RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 CLP1Q92989 425 aaKnown RBP19.48■□□□□ 0.71
PNKP-210ENST00000597965 JPH1Q9HDC5 661 aaPredicted RBP19.48■□□□□ 0.71
PNKP-210ENST00000597965 RNF216Q9NWF9 866 aaPredicted RBP19.48■□□□□ 0.71
PNKP-210ENST00000597965 UBIAD1Q9Y5Z9 338 aa19.48■□□□□ 0.71
PNKP-210ENST00000597965 GSTTP1A0A1W2PQM5 241 aa19.47■□□□□ 0.71
PNKP-210ENST00000597965 ENPP3O14638 875 aa19.47■□□□□ 0.71
PNKP-210ENST00000597965 ATP9AO75110 1047 aa19.47■□□□□ 0.71
PNKP-210ENST00000597965 PLEKHA8P1O95397 391 aa19.47■□□□□ 0.71
PNKP-210ENST00000597965 MARK3P27448 753 aa19.47■□□□□ 0.71
PNKP-210ENST00000597965 MGAT3Q09327 533 aa19.47■□□□□ 0.71
PNKP-210ENST00000597965 BTG3Q14201 252 aaPredicted RBP19.47■□□□□ 0.71
PNKP-210ENST00000597965 NAALADL2Q58DX5 795 aa19.47■□□□□ 0.71
PNKP-210ENST00000597965 FBXO47Q5MNV8 452 aa19.47■□□□□ 0.71
PNKP-210ENST00000597965 RUFY4Q6ZNE9 571 aa19.47■□□□□ 0.71
PNKP-210ENST00000597965 FANCBQ8NB91 859 aa19.47■□□□□ 0.71
PNKP-210ENST00000597965 DNAJB3Q8WWF6 145 aa19.47■□□□□ 0.71
PNKP-210ENST00000597965 POP1Q99575 1024 aaKnown RBP19.47■□□□□ 0.71
PNKP-210ENST00000597965 SDF4Q9BRK5 362 aa19.47■□□□□ 0.71
PNKP-210ENST00000597965 UPF3BQ9BZI7 483 aaKnown RBP19.47■□□□□ 0.71
PNKP-210ENST00000597965 CD320Q9NPF0 282 aa19.47■□□□□ 0.71
PNKP-210ENST00000597965 CLDND1Q9NY35 253 aa19.47■□□□□ 0.71
PNKP-210ENST00000597965 PCDHA6Q9UN73 950 aa19.47■□□□□ 0.71
PNKP-210ENST00000597965 PCDHA8Q9Y5H6 950 aa19.47■□□□□ 0.71
PNKP-210ENST00000597965 H3BQ06 376 aaPredicted RBP19.46■□□□□ 0.71
PNKP-210ENST00000597965 SLC26A2P50443 739 aa19.46■□□□□ 0.71
PNKP-210ENST00000597965 MRPS6P82932 125 aaKnown RBP19.46■□□□□ 0.71
PNKP-210ENST00000597965 RNF20Q5VTR2 975 aa19.46■□□□□ 0.71
PNKP-210ENST00000597965 HEATR3Q7Z4Q2 680 aa19.46■□□□□ 0.71
PNKP-210ENST00000597965 KHSRPQ92945 711 aaKnown RBP eCLIP19.46■□□□□ 0.71
PNKP-210ENST00000597965 OSBPL7Q9BZF2 842 aa19.46■□□□□ 0.71
PNKP-210ENST00000597965 GLT8D2Q9H1C3 349 aa19.46■□□□□ 0.71
PNKP-210ENST00000597965 RBM28Q9NW13 759 aaKnown RBP19.46■□□□□ 0.71
PNKP-210ENST00000597965 SLC9A2Q9UBY0 812 aa19.46■□□□□ 0.71
PNKP-210ENST00000597965 CDY2AQ9Y6F7 541 aa19.46■□□□□ 0.71
PNKP-210ENST00000597965 FOSP01100 380 aaPredicted RBP19.45■□□□□ 0.7
PNKP-210ENST00000597965 STAG3L1P0CL83 205 aa19.45■□□□□ 0.7
PNKP-210ENST00000597965 HOXD11P31277 338 aaPredicted RBP19.45■□□□□ 0.7
PNKP-210ENST00000597965 PLPPR4Q7Z2D5 763 aa19.45■□□□□ 0.7
PNKP-210ENST00000597965 NME8Q8N427 588 aa19.45■□□□□ 0.7
PNKP-210ENST00000597965 P2RX5Q93086 422 aa19.45■□□□□ 0.7
PNKP-210ENST00000597965 C11orf16Q9NQ32 467 aa19.45■□□□□ 0.7
PNKP-210ENST00000597965 TRPC6Q9Y210 931 aa19.45■□□□□ 0.7
PNKP-210ENST00000597965 TELO2Q9Y4R8 837 aa19.45■□□□□ 0.7
PNKP-210ENST00000597965 SUPT16HQ9Y5B9 1047 aaKnown RBP19.45■□□□□ 0.7
PNKP-210ENST00000597965 TTC3P53804 2025 aa19.45■□□□□ 0.7
PNKP-210ENST00000597965 hCG_1984214I3L0E3 225 aa19.44■□□□□ 0.7
PNKP-210ENST00000597965 DCXO43602 365 aa19.44■□□□□ 0.7
PNKP-210ENST00000597965 DGKIO75912 1065 aa19.44■□□□□ 0.7
PNKP-210ENST00000597965 IGBP1P78318 339 aa19.44■□□□□ 0.7
PNKP-210ENST00000597965 MARCH8Q5T0T0 291 aa19.44■□□□□ 0.7
PNKP-210ENST00000597965 PPP1R18Q6NYC8 613 aa19.44■□□□□ 0.7
PNKP-210ENST00000597965 TMTC3Q6ZXV5 915 aa19.44■□□□□ 0.7
PNKP-210ENST00000597965 SGMS1Q86VZ5 419 aa19.44■□□□□ 0.7
PNKP-210ENST00000597965 ADHFE1Q8IWW8 467 aa19.44■□□□□ 0.7
PNKP-210ENST00000597965 CMTR2Q8IYT2 770 aaKnown RBP19.44■□□□□ 0.7
PNKP-210ENST00000597965 CMTR1Q8N1G2 835 aaKnown RBP19.44■□□□□ 0.7
PNKP-210ENST00000597965 ZNF713Q8N859 430 aaPredicted RBP19.44■□□□□ 0.7
PNKP-210ENST00000597965 ZNF689Q96CS4 500 aaPredicted RBP19.44■□□□□ 0.7
PNKP-210ENST00000597965 MXRA8Q9BRK3 442 aa19.44■□□□□ 0.7
PNKP-210ENST00000597965 RC3H2Q9HBD1 1191 aaKnown RBP19.44■□□□□ 0.7
PNKP-210ENST00000597965 KCNH7Q9NS40 1196 aa19.44■□□□□ 0.7
PNKP-210ENST00000597965 PCDHA2Q9Y5H9 948 aa19.44■□□□□ 0.7
PNKP-210ENST00000597965 NFASCO94856 1347 aa19.44■□□□□ 0.7
PNKP-210ENST00000597965 FAM86C2PA6NEL3 165 aa19.43■□□□□ 0.7
PNKP-210ENST00000597965 SLC27A2O14975 620 aa19.43■□□□□ 0.7
PNKP-210ENST00000597965 MMP1P03956 469 aa19.43■□□□□ 0.7
PNKP-210ENST00000597965 INSRRP14616 1297 aa19.43■□□□□ 0.7
PNKP-210ENST00000597965 UBE2SQ16763 222 aa19.43■□□□□ 0.7
PNKP-210ENST00000597965 CTC1Q2NKJ3 1217 aa19.43■□□□□ 0.7
PNKP-210ENST00000597965 ODR4Q5SWX8 454 aa19.43■□□□□ 0.7
PNKP-210ENST00000597965 NPAS4Q8IUM7 802 aa19.43■□□□□ 0.7
PNKP-210ENST00000597965 CCDC82Q8N4S0 544 aa19.43■□□□□ 0.7
PNKP-210ENST00000597965 PKD2L1Q9P0L9 805 aa19.43■□□□□ 0.7
PNKP-210ENST00000597965 TRPV2Q9Y5S1 764 aa19.43■□□□□ 0.7
PNKP-210ENST00000597965 RXRAP19793 462 aa19.42■□□□□ 0.7
PNKP-210ENST00000597965 STAT5BP51692 787 aa19.42■□□□□ 0.7
PNKP-210ENST00000597965 NAPAP54920 295 aa19.42■□□□□ 0.7
PNKP-210ENST00000597965 ZP2Q05996 745 aa19.42■□□□□ 0.7
PNKP-210ENST00000597965 PAK2Q13177 524 aa19.42■□□□□ 0.7
PNKP-210ENST00000597965 CREB3L3Q68CJ9 461 aa19.42■□□□□ 0.7
PNKP-210ENST00000597965 MICU3Q86XE3 530 aa19.42■□□□□ 0.7
PNKP-210ENST00000597965 LSG1Q9H089 658 aaKnown RBP19.42■□□□□ 0.7
PNKP-210ENST00000597965 FAM49AQ9H0Q0 323 aaPredicted RBP19.42■□□□□ 0.7
PNKP-210ENST00000597965 RIC8AQ9NPQ8 531 aa19.42■□□□□ 0.7
PNKP-210ENST00000597965 GRM6O15303 877 aa19.41■□□□□ 0.7
PNKP-210ENST00000597965 CD52P31358 61 aa19.41■□□□□ 0.7
PNKP-210ENST00000597965 ACTR2P61160 394 aa19.41■□□□□ 0.7
PNKP-210ENST00000597965 NECTIN1Q15223 517 aa19.41■□□□□ 0.7
PNKP-210ENST00000597965 SMAD2Q15796 467 aaKnown RBP19.41■□□□□ 0.7
PNKP-210ENST00000597965 CEP55Q53EZ4 464 aa19.41■□□□□ 0.7
PNKP-210ENST00000597965 ESYT1Q9BSJ8 1104 aa19.41■□□□□ 0.7
PNKP-210ENST00000597965 CELF4Q9BZC1 486 aaKnown RBP19.41■□□□□ 0.7
PNKP-210ENST00000597965 KCNH6Q9H252 994 aa19.41■□□□□ 0.7
PNKP-210ENST00000597965 ANO2Q9NQ90 1003 aa19.41■□□□□ 0.7
PNKP-210ENST00000597965 LRFN2Q9ULH4 789 aa19.41■□□□□ 0.7
PNKP-210ENST00000597965 IGSF9BQ9UPX0 1349 aa19.41■□□□□ 0.7
PNKP-210ENST00000597965 KDM3AQ9Y4C1 1321 aa19.41■□□□□ 0.7
PNKP-210ENST00000597965 SMIM35A0A1B0GVV1 85 aa19.4■□□□□ 0.7
PNKP-210ENST00000597965 POTEB3A0JP26 581 aa19.4■□□□□ 0.7
PNKP-210ENST00000597965 FSD2A1L4K1 749 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms