RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 PHOSPHO2Q8TCD6 241 aa16.03■□□□□ 0.16
LIG1-218ENST00000599322 TBCKQ8TEA7 893 aa16.03■□□□□ 0.16
LIG1-218ENST00000599322 IL17RAQ96F46 866 aa16.03■□□□□ 0.16
LIG1-218ENST00000599322 SLC9A7Q96T83 725 aa16.03■□□□□ 0.16
LIG1-218ENST00000599322 NAP1L4Q99733 375 aaKnown RBP16.03■□□□□ 0.16
LIG1-218ENST00000599322 SAMM50Q9Y512 469 aa16.03■□□□□ 0.16
LIG1-218ENST00000599322 MARCH6O60337 910 aa16.02■□□□□ 0.16
LIG1-218ENST00000599322 LGR5O75473 907 aa16.02■□□□□ 0.16
LIG1-218ENST00000599322 PSAPP07602 524 aa16.02■□□□□ 0.16
LIG1-218ENST00000599322 GRIK4Q16099 956 aa16.02■□□□□ 0.16
LIG1-218ENST00000599322 ZNF618Q5T7W0 954 aa16.02■□□□□ 0.16
LIG1-218ENST00000599322 ZNF746Q6NUN9 644 aaPredicted RBP16.02■□□□□ 0.16
LIG1-218ENST00000599322 SMAP1Q8IYB5 467 aaPredicted RBP16.02■□□□□ 0.16
LIG1-218ENST00000599322 DAGLBQ8NCG7 672 aa16.02■□□□□ 0.16
LIG1-218ENST00000599322 SLC28A3Q9HAS3 691 aa16.02■□□□□ 0.16
LIG1-218ENST00000599322 ZNF302Q9NR11 478 aa16.02■□□□□ 0.16
LIG1-218ENST00000599322 TUBE1Q9UJT0 475 aa16.02■□□□□ 0.16
LIG1-218ENST00000599322 CHD9Q3L8U1 2897 aa16.02■□□□□ 0.15
LIG1-218ENST00000599322 ABHD14A-ACY1A0A1B0GW23 586 aa16.01■□□□□ 0.15
LIG1-218ENST00000599322 GRXCR1A8MXD5 290 aa16.01■□□□□ 0.15
LIG1-218ENST00000599322 M0QZ92 97 aa16.01■□□□□ 0.15
LIG1-218ENST00000599322 SEC24BO95487 1268 aa16.01■□□□□ 0.15
LIG1-218ENST00000599322 PBX2P40425 430 aa16.01■□□□□ 0.15
LIG1-218ENST00000599322 IGBP1P78318 339 aa16.01■□□□□ 0.15
LIG1-218ENST00000599322 ITGB3BPQ13352 177 aaPredicted RBP16.01■□□□□ 0.15
LIG1-218ENST00000599322 PDXDC2PQ6P474 469 aa16.01■□□□□ 0.15
LIG1-218ENST00000599322 NECAB1Q8N987 351 aa16.01■□□□□ 0.15
LIG1-218ENST00000599322 IL27Q8NEV9 243 aa16.01■□□□□ 0.15
LIG1-218ENST00000599322 LMBR1Q8WVP7 490 aa16.01■□□□□ 0.15
LIG1-218ENST00000599322 SEPT8Q92599 483 aa16.01■□□□□ 0.15
LIG1-218ENST00000599322 DHX38Q92620 1227 aaKnown RBP16.01■□□□□ 0.15
LIG1-218ENST00000599322 GTF3C6Q969F1 213 aa16.01■□□□□ 0.15
LIG1-218ENST00000599322 ZSCAN31Q96LW9 406 aaPredicted RBP16.01■□□□□ 0.15
LIG1-218ENST00000599322 ZBED2Q9BTP6 218 aa16.01■□□□□ 0.15
LIG1-218ENST00000599322 CXXC1Q9P0U4 656 aaPredicted RBP16.01■□□□□ 0.15
LIG1-218ENST00000599322 LIMCH1Q9UPQ0 1083 aa16.01■□□□□ 0.15
LIG1-218ENST00000599322 IGLV3-22A0A075B6J6 115 aa16■□□□□ 0.15
LIG1-218ENST00000599322 POTEB3A0JP26 581 aa16■□□□□ 0.15
LIG1-218ENST00000599322 WDR64B1ANS9 1081 aa16■□□□□ 0.15
LIG1-218ENST00000599322 HBP1O60381 514 aa16■□□□□ 0.15
LIG1-218ENST00000599322 GAS7O60861 476 aa16■□□□□ 0.15
LIG1-218ENST00000599322 INSRRP14616 1297 aa16■□□□□ 0.15
LIG1-218ENST00000599322 HOXC8P31273 242 aa16■□□□□ 0.15
LIG1-218ENST00000599322 ME3Q16798 604 aa16■□□□□ 0.15
LIG1-218ENST00000599322 POTEBQ6S5H4 581 aa16■□□□□ 0.15
LIG1-218ENST00000599322 USP38Q8NB14 1042 aa16■□□□□ 0.15
LIG1-218ENST00000599322 CRYGNQ8WXF5 182 aa16■□□□□ 0.15
LIG1-218ENST00000599322 RIT2Q99578 217 aa16■□□□□ 0.15
LIG1-218ENST00000599322 TEKT3Q9BXF9 490 aa16■□□□□ 0.15
LIG1-218ENST00000599322 PBX4Q9BYU1 374 aa16■□□□□ 0.15
LIG1-218ENST00000599322 ZNF576Q9H609 170 aa16■□□□□ 0.15
LIG1-218ENST00000599322 KCNJ14Q9UNX9 436 aa16■□□□□ 0.15
LIG1-218ENST00000599322 PCDHA11Q9Y5I1 949 aa16■□□□□ 0.15
LIG1-218ENST00000599322 PCDHA10Q9Y5I2 948 aa16■□□□□ 0.15
LIG1-218ENST00000599322 TRIP12Q14669 1992 aaPredicted RBP16■□□□□ 0.15
LIG1-218ENST00000599322 TANC1Q9C0D5 1861 aa15.99■□□□□ 0.15
LIG1-218ENST00000599322 ATG7O95352 703 aa15.99■□□□□ 0.15
LIG1-218ENST00000599322 CXCL10P02778 98 aa15.99■□□□□ 0.15
LIG1-218ENST00000599322 CTSHP09668 335 aa15.99■□□□□ 0.15
LIG1-218ENST00000599322 SFNP31947 248 aa15.99■□□□□ 0.15
LIG1-218ENST00000599322 KRT2P35908 639 aa15.99■□□□□ 0.15
LIG1-218ENST00000599322 SAFBQ15424 915 aaKnown RBP eCLIP15.99■□□□□ 0.15
LIG1-218ENST00000599322 TRIM71Q2Q1W2 868 aaKnown RBP15.99■□□□□ 0.15
LIG1-218ENST00000599322 LRCH2Q5VUJ6 765 aa15.99■□□□□ 0.15
LIG1-218ENST00000599322 IER5Q5VY09 327 aa15.99■□□□□ 0.15
LIG1-218ENST00000599322 SWSAP1Q6NVH7 229 aa15.99■□□□□ 0.15
LIG1-218ENST00000599322 MOXD1Q6UVY6 613 aa15.99■□□□□ 0.15
LIG1-218ENST00000599322 ABHD15Q6UXT9 468 aa15.99■□□□□ 0.15
LIG1-218ENST00000599322 AIFM3Q96NN9 605 aa15.99■□□□□ 0.15
LIG1-218ENST00000599322 CTAGE1Q96RT6 745 aa15.99■□□□□ 0.15
LIG1-218ENST00000599322 PHF20Q9BVI0 1012 aa15.99■□□□□ 0.15
LIG1-218ENST00000599322 CEP131Q9UPN4 1083 aa15.99■□□□□ 0.15
LIG1-218ENST00000599322 TELO2Q9Y4R8 837 aa15.99■□□□□ 0.15
LIG1-218ENST00000599322 CHD7Q9P2D1 2997 aa15.98■□□□□ 0.15
LIG1-218ENST00000599322 REV3LO60673 3130 aa15.98■□□□□ 0.15
LIG1-218ENST00000599322 ST18O60284 1047 aa15.98■□□□□ 0.15
LIG1-218ENST00000599322 BAG4O95429 457 aaKnown RBP15.98■□□□□ 0.15
LIG1-218ENST00000599322 GCFC2P16383 781 aaKnown RBP15.98■□□□□ 0.15
LIG1-218ENST00000599322 JAK3P52333 1124 aa15.98■□□□□ 0.15
LIG1-218ENST00000599322 HIC1Q14526 733 aa15.98■□□□□ 0.15
LIG1-218ENST00000599322 PLCB4Q15147 1175 aa15.98■□□□□ 0.15
LIG1-218ENST00000599322 LETM2Q2VYF4 491 aa15.98■□□□□ 0.15
LIG1-218ENST00000599322 Q4G0T1 1027 aa15.98■□□□□ 0.15
LIG1-218ENST00000599322 ZNF484Q5JVG2 852 aa15.98■□□□□ 0.15
LIG1-218ENST00000599322 NEK8Q86SG6 692 aa15.98■□□□□ 0.15
LIG1-218ENST00000599322 ATP8B4Q8TF62 1192 aa15.98■□□□□ 0.15
LIG1-218ENST00000599322 APBB2Q92870 758 aa15.98■□□□□ 0.15
LIG1-218ENST00000599322 FAM167AQ96KS9 214 aa15.98■□□□□ 0.15
LIG1-218ENST00000599322 UIMC1Q96RL1 719 aa15.98■□□□□ 0.15
LIG1-218ENST00000599322 GAS2L1Q99501 681 aaPredicted RBP15.98■□□□□ 0.15
LIG1-218ENST00000599322 SH2B1Q9NRF2 756 aaPredicted RBP15.98■□□□□ 0.15
LIG1-218ENST00000599322 NRBP2Q9NSY0 501 aa15.98■□□□□ 0.15
LIG1-218ENST00000599322 DDX25Q9UHL0 483 aaKnown RBP15.98■□□□□ 0.15
LIG1-218ENST00000599322 PTPRSQ13332 1948 aa15.98■□□□□ 0.15
LIG1-218ENST00000599322 CYP3A7-CYP3A51PA0A087WV96 503 aa15.97■□□□□ 0.15
LIG1-218ENST00000599322 DHX15O43143 795 aaKnown RBP15.97■□□□□ 0.15
LIG1-218ENST00000599322 NBNO60934 754 aa15.97■□□□□ 0.15
LIG1-218ENST00000599322 CCNE2O96020 404 aa15.97■□□□□ 0.15
LIG1-218ENST00000599322 AMHP03971 560 aa15.97■□□□□ 0.15
LIG1-218ENST00000599322 CYP3A7P24462 503 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms