RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 ZBTB39O15060 712 aa16.89■□□□□ 0.29
VRK3-218ENST00000600031 RHOBTB3O94955 611 aa16.89■□□□□ 0.29
VRK3-218ENST00000600031 SKILP12757 684 aa16.89■□□□□ 0.29
VRK3-218ENST00000600031 ICAM3P32942 547 aa16.89■□□□□ 0.29
VRK3-218ENST00000600031 SP2Q02086 613 aa16.89■□□□□ 0.29
VRK3-218ENST00000600031 CNNM4Q6P4Q7 775 aa16.89■□□□□ 0.29
VRK3-218ENST00000600031 CCDC112Q8NEF3 446 aa16.89■□□□□ 0.29
VRK3-218ENST00000600031 PIGOQ8TEQ8 1089 aa16.89■□□□□ 0.29
VRK3-218ENST00000600031 MED15Q96RN5 788 aa16.89■□□□□ 0.29
VRK3-218ENST00000600031 LRRC27Q9C0I9 530 aa16.89■□□□□ 0.29
VRK3-218ENST00000600031 DACH1Q9UI36 760 aa16.89■□□□□ 0.29
VRK3-218ENST00000600031 SAMM50Q9Y512 469 aa16.89■□□□□ 0.29
VRK3-218ENST00000600031 ADGRA2Q96PE1 1338 aa16.89■□□□□ 0.29
VRK3-218ENST00000600031 DOCK5Q9H7D0 1870 aa16.89■□□□□ 0.29
VRK3-218ENST00000600031 CYP11B2P19099 503 aa16.88■□□□□ 0.29
VRK3-218ENST00000600031 KRT76Q01546 638 aa16.88■□□□□ 0.29
VRK3-218ENST00000600031 ARSHQ5FYA8 562 aa16.88■□□□□ 0.29
VRK3-218ENST00000600031 CEP135Q66GS9 1140 aa16.88■□□□□ 0.29
VRK3-218ENST00000600031 EEPD1Q7L9B9 569 aa16.88■□□□□ 0.29
VRK3-218ENST00000600031 GPBP1Q86WP2 473 aa16.88■□□□□ 0.29
VRK3-218ENST00000600031 SYT2Q8N9I0 419 aaPredicted RBP16.88■□□□□ 0.29
VRK3-218ENST00000600031 DNAJC19Q96DA6 116 aa16.88■□□□□ 0.29
VRK3-218ENST00000600031 ZIC5Q96T25 663 aa16.88■□□□□ 0.29
VRK3-218ENST00000600031 LXNQ9BS40 222 aa16.88■□□□□ 0.29
VRK3-218ENST00000600031 ZCCHC17Q9NP64 241 aaKnown RBP16.88■□□□□ 0.29
VRK3-218ENST00000600031 TELO2Q9Y4R8 837 aa16.88■□□□□ 0.29
VRK3-218ENST00000600031 PLXNB2O15031 1838 aa16.88■□□□□ 0.29
VRK3-218ENST00000600031 LRRC37A2A6NM11 1700 aa16.88■□□□□ 0.29
VRK3-218ENST00000600031 COBLO75128 1261 aa16.88■□□□□ 0.29
VRK3-218ENST00000600031 EYA4O95677 639 aa16.88■□□□□ 0.29
VRK3-218ENST00000600031 MUTP22033 750 aa16.88■□□□□ 0.29
VRK3-218ENST00000600031 ADORA2AP29274 412 aa16.88■□□□□ 0.29
VRK3-218ENST00000600031 INHBEP58166 350 aa16.88■□□□□ 0.29
VRK3-218ENST00000600031 TAF1CQ15572 869 aaPredicted RBP16.88■□□□□ 0.29
VRK3-218ENST00000600031 UNC13DQ70J99 1090 aa16.88■□□□□ 0.29
VRK3-218ENST00000600031 KCTD17Q8N5Z5 321 aa16.88■□□□□ 0.29
VRK3-218ENST00000600031 NEK9Q8TD19 979 aa16.88■□□□□ 0.29
VRK3-218ENST00000600031 BHMT2Q9H2M3 363 aa16.88■□□□□ 0.29
VRK3-218ENST00000600031 NFASCO94856 1347 aa16.88■□□□□ 0.29
VRK3-218ENST00000600031 NPHP3-ACAD11A0A0J9YXS1 232 aa16.87■□□□□ 0.29
VRK3-218ENST00000600031 B4DLN1 442 aa16.87■□□□□ 0.29
VRK3-218ENST00000600031 IKBKBO14920 756 aa16.87■□□□□ 0.29
VRK3-218ENST00000600031 SORBS3O60504 671 aa16.87■□□□□ 0.29
VRK3-218ENST00000600031 P4HBP07237 508 aaKnown RBP16.87■□□□□ 0.29
VRK3-218ENST00000600031 CCZ1BP86790 482 aa16.87■□□□□ 0.29
VRK3-218ENST00000600031 CCZ1P86791 482 aaPredicted RBP16.87■□□□□ 0.29
VRK3-218ENST00000600031 KLHL10Q6JEL2 608 aa16.87■□□□□ 0.29
VRK3-218ENST00000600031 GPR142Q7Z601 462 aa16.87■□□□□ 0.29
VRK3-218ENST00000600031 TRMT44Q8IYL2 757 aaKnown RBP16.87■□□□□ 0.29
VRK3-218ENST00000600031 HPS3Q969F9 1004 aa16.87■□□□□ 0.29
VRK3-218ENST00000600031 SENP7Q9BQF6 1050 aa16.87■□□□□ 0.29
VRK3-218ENST00000600031 EXOC1Q9NV70 894 aa16.87■□□□□ 0.29
VRK3-218ENST00000600031 MCM3APO60318 1980 aa16.87■□□□□ 0.29
VRK3-218ENST00000600031 PVALEFA0A1B0GWK0 134 aa16.87■□□□□ 0.29
VRK3-218ENST00000600031 WDR64B1ANS9 1081 aa16.87■□□□□ 0.29
VRK3-218ENST00000600031 STRNO43815 780 aa16.87■□□□□ 0.29
VRK3-218ENST00000600031 IDEP14735 1019 aa16.87■□□□□ 0.29
VRK3-218ENST00000600031 MYL5Q02045 173 aa16.87■□□□□ 0.29
VRK3-218ENST00000600031 PTPN14Q15678 1187 aa16.87■□□□□ 0.29
VRK3-218ENST00000600031 ZNF792Q3KQV3 632 aa16.87■□□□□ 0.29
VRK3-218ENST00000600031 ZNF746Q6NUN9 644 aaPredicted RBP16.87■□□□□ 0.29
VRK3-218ENST00000600031 FILIP1Q7Z7B0 1213 aa16.87■□□□□ 0.29
VRK3-218ENST00000600031 ABRAQ8N0Z2 381 aa16.87■□□□□ 0.29
VRK3-218ENST00000600031 GIMAP8Q8ND71 665 aaPredicted RBP16.87■□□□□ 0.29
VRK3-218ENST00000600031 HHIPL1Q96JK4 782 aa16.87■□□□□ 0.29
VRK3-218ENST00000600031 JPH1Q9HDC5 661 aaPredicted RBP16.87■□□□□ 0.29
VRK3-218ENST00000600031 MAPK8IP1Q9UQF2 711 aa16.87■□□□□ 0.29
VRK3-218ENST00000600031 KIF2AO00139 706 aaPredicted RBP16.86■□□□□ 0.29
VRK3-218ENST00000600031 ERCC5P28715 1186 aaPredicted RBP16.86■□□□□ 0.29
VRK3-218ENST00000600031 SFNP31947 248 aa16.86■□□□□ 0.29
VRK3-218ENST00000600031 PRCPP42785 496 aa16.86■□□□□ 0.29
VRK3-218ENST00000600031 JAK3P52333 1124 aa16.86■□□□□ 0.29
VRK3-218ENST00000600031 CACNB1Q02641 598 aaPredicted RBP16.86■□□□□ 0.29
VRK3-218ENST00000600031 STK4Q13043 487 aa16.86■□□□□ 0.29
VRK3-218ENST00000600031 GRM1Q13255 1194 aa16.86■□□□□ 0.29
VRK3-218ENST00000600031 UGCGQ16739 394 aa16.86■□□□□ 0.29
VRK3-218ENST00000600031 NYAP1Q6ZVC0 841 aa16.86■□□□□ 0.29
VRK3-218ENST00000600031 MORC4Q8TE76 937 aa16.86■□□□□ 0.29
VRK3-218ENST00000600031 CCDC47Q96A33 483 aaKnown RBP16.86■□□□□ 0.29
VRK3-218ENST00000600031 NACC1Q96RE7 527 aa16.86■□□□□ 0.29
VRK3-218ENST00000600031 MPHOSPH6Q99547 160 aaKnown RBP16.86■□□□□ 0.29
VRK3-218ENST00000600031 ARID3AQ99856 593 aa16.86■□□□□ 0.29
VRK3-218ENST00000600031 HSD3B7Q9H2F3 369 aa16.86■□□□□ 0.29
VRK3-218ENST00000600031 BMP2KQ9NSY1 1161 aaPredicted RBP16.86■□□□□ 0.29
VRK3-218ENST00000600031 TCEAL9Q9UHQ7 104 aa16.86■□□□□ 0.29
VRK3-218ENST00000600031 IVNS1ABPQ9Y6Y0 642 aa16.86■□□□□ 0.29
VRK3-218ENST00000600031 QARSP47897 775 aaKnown RBP16.85■□□□□ 0.29
VRK3-218ENST00000600031 SP4Q02446 784 aa16.85■□□□□ 0.29
VRK3-218ENST00000600031 RAD51AP2Q09MP3 1159 aa16.85■□□□□ 0.29
VRK3-218ENST00000600031 ARID5BQ14865 1188 aa16.85■□□□□ 0.29
VRK3-218ENST00000600031 CT47A1Q5JQC4 288 aaPredicted RBP16.85■□□□□ 0.29
VRK3-218ENST00000600031 CYP4F22Q6NT55 531 aa16.85■□□□□ 0.29
VRK3-218ENST00000600031 CYFIP1Q7L576 1253 aa16.85■□□□□ 0.29
VRK3-218ENST00000600031 CCDC150Q8NCX0 1101 aa16.85■□□□□ 0.29
VRK3-218ENST00000600031 ENOX1Q8TC92 643 aaKnown RBP16.85■□□□□ 0.29
VRK3-218ENST00000600031 ZSWIM4Q9H7M6 989 aa16.85■□□□□ 0.29
VRK3-218ENST00000600031 SLC9A2Q9UBY0 812 aa16.85■□□□□ 0.29
VRK3-218ENST00000600031 PLXNA1Q9UIW2 1896 aa16.85■□□□□ 0.29
VRK3-218ENST00000600031 UBA1P22314 1058 aaKnown RBP16.85■□□□□ 0.29
VRK3-218ENST00000600031 MAPK4P31152 587 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms