RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 ACTR2P61160 394 aa15.68■□□□□ 0.1
SCAF1-203ENST00000598359 IGBP1P78318 339 aa15.68■□□□□ 0.1
SCAF1-203ENST00000598359 AKAP17AQ02040 695 aaKnown RBP15.68■□□□□ 0.1
SCAF1-203ENST00000598359 PPFIA1Q13136 1202 aa15.68■□□□□ 0.1
SCAF1-203ENST00000598359 CCDC85BQ15834 202 aaPredicted RBP15.68■□□□□ 0.1
SCAF1-203ENST00000598359 GRIK4Q16099 956 aa15.68■□□□□ 0.1
SCAF1-203ENST00000598359 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.68■□□□□ 0.1
SCAF1-203ENST00000598359 SDF4Q9BRK5 362 aa15.68■□□□□ 0.1
SCAF1-203ENST00000598359 ZMYND12Q9H0C1 365 aa15.68■□□□□ 0.1
SCAF1-203ENST00000598359 GLT8D2Q9H1C3 349 aa15.68■□□□□ 0.1
SCAF1-203ENST00000598359 C6orf50Q9HD87 102 aa15.68■□□□□ 0.1
SCAF1-203ENST00000598359 ERAP1Q9NZ08 941 aa15.68■□□□□ 0.1
SCAF1-203ENST00000598359 ESYT2A0FGR8 921 aa15.67■□□□□ 0.1
SCAF1-203ENST00000598359 EPB41L2O43491 1005 aaKnown RBP15.67■□□□□ 0.1
SCAF1-203ENST00000598359 CCNE2O96020 404 aa15.67■□□□□ 0.1
SCAF1-203ENST00000598359 TAP1Q03518 808 aa15.67■□□□□ 0.1
SCAF1-203ENST00000598359 IKBKEQ14164 716 aa15.67■□□□□ 0.1
SCAF1-203ENST00000598359 MARCH8Q5T0T0 291 aa15.67■□□□□ 0.1
SCAF1-203ENST00000598359 PLA2G4DQ86XP0 818 aa15.67■□□□□ 0.1
SCAF1-203ENST00000598359 REXO1Q8N1G1 1221 aaKnown RBP15.67■□□□□ 0.1
SCAF1-203ENST00000598359 TRAPPC12Q8WVT3 735 aa15.67■□□□□ 0.1
SCAF1-203ENST00000598359 CRYGNQ8WXF5 182 aa15.67■□□□□ 0.1
SCAF1-203ENST00000598359 ZBED2Q9BTP6 218 aa15.67■□□□□ 0.1
SCAF1-203ENST00000598359 RNF26Q9BY78 433 aaPredicted RBP15.67■□□□□ 0.1
SCAF1-203ENST00000598359 TM6SF1Q9BZW5 370 aa15.67■□□□□ 0.1
SCAF1-203ENST00000598359 SMARCAD1Q9H4L7 1026 aa15.67■□□□□ 0.1
SCAF1-203ENST00000598359 PDRG1Q9NUG6 133 aa15.67■□□□□ 0.1
SCAF1-203ENST00000598359 NFASCO94856 1347 aa15.67■□□□□ 0.1
SCAF1-203ENST00000598359 EMSYQ7Z589 1322 aa15.67■□□□□ 0.1
SCAF1-203ENST00000598359 NRCAMQ92823 1304 aa15.67■□□□□ 0.1
SCAF1-203ENST00000598359 IGLV3-22A0A075B6J6 115 aa15.66■□□□□ 0.1
SCAF1-203ENST00000598359 ABHD14A-ACY1A0A1B0GW23 586 aa15.66■□□□□ 0.1
SCAF1-203ENST00000598359 PLEKHG4Q58EX7 1191 aa15.66■□□□□ 0.1
SCAF1-203ENST00000598359 MICALL1Q8N3F8 863 aa15.66■□□□□ 0.1
SCAF1-203ENST00000598359 CCDC12Q8WUD4 166 aaPredicted RBP15.66■□□□□ 0.1
SCAF1-203ENST00000598359 ATXN2LQ8WWM7 1075 aaKnown RBP15.66■□□□□ 0.1
SCAF1-203ENST00000598359 ARNTL2Q8WYA1 636 aa15.66■□□□□ 0.1
SCAF1-203ENST00000598359 TUBE1Q9UJT0 475 aa15.66■□□□□ 0.1
SCAF1-203ENST00000598359 TRPC6Q9Y210 931 aa15.66■□□□□ 0.1
SCAF1-203ENST00000598359 KIF28PB7ZC32 967 aa15.65■□□□□ 0.1
SCAF1-203ENST00000598359 CHRNA1P02708 482 aa15.65■□□□□ 0.1
SCAF1-203ENST00000598359 CYP3A4P08684 503 aa15.65■□□□□ 0.1
SCAF1-203ENST00000598359 INSRRP14616 1297 aa15.65■□□□□ 0.1
SCAF1-203ENST00000598359 SSRP1Q08945 709 aaKnown RBP15.65■□□□□ 0.1
SCAF1-203ENST00000598359 PLCB4Q15147 1175 aa15.65■□□□□ 0.1
SCAF1-203ENST00000598359 TEX2Q8IWB9 1127 aa15.65■□□□□ 0.1
SCAF1-203ENST00000598359 ADAMTS19Q8TE59 1207 aa15.65■□□□□ 0.1
SCAF1-203ENST00000598359 DNAJB3Q8WWF6 145 aa15.65■□□□□ 0.1
SCAF1-203ENST00000598359 AIFM3Q96NN9 605 aa15.65■□□□□ 0.1
SCAF1-203ENST00000598359 ASB2Q96Q27 587 aa15.65■□□□□ 0.1
SCAF1-203ENST00000598359 AZI2Q9H6S1 392 aa15.65■□□□□ 0.1
SCAF1-203ENST00000598359 REV3LO60673 3130 aa15.64■□□□□ 0.09
SCAF1-203ENST00000598359 IPO5O00410 1097 aaKnown RBP15.64■□□□□ 0.09
SCAF1-203ENST00000598359 DHX15O43143 795 aaKnown RBP15.64■□□□□ 0.09
SCAF1-203ENST00000598359 EDIL3O43854 480 aa15.64■□□□□ 0.09
SCAF1-203ENST00000598359 GJB5O95377 273 aa15.64■□□□□ 0.09
SCAF1-203ENST00000598359 GHRP10912 638 aa15.64■□□□□ 0.09
SCAF1-203ENST00000598359 GNA11P29992 359 aa15.64■□□□□ 0.09
SCAF1-203ENST00000598359 STAT5BP51692 787 aa15.64■□□□□ 0.09
SCAF1-203ENST00000598359 MKRN4PQ13434 485 aaPredicted RBP15.64■□□□□ 0.09
SCAF1-203ENST00000598359 PRR16Q569H4 304 aa15.64■□□□□ 0.09
SCAF1-203ENST00000598359 KRT40Q6A162 431 aa15.64■□□□□ 0.09
SCAF1-203ENST00000598359 NIPA1Q7RTP0 329 aa15.64■□□□□ 0.09
SCAF1-203ENST00000598359 MYOCDQ8IZQ8 938 aa15.64■□□□□ 0.09
SCAF1-203ENST00000598359 SEPT8Q92599 483 aa15.64■□□□□ 0.09
SCAF1-203ENST00000598359 ZNF274Q96GC6 653 aaPredicted RBP15.64■□□□□ 0.09
SCAF1-203ENST00000598359 FAM49AQ9H0Q0 323 aaPredicted RBP15.64■□□□□ 0.09
SCAF1-203ENST00000598359 MTUS1Q9ULD2 1270 aa15.64■□□□□ 0.09
SCAF1-203ENST00000598359 MBLAC1A4D2B0 266 aaPredicted RBP15.63■□□□□ 0.09
SCAF1-203ENST00000598359 CPLX1O14810 134 aa15.63■□□□□ 0.09
SCAF1-203ENST00000598359 BACH1O14867 736 aa15.63■□□□□ 0.09
SCAF1-203ENST00000598359 CAND2O75155 1236 aa15.63■□□□□ 0.09
SCAF1-203ENST00000598359 ATG7O95352 703 aa15.63■□□□□ 0.09
SCAF1-203ENST00000598359 NLRP5P59047 1200 aa15.63■□□□□ 0.09
SCAF1-203ENST00000598359 MGAT3Q09327 533 aa15.63■□□□□ 0.09
SCAF1-203ENST00000598359 TMEM62Q0P6H9 643 aa15.63■□□□□ 0.09
SCAF1-203ENST00000598359 FAM26DQ5JW98 314 aa15.63■□□□□ 0.09
SCAF1-203ENST00000598359 ABHD15Q6UXT9 468 aa15.63■□□□□ 0.09
SCAF1-203ENST00000598359 CCDC60Q8IWA6 550 aaPredicted RBP15.63■□□□□ 0.09
SCAF1-203ENST00000598359 TRIM22Q8IYM9 498 aa15.63■□□□□ 0.09
SCAF1-203ENST00000598359 CCDC148Q8NFR7 591 aa15.63■□□□□ 0.09
SCAF1-203ENST00000598359 ZNF577Q9BSK1 485 aa15.63■□□□□ 0.09
SCAF1-203ENST00000598359 TRANK1O15050 2925 aa15.63■□□□□ 0.09
SCAF1-203ENST00000598359 SIP14410 1827 aa15.62■□□□□ 0.09
SCAF1-203ENST00000598359 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.62■□□□□ 0.09
SCAF1-203ENST00000598359 POTEB3A0JP26 581 aa15.62■□□□□ 0.09
SCAF1-203ENST00000598359 EFCAB14O75071 495 aa15.62■□□□□ 0.09
SCAF1-203ENST00000598359 UPP2O95045 317 aa15.62■□□□□ 0.09
SCAF1-203ENST00000598359 LPIN1Q14693 890 aa15.62■□□□□ 0.09
SCAF1-203ENST00000598359 C8orf34Q49A92 452 aa15.62■□□□□ 0.09
SCAF1-203ENST00000598359 TAF2Q6P1X5 1199 aa15.62■□□□□ 0.09
SCAF1-203ENST00000598359 POTEBQ6S5H4 581 aa15.62■□□□□ 0.09
SCAF1-203ENST00000598359 PLPPR4Q7Z2D5 763 aa15.62■□□□□ 0.09
SCAF1-203ENST00000598359 TRMT1LQ7Z2T5 733 aaKnown RBP15.62■□□□□ 0.09
SCAF1-203ENST00000598359 BICD2Q8TD16 824 aa15.62■□□□□ 0.09
SCAF1-203ENST00000598359 GJA10Q969M2 543 aa15.62■□□□□ 0.09
SCAF1-203ENST00000598359 LENG9Q96B70 501 aa15.62■□□□□ 0.09
SCAF1-203ENST00000598359 UHRF1Q96T88 793 aaPredicted RBP15.62■□□□□ 0.09
SCAF1-203ENST00000598359 RAD9AQ99638 391 aa15.62■□□□□ 0.09
SCAF1-203ENST00000598359 IFIH1Q9BYX4 1025 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms