RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 COG5Q9UP83 839 aa21.39■■□□□ 1.01
PNKP-213ENST00000599543 SNX14Q9Y5W7 946 aa21.39■■□□□ 1.01
PNKP-213ENST00000599543 SMCO2A6NFE2 343 aa21.38■■□□□ 1.01
PNKP-213ENST00000599543 SEC24BO95487 1268 aa21.38■■□□□ 1.01
PNKP-213ENST00000599543 HSPA4P34932 840 aa21.38■■□□□ 1.01
PNKP-213ENST00000599543 METAP2P50579 478 aaKnown RBP eCLIP21.38■■□□□ 1.01
PNKP-213ENST00000599543 HTRA4P83105 476 aaPredicted RBP21.38■■□□□ 1.01
PNKP-213ENST00000599543 AP3B2Q13367 1082 aa21.38■■□□□ 1.01
PNKP-213ENST00000599543 RUFY4Q6ZNE9 571 aa21.38■■□□□ 1.01
PNKP-213ENST00000599543 RPAINQ86UA6 219 aa21.38■■□□□ 1.01
PNKP-213ENST00000599543 RALGAPA2Q2PPJ7 1873 aa21.37■■□□□ 1.01
PNKP-213ENST00000599543 NFASCO94856 1347 aa21.37■■□□□ 1.01
PNKP-213ENST00000599543 CCDC196A0A1B0GTZ2 297 aa21.37■■□□□ 1.01
PNKP-213ENST00000599543 UPP2O95045 317 aa21.37■■□□□ 1.01
PNKP-213ENST00000599543 CHRNA1P02708 482 aa21.37■■□□□ 1.01
PNKP-213ENST00000599543 CDC27P30260 824 aa21.37■■□□□ 1.01
PNKP-213ENST00000599543 CEP55Q53EZ4 464 aa21.37■■□□□ 1.01
PNKP-213ENST00000599543 FBXO22Q8NEZ5 403 aa21.37■■□□□ 1.01
PNKP-213ENST00000599543 CYP2W1Q8TAV3 490 aa21.37■■□□□ 1.01
PNKP-213ENST00000599543 HLA-CQ95604 372 aa21.37■■□□□ 1.01
PNKP-213ENST00000599543 TOP1MTQ969P6 601 aa21.37■■□□□ 1.01
PNKP-213ENST00000599543 LOXHD1Q8IVV2 1947 aa21.37■■□□□ 1.01
PNKP-213ENST00000599543 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.36■■□□□ 1.01
PNKP-213ENST00000599543 MBLAC1A4D2B0 266 aaPredicted RBP21.36■■□□□ 1.01
PNKP-213ENST00000599543 GHRP10912 638 aa21.36■■□□□ 1.01
PNKP-213ENST00000599543 SREBF1P36956 1147 aa21.36■■□□□ 1.01
PNKP-213ENST00000599543 KCNQ1P51787 676 aa21.36■■□□□ 1.01
PNKP-213ENST00000599543 IGBP1P78318 339 aa21.36■■□□□ 1.01
PNKP-213ENST00000599543 SP7Q8TDD2 431 aaPredicted RBP21.36■■□□□ 1.01
PNKP-213ENST00000599543 TNPO1Q92973 898 aaKnown RBP21.36■■□□□ 1.01
PNKP-213ENST00000599543 JAKMIP1Q96N16 626 aaKnown RBP21.36■■□□□ 1.01
PNKP-213ENST00000599543 C17orf80Q9BSJ5 609 aa21.36■■□□□ 1.01
PNKP-213ENST00000599543 FAM217BQ9NTX9 383 aaPredicted RBP21.36■■□□□ 1.01
PNKP-213ENST00000599543 TRPC6Q9Y210 931 aa21.36■■□□□ 1.01
PNKP-213ENST00000599543 COL4A6Q14031 1691 aa21.36■■□□□ 1.01
PNKP-213ENST00000599543 RRN3P2A6NIE6 340 aa21.35■■□□□ 1.01
PNKP-213ENST00000599543 RPLP2P05387 115 aaKnown RBP21.35■■□□□ 1.01
PNKP-213ENST00000599543 BMP1P13497 986 aa21.35■■□□□ 1.01
PNKP-213ENST00000599543 ZNF76P36508 570 aa21.35■■□□□ 1.01
PNKP-213ENST00000599543 ACTR2P61160 394 aa21.35■■□□□ 1.01
PNKP-213ENST00000599543 APOBRQ0VD83 1088 aa21.35■■□□□ 1.01
PNKP-213ENST00000599543 MARCH8Q5T0T0 291 aa21.35■■□□□ 1.01
PNKP-213ENST00000599543 Q6ZUG5 572 aa21.35■■□□□ 1.01
PNKP-213ENST00000599543 DNAJB3Q8WWF6 145 aa21.35■■□□□ 1.01
PNKP-213ENST00000599543 AGO4Q9HCK5 861 aaKnown RBP21.35■■□□□ 1.01
PNKP-213ENST00000599543 TMEM260Q9NX78 707 aa21.35■■□□□ 1.01
PNKP-213ENST00000599543 ARP10275 920 aa21.34■■□□□ 1.01
PNKP-213ENST00000599543 INSRRP14616 1297 aa21.34■■□□□ 1.01
PNKP-213ENST00000599543 ADD1P35611 737 aaKnown RBP21.34■■□□□ 1.01
PNKP-213ENST00000599543 CLK2P49760 499 aaKnown RBP21.34■■□□□ 1.01
PNKP-213ENST00000599543 MGAT3Q09327 533 aa21.34■■□□□ 1.01
PNKP-213ENST00000599543 PFKFB3Q16875 520 aaPredicted RBP21.34■■□□□ 1.01
PNKP-213ENST00000599543 BLOC1S2Q6QNY1 142 aa21.34■■□□□ 1.01
PNKP-213ENST00000599543 KCNB2Q92953 911 aa21.34■■□□□ 1.01
PNKP-213ENST00000599543 BRF1Q92994 677 aa21.34■■□□□ 1.01
PNKP-213ENST00000599543 SAMD11Q96NU1 681 aa21.34■■□□□ 1.01
PNKP-213ENST00000599543 PCYT2Q99447 389 aa21.34■■□□□ 1.01
PNKP-213ENST00000599543 MYH9P35579 1960 aaKnown RBP21.34■■□□□ 1.01
PNKP-213ENST00000599543 MEIS1O00470 390 aa21.33■■□□□ 1.01
PNKP-213ENST00000599543 SCG2P13521 617 aa21.33■■□□□ 1.01
PNKP-213ENST00000599543 STAT5BP51692 787 aa21.33■■□□□ 1.01
PNKP-213ENST00000599543 ITGB3BPQ13352 177 aaPredicted RBP21.33■■□□□ 1.01
PNKP-213ENST00000599543 LPIN1Q14693 890 aa21.33■■□□□ 1.01
PNKP-213ENST00000599543 PLPPR4Q7Z2D5 763 aa21.33■■□□□ 1.01
PNKP-213ENST00000599543 CCDC12Q8WUD4 166 aaPredicted RBP21.33■■□□□ 1.01
PNKP-213ENST00000599543 FAM49AQ9H0Q0 323 aaPredicted RBP21.33■■□□□ 1.01
PNKP-213ENST00000599543 CDY2AQ9Y6F7 541 aa21.33■■□□□ 1.01
PNKP-213ENST00000599543 MRPS6P82932 125 aaKnown RBP21.32■■□□□ 1
PNKP-213ENST00000599543 PLCB4Q15147 1175 aa21.32■■□□□ 1
PNKP-213ENST00000599543 C8orf34Q49A92 452 aa21.32■■□□□ 1
PNKP-213ENST00000599543 EPC2Q52LR7 807 aa21.32■■□□□ 1
PNKP-213ENST00000599543 JAKMIP3Q5VZ66 844 aa21.32■■□□□ 1
PNKP-213ENST00000599543 NIPA1Q7RTP0 329 aa21.32■■□□□ 1
PNKP-213ENST00000599543 NECAB3Q96P71 396 aaPredicted RBP21.32■■□□□ 1
PNKP-213ENST00000599543 TTC3P53804 2025 aa21.32■■□□□ 1
PNKP-213ENST00000599543 NID2Q14112 1375 aa21.32■■□□□ 1
PNKP-213ENST00000599543 M0QZ92 97 aa21.31■■□□□ 1
PNKP-213ENST00000599543 DDX39AO00148 427 aaKnown RBP21.31■■□□□ 1
PNKP-213ENST00000599543 SLC26A2P50443 739 aa21.31■■□□□ 1
PNKP-213ENST00000599543 PTPROQ16827 1216 aa21.31■■□□□ 1
PNKP-213ENST00000599543 FBXO47Q5MNV8 452 aa21.31■■□□□ 1
PNKP-213ENST00000599543 IER5Q5VY09 327 aa21.31■■□□□ 1
PNKP-213ENST00000599543 TSHZ1Q6ZSZ6 1077 aa21.31■■□□□ 1
PNKP-213ENST00000599543 ZBTB10Q96DT7 871 aa21.31■■□□□ 1
PNKP-213ENST00000599543 C6orf50Q9HD87 102 aa21.31■■□□□ 1
PNKP-213ENST00000599543 EVPLQ92817 2033 aa21.3■■□□□ 1
PNKP-213ENST00000599543 ESYT2A0FGR8 921 aa21.3■■□□□ 1
PNKP-213ENST00000599543 POTEB3A0JP26 581 aa21.3■■□□□ 1
PNKP-213ENST00000599543 BACH1O14867 736 aa21.3■■□□□ 1
PNKP-213ENST00000599543 RPS6KB1P23443 525 aa21.3■■□□□ 1
PNKP-213ENST00000599543 PSMA5P28066 241 aa21.3■■□□□ 1
PNKP-213ENST00000599543 AKAP17AQ02040 695 aaKnown RBP21.3■■□□□ 1
PNKP-213ENST00000599543 MCTP2Q6DN12 878 aa21.3■■□□□ 1
PNKP-213ENST00000599543 POTEBQ6S5H4 581 aa21.3■■□□□ 1
PNKP-213ENST00000599543 PLA2G4DQ86XP0 818 aa21.3■■□□□ 1
PNKP-213ENST00000599543 TMEM192Q8IY95 271 aa21.3■■□□□ 1
PNKP-213ENST00000599543 REXO1Q8N1G1 1221 aaKnown RBP21.3■■□□□ 1
PNKP-213ENST00000599543 IL17RAQ96F46 866 aa21.3■■□□□ 1
PNKP-213ENST00000599543 ZMYND12Q9H0C1 365 aa21.3■■□□□ 1
PNKP-213ENST00000599543 FAM86B1E9PN63 330 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms