -0.07
SRRM1-223ENST00000600523 KIF28PB7ZC32 967 aa14.63□□□□□ -0.07
SRRM1-223ENST00000600523 PITPNM1O00562 1244 aa14.63□□□□□ -0.07
SRRM1-223ENST00000600523 OR52Z1P0C646 297 aa14.63□□□□□ -0.07
SRRM1-223ENST00000600523 SYT1P21579 422 aa14.63□□□□□ -0.07
SRRM1-223ENST00000600523 PTK7Q13308 1070 aa14.63□□□□□ -0.07
SRRM1-223ENST00000600523 GRIK4Q16099 956 aa14.63□□□□□ -0.07
SRRM1-223ENST00000600523 NCAPH2Q6IBW4 605 aa14.63□□□□□ -0.07
SRRM1-223ENST00000600523 TAF2Q6P1X5 1199 aa14.63□□□□□ -0.07
SRRM1-223ENST00000600523 CCDC60Q8IWA6 550 aaPredicted RBP14.63□□□□□ -0.07
SRRM1-223ENST00000600523 BBXQ8WY36 941 aaPredicted RBP14.63□□□□□ -0.07
SRRM1-223ENST00000600523 PPP1R12CQ9BZL4 782 aa14.63□□□□□ -0.07
SRRM1-223ENST00000600523 RNPEPQ9H4A4 650 aa14.63□□□□□ -0.07
SRRM1-223ENST00000600523 SETD4Q9NVD3 440 aa14.63□□□□□ -0.07
SRRM1-223ENST00000600523 TELO2Q9Y4R8 837 aa14.63□□□□□ -0.07
SRRM1-223ENST00000600523 STK24Q9Y6E0 443 aa14.63□□□□□ -0.07
SRRM1-223ENST00000600523 DOCK5Q9H7D0 1870 aa14.63□□□□□ -0.07
SRRM1-223ENST00000600523 TRIM43BA6NCK2 446 aa14.62□□□□□ -0.07
SRRM1-223ENST00000600523 STX6O43752 255 aa14.62□□□□□ -0.07
SRRM1-223ENST00000600523 PARNO95453 639 aaKnown RBP14.62□□□□□ -0.07
SRRM1-223ENST00000600523 BMP15O95972 392 aa14.62□□□□□ -0.07
SRRM1-223ENST00000600523 CYP2C9P11712 490 aa14.62□□□□□ -0.07
SRRM1-223ENST00000600523 IGBP1P78318 339 aa14.62□□□□□ -0.07
SRRM1-223ENST00000600523 MDM2Q00987 491 aaPredicted RBP14.62□□□□□ -0.07
SRRM1-223ENST00000600523 FPGSQ05932 587 aa14.62□□□□□ -0.07
SRRM1-223ENST00000600523 PLCB4Q15147 1175 aa14.62□□□□□ -0.07
SRRM1-223ENST00000600523 ZNF484Q5JVG2 852 aa14.62□□□□□ -0.07
SRRM1-223ENST00000600523 PDE4DIPQ5VU43 2346 aa14.62□□□□□ -0.07
SRRM1-223ENST00000600523 MFSD5Q6N075 450 aa14.62□□□□□ -0.07
SRRM1-223ENST00000600523 SH3RF1Q7Z6J0 888 aa14.62□□□□□ -0.07
SRRM1-223ENST00000600523 NEK9Q8TD19 979 aa14.62□□□□□ -0.07
SRRM1-223ENST00000600523 PPP1R13LQ8WUF5 828 aa14.62□□□□□ -0.07
SRRM1-223ENST00000600523 HAS1Q92839 578 aa14.62□□□□□ -0.07
SRRM1-223ENST00000600523 BADQ92934 168 aa14.62□□□□□ -0.07
SRRM1-223ENST00000600523 GJA10Q969M2 543 aa14.62□□□□□ -0.07
SRRM1-223ENST00000600523 TRIM43Q96BQ3 446 aaPredicted RBP14.62□□□□□ -0.07
SRRM1-223ENST00000600523 NOC4LQ9BVI4 516 aaKnown RBP14.62□□□□□ -0.07
SRRM1-223ENST00000600523 UBE2OQ9C0C9 1292 aaKnown RBP14.62□□□□□ -0.07
SRRM1-223ENST00000600523 ZSCAN16Q9H4T2 348 aaPredicted RBP14.62□□□□□ -0.07
SRRM1-223ENST00000600523 DAXXQ9UER7 740 aaPredicted RBP14.62□□□□□ -0.07
SRRM1-223ENST00000600523 TUBE1Q9UJT0 475 aa14.62□□□□□ -0.07
SRRM1-223ENST00000600523 MAFBQ9Y5Q3 323 aaPredicted RBP14.62□□□□□ -0.07
SRRM1-223ENST00000600523 COL1A2P08123 1366 aa14.61□□□□□ -0.07
SRRM1-223ENST00000600523 ALPK3Q96L96 1907 aa14.61□□□□□ -0.07
SRRM1-223ENST00000600523 CAND2O75155 1236 aa14.61□□□□□ -0.07
SRRM1-223ENST00000600523 OATP04181 439 aa14.61□□□□□ -0.07
SRRM1-223ENST00000600523 P4HBP07237 508 aaKnown RBP14.61□□□□□ -0.07
SRRM1-223ENST00000600523 INSRRP14616 1297 aa14.61□□□□□ -0.07
SRRM1-223ENST00000600523 MAGEA10P43363 369 aaPredicted RBP14.61□□□□□ -0.07
SRRM1-223ENST00000600523 QARSP47897 775 aaKnown RBP14.61□□□□□ -0.07
SRRM1-223ENST00000600523 PSMC5P62195 406 aa14.61□□□□□ -0.07
SRRM1-223ENST00000600523 PPIGQ13427 754 aaKnown RBP eCLIP14.61□□□□□ -0.07
SRRM1-223ENST00000600523 EPHA7Q15375 998 aa14.61□□□□□ -0.07
SRRM1-223ENST00000600523 SERINC5Q86VE9 423 aa14.61□□□□□ -0.07
SRRM1-223ENST00000600523 RPUSD2Q8IZ73 545 aaKnown RBP14.61□□□□□ -0.07
SRRM1-223ENST00000600523 LMBR1Q8WVP7 490 aa14.61□□□□□ -0.07
SRRM1-223ENST00000600523 CCDC43Q96MW1 224 aaKnown RBP14.61□□□□□ -0.07
SRRM1-223ENST00000600523 MTMR9Q96QG7 549 aa14.61□□□□□ -0.07
SRRM1-223ENST00000600523 PCYT2Q99447 389 aa14.61□□□□□ -0.07
SRRM1-223ENST00000600523 VAV3Q9UKW4 847 aa14.61□□□□□ -0.07
SRRM1-223ENST00000600523 M0QZ92 97 aa14.6□□□□□ -0.07
SRRM1-223ENST00000600523 CYP2C18P33260 490 aa14.6□□□□□ -0.07
SRRM1-223ENST00000600523 RFC2P35250 354 aa14.6□□□□□ -0.07
SRRM1-223ENST00000600523 THPOP40225 353 aa14.6□□□□□ -0.07
SRRM1-223ENST00000600523 PRKCEQ02156 737 aa14.6□□□□□ -0.07
SRRM1-223ENST00000600523 PTGDRQ13258 359 aa14.6□□□□□ -0.07
SRRM1-223ENST00000600523 XKR3Q5GH77 459 aa14.6□□□□□ -0.07
SRRM1-223ENST00000600523 HAUS3Q68CZ6 603 aa14.6□□□□□ -0.07
SRRM1-223ENST00000600523 DTHD1Q6ZMT9 781 aa14.6□□□□□ -0.07
SRRM1-223ENST00000600523 OTUD6AQ7L8S5 288 aa14.6□□□□□ -0.07
SRRM1-223ENST00000600523 TRMT1LQ7Z2T5 733 aaKnown RBP14.6□□□□□ -0.07
SRRM1-223ENST00000600523 FERMT3Q86UX7 667 aa14.6□□□□□ -0.07
SRRM1-223ENST00000600523 EXOC8Q8IYI6 725 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms