RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 PSMD14O00487 310 aa13.57□□□□□ -0.24
USHBP1-207ENST00000597928 ALAS1P13196 640 aa13.57□□□□□ -0.24
USHBP1-207ENST00000597928 PTK2Q05397 1052 aa13.57□□□□□ -0.24
USHBP1-207ENST00000597928 AOC3Q16853 763 aa13.57□□□□□ -0.24
USHBP1-207ENST00000597928 AMNQ9BXJ7 453 aa13.57□□□□□ -0.24
USHBP1-207ENST00000597928 CUEDC2Q9H467 287 aa13.57□□□□□ -0.24
USHBP1-207ENST00000597928 MED4Q9NPJ6 270 aa13.57□□□□□ -0.24
USHBP1-207ENST00000597928 KCND1Q9NSA2 647 aa13.57□□□□□ -0.24
USHBP1-207ENST00000597928 FRMD4BQ9Y2L6 1034 aa13.57□□□□□ -0.24
USHBP1-207ENST00000597928 CAPN7Q9Y6W3 813 aa13.57□□□□□ -0.24
USHBP1-207ENST00000597928 LAMA4Q16363 1823 aa13.57□□□□□ -0.24
USHBP1-207ENST00000597928 TUBGCP6Q96RT7 1819 aa13.57□□□□□ -0.24
USHBP1-207ENST00000597928 LRRC10BA6NIK2 292 aa13.57□□□□□ -0.24
USHBP1-207ENST00000597928 ERLIN2O94905 339 aa13.57□□□□□ -0.24
USHBP1-207ENST00000597928 H2AFZP0C0S5 128 aa13.57□□□□□ -0.24
USHBP1-207ENST00000597928 DLATP10515 647 aaKnown RBP13.57□□□□□ -0.24
USHBP1-207ENST00000597928 STAT1P42224 750 aa13.57□□□□□ -0.24
USHBP1-207ENST00000597928 ECE1P42892 770 aa13.57□□□□□ -0.24
USHBP1-207ENST00000597928 SETQ01105 290 aaPredicted RBP13.57□□□□□ -0.24
USHBP1-207ENST00000597928 IFT88Q13099 833 aa13.57□□□□□ -0.24
USHBP1-207ENST00000597928 COG2Q14746 738 aa13.57□□□□□ -0.24
USHBP1-207ENST00000597928 H2AFVQ71UI9 128 aa13.57□□□□□ -0.24
USHBP1-207ENST00000597928 CPLX4Q7Z7G2 160 aa13.57□□□□□ -0.24
USHBP1-207ENST00000597928 CEP57Q86XR8 500 aa13.57□□□□□ -0.24
USHBP1-207ENST00000597928 TSEN2Q8NCE0 465 aaKnown RBP13.57□□□□□ -0.24
USHBP1-207ENST00000597928 DYDC2Q96IM9 177 aa13.57□□□□□ -0.24
USHBP1-207ENST00000597928 MARF1Q9Y4F3 1742 aaKnown RBP13.57□□□□□ -0.24
USHBP1-207ENST00000597928 TAF1P21675 1872 aa13.56□□□□□ -0.24
USHBP1-207ENST00000597928 GPR75-ASB3A0A0A6YYF3 556 aa13.56□□□□□ -0.24
USHBP1-207ENST00000597928 PLTPP55058 493 aa13.56□□□□□ -0.24
USHBP1-207ENST00000597928 PAK2Q13177 524 aa13.56□□□□□ -0.24
USHBP1-207ENST00000597928 C2CD6Q53TS8 623 aa13.56□□□□□ -0.24
USHBP1-207ENST00000597928 DPH6Q7L8W6 267 aa13.56□□□□□ -0.24
USHBP1-207ENST00000597928 FBXO28Q9NVF7 368 aa13.56□□□□□ -0.24
USHBP1-207ENST00000597928 USTQ9Y2C2 406 aa13.56□□□□□ -0.24
USHBP1-207ENST00000597928 PPIP5K2O43314 1243 aa13.56□□□□□ -0.24
USHBP1-207ENST00000597928 SPOPO43791 374 aa13.56□□□□□ -0.24
USHBP1-207ENST00000597928 RPL13P26373 211 aaKnown RBP13.56□□□□□ -0.24
USHBP1-207ENST00000597928 LRRC31Q6UY01 552 aa13.56□□□□□ -0.24
USHBP1-207ENST00000597928 CATSPER3Q86XQ3 398 aa13.56□□□□□ -0.24
USHBP1-207ENST00000597928 FAM186BQ8IYM0 893 aa13.56□□□□□ -0.24
USHBP1-207ENST00000597928 PLAGL2Q9UPG8 496 aa13.56□□□□□ -0.24
USHBP1-207ENST00000597928 TMEM150BA6NC51 233 aa13.56□□□□□ -0.24
USHBP1-207ENST00000597928 ATMINO43313 823 aaPredicted RBP13.56□□□□□ -0.24
USHBP1-207ENST00000597928 AFPP02771 609 aaKnown RBP13.56□□□□□ -0.24
USHBP1-207ENST00000597928 SERPING1P05155 500 aa13.56□□□□□ -0.24
USHBP1-207ENST00000597928 TM4SF1P30408 202 aa13.56□□□□□ -0.24
USHBP1-207ENST00000597928 CDR1P51861 262 aa13.56□□□□□ -0.24
USHBP1-207ENST00000597928 WDR78Q5VTH9 848 aa13.56□□□□□ -0.24
USHBP1-207ENST00000597928 GBP6Q6ZN66 633 aa13.56□□□□□ -0.24
USHBP1-207ENST00000597928 USP20Q9Y2K6 914 aa13.56□□□□□ -0.24
USHBP1-207ENST00000597928 K7ENM7 598 aa13.55□□□□□ -0.24
USHBP1-207ENST00000597928 DAPK3O43293 454 aa13.55□□□□□ -0.24
USHBP1-207ENST00000597928 PPP1R11O60927 126 aaPredicted RBP13.55□□□□□ -0.24
USHBP1-207ENST00000597928 BBOX1O75936 387 aa13.55□□□□□ -0.24
USHBP1-207ENST00000597928 FLOT1O75955 427 aa13.55□□□□□ -0.24
USHBP1-207ENST00000597928 FGGP02679 453 aa13.55□□□□□ -0.24
USHBP1-207ENST00000597928 INPP5BP32019 993 aa13.55□□□□□ -0.24
USHBP1-207ENST00000597928 LRRC63Q05C16 580 aa13.55□□□□□ -0.24
USHBP1-207ENST00000597928 MSANTD4Q8NCY6 345 aa13.55□□□□□ -0.24
USHBP1-207ENST00000597928 FAM118BQ9BPY3 351 aa13.55□□□□□ -0.24
USHBP1-207ENST00000597928 FEZ2Q9UHY8 353 aaPredicted RBP13.55□□□□□ -0.24
USHBP1-207ENST00000597928 PLAAQ9Y263 795 aa13.55□□□□□ -0.24
USHBP1-207ENST00000597928 TESPA1A2RU30 521 aaPredicted RBP13.55□□□□□ -0.24
USHBP1-207ENST00000597928 CALUO43852 315 aaPredicted RBP13.55□□□□□ -0.24
USHBP1-207ENST00000597928 GCLMP48507 274 aa13.55□□□□□ -0.24
USHBP1-207ENST00000597928 PPFIA1Q13136 1202 aa13.55□□□□□ -0.24
USHBP1-207ENST00000597928 CCDC50Q8IVM0 306 aa13.55□□□□□ -0.24
USHBP1-207ENST00000597928 ELOA2Q8IYF1 753 aaPredicted RBP13.55□□□□□ -0.24
USHBP1-207ENST00000597928 OGFOD1Q8N543 542 aa13.55□□□□□ -0.24
USHBP1-207ENST00000597928 CERS5Q8N5B7 392 aa13.55□□□□□ -0.24
USHBP1-207ENST00000597928 ZIM3Q96PE6 472 aa13.55□□□□□ -0.24
USHBP1-207ENST00000597928 TRIM51Q9BSJ1 452 aa13.55□□□□□ -0.24
USHBP1-207ENST00000597928 DHX36Q9H2U1 1008 aaKnown RBP13.55□□□□□ -0.24
USHBP1-207ENST00000597928 ACP6Q9NPH0 428 aa13.55□□□□□ -0.24
USHBP1-207ENST00000597928 GGT7Q9UJ14 662 aa13.55□□□□□ -0.24
USHBP1-207ENST00000597928 TISP43B9A030 160 aa13.55□□□□□ -0.24
USHBP1-207ENST00000597928 C21orf2O43822 256 aa13.55□□□□□ -0.24
USHBP1-207ENST00000597928 NR3C1P04150 777 aa13.55□□□□□ -0.24
USHBP1-207ENST00000597928 TMOD1P28289 359 aa13.55□□□□□ -0.24
USHBP1-207ENST00000597928 RHBDL3P58872 404 aa13.55□□□□□ -0.24
USHBP1-207ENST00000597928 EPC2Q52LR7 807 aa13.55□□□□□ -0.24
USHBP1-207ENST00000597928 GPATCH4Q5T3I0 446 aaKnown RBP13.55□□□□□ -0.24
USHBP1-207ENST00000597928 CENPPQ6IPU0 288 aa13.55□□□□□ -0.24
USHBP1-207ENST00000597928 PPP1R18Q6NYC8 613 aa13.55□□□□□ -0.24
USHBP1-207ENST00000597928 OTUD6AQ7L8S5 288 aa13.55□□□□□ -0.24
USHBP1-207ENST00000597928 THOC1Q96FV9 657 aaKnown RBP13.55□□□□□ -0.24
USHBP1-207ENST00000597928 NOVA2Q9UNW9 492 aaKnown RBP13.55□□□□□ -0.24
USHBP1-207ENST00000597928 SNX24Q9Y343 169 aa13.55□□□□□ -0.24
USHBP1-207ENST00000597928 ATP6V0A2Q9Y487 856 aa13.55□□□□□ -0.24
USHBP1-207ENST00000597928 RAD51CO43502 376 aa13.54□□□□□ -0.24
USHBP1-207ENST00000597928 CALCAP01258 141 aa13.54□□□□□ -0.24
USHBP1-207ENST00000597928 GYS1P13807 737 aa13.54□□□□□ -0.24
USHBP1-207ENST00000597928 GTF2A1P52655 376 aaPredicted RBP13.54□□□□□ -0.24
USHBP1-207ENST00000597928 FBXW10Q5XX13 1052 aa13.54□□□□□ -0.24
USHBP1-207ENST00000597928 SCLT1Q96NL6 688 aa13.54□□□□□ -0.24
USHBP1-207ENST00000597928 QTRT2Q9H974 415 aaKnown RBP13.54□□□□□ -0.24
USHBP1-207ENST00000597928 KCNK9Q9NPC2 374 aa13.54□□□□□ -0.24
USHBP1-207ENST00000597928 UBE2TQ9NPD8 197 aaPredicted RBP13.54□□□□□ -0.24
USHBP1-207ENST00000597928 RIC8AQ9NPQ8 531 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms