RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 MBLAC1A4D2B0 266 aaPredicted RBP18.93■□□□□ 0.62
SHKBP1-215ENST00000597649 E7EWF7 191 aa18.93■□□□□ 0.62
SHKBP1-215ENST00000597649 PIK3CDO00329 1044 aa18.93■□□□□ 0.62
SHKBP1-215ENST00000597649 ITGB5P18084 799 aa18.93■□□□□ 0.62
SHKBP1-215ENST00000597649 PPFIA1Q13136 1202 aa18.93■□□□□ 0.62
SHKBP1-215ENST00000597649 GRIK4Q16099 956 aa18.93■□□□□ 0.62
SHKBP1-215ENST00000597649 HERC4Q5GLZ8 1057 aaPredicted RBP18.93■□□□□ 0.62
SHKBP1-215ENST00000597649 XRRA1Q6P2D8 792 aa18.93■□□□□ 0.62
SHKBP1-215ENST00000597649 RNF135Q8IUD6 432 aa18.93■□□□□ 0.62
SHKBP1-215ENST00000597649 SMARCC2Q8TAQ2 1214 aa18.93■□□□□ 0.62
SHKBP1-215ENST00000597649 KCNH6Q9H252 994 aa18.93■□□□□ 0.62
SHKBP1-215ENST00000597649 RWDD3Q9Y3V2 267 aa18.93■□□□□ 0.62
SHKBP1-215ENST00000597649 CDY2AQ9Y6F7 541 aa18.93■□□□□ 0.62
SHKBP1-215ENST00000597649 MRPL42Q9Y6G3 142 aaKnown RBP18.93■□□□□ 0.62
SHKBP1-215ENST00000597649 U3KPZ7 1027 aaPredicted RBP18.93■□□□□ 0.62
SHKBP1-215ENST00000597649 RALGAPA2Q2PPJ7 1873 aa18.92■□□□□ 0.62
SHKBP1-215ENST00000597649 MMP1P03956 469 aa18.92■□□□□ 0.62
SHKBP1-215ENST00000597649 GSPT1P15170 499 aaKnown RBP18.92■□□□□ 0.62
SHKBP1-215ENST00000597649 CD52P31358 61 aa18.92■□□□□ 0.62
SHKBP1-215ENST00000597649 SMAD4Q13485 552 aaKnown RBP18.92■□□□□ 0.62
SHKBP1-215ENST00000597649 CATIPQ7Z7H3 387 aa18.92■□□□□ 0.62
SHKBP1-215ENST00000597649 NLRX1Q86UT6 975 aa18.92■□□□□ 0.62
SHKBP1-215ENST00000597649 SPPL3Q8TCT6 385 aa18.92■□□□□ 0.62
SHKBP1-215ENST00000597649 SEPT1Q8WYJ6 367 aa18.92■□□□□ 0.62
SHKBP1-215ENST00000597649 MSLNLQ96KJ4 702 aa18.92■□□□□ 0.62
SHKBP1-215ENST00000597649 MYL10Q9BUA6 226 aa18.92■□□□□ 0.62
SHKBP1-215ENST00000597649 CD207Q9UJ71 328 aa18.92■□□□□ 0.62
SHKBP1-215ENST00000597649 TUBE1Q9UJT0 475 aa18.92■□□□□ 0.62
SHKBP1-215ENST00000597649 ZDBF2Q9HCK1 2354 aa18.92■□□□□ 0.62
SHKBP1-215ENST00000597649 ERICH2A1L162 156 aa18.91■□□□□ 0.62
SHKBP1-215ENST00000597649 STXBP3O00186 592 aa18.91■□□□□ 0.62
SHKBP1-215ENST00000597649 ITGB1P05556 798 aa18.91■□□□□ 0.62
SHKBP1-215ENST00000597649 TSHZ1Q6ZSZ6 1077 aa18.91■□□□□ 0.62
SHKBP1-215ENST00000597649 ADGRD2Q7Z7M1 963 aa18.91■□□□□ 0.62
SHKBP1-215ENST00000597649 GIMAP8Q8ND71 665 aaPredicted RBP18.91■□□□□ 0.62
SHKBP1-215ENST00000597649 PCYT2Q99447 389 aa18.91■□□□□ 0.62
SHKBP1-215ENST00000597649 PLVAPQ9BX97 442 aa18.91■□□□□ 0.62
SHKBP1-215ENST00000597649 SPZ1Q9BXG8 430 aa18.91■□□□□ 0.62
SHKBP1-215ENST00000597649 ERAP1Q9NZ08 941 aa18.91■□□□□ 0.62
SHKBP1-215ENST00000597649 CLEC1BQ9P126 229 aa18.91■□□□□ 0.62
SHKBP1-215ENST00000597649 KAT6AQ92794 2004 aa18.91■□□□□ 0.62
SHKBP1-215ENST00000597649 EYA4O95677 639 aa18.9■□□□□ 0.62
SHKBP1-215ENST00000597649 RSPH3Q86UC2 560 aa18.9■□□□□ 0.62
SHKBP1-215ENST00000597649 NCOA7Q8NI08 942 aa18.9■□□□□ 0.62
SHKBP1-215ENST00000597649 CUL5Q93034 780 aa18.9■□□□□ 0.62
SHKBP1-215ENST00000597649 GPRASP2Q96D09 838 aa18.9■□□□□ 0.62
SHKBP1-215ENST00000597649 PHOX2BQ99453 314 aa18.9■□□□□ 0.62
SHKBP1-215ENST00000597649 PKD2L1Q9P0L9 805 aa18.9■□□□□ 0.62
SHKBP1-215ENST00000597649 DMDP11532 3685 aa18.89■□□□□ 0.62
SHKBP1-215ENST00000597649 CFAP54Q96N23 3096 aa18.89■□□□□ 0.61
SHKBP1-215ENST00000597649 IGBP1P78318 339 aa18.89■□□□□ 0.61
SHKBP1-215ENST00000597649 MRPS6P82932 125 aaKnown RBP18.89■□□□□ 0.61
SHKBP1-215ENST00000597649 COL9A3Q14050 684 aaPredicted RBP18.89■□□□□ 0.61
SHKBP1-215ENST00000597649 BMP2KLQ5H9B9 411 aa18.89■□□□□ 0.61
SHKBP1-215ENST00000597649 RALYLQ86SE5 291 aaKnown RBP18.89■□□□□ 0.61
SHKBP1-215ENST00000597649 MB21D2Q8IYB1 491 aaPredicted RBP18.89■□□□□ 0.61
SHKBP1-215ENST00000597649 CMTR1Q8N1G2 835 aaKnown RBP18.89■□□□□ 0.61
SHKBP1-215ENST00000597649 SRBD1Q8N5C6 995 aaKnown RBP18.89■□□□□ 0.61
SHKBP1-215ENST00000597649 KLHL23Q8NBE8 558 aa18.89■□□□□ 0.61
SHKBP1-215ENST00000597649 EDAQ92838 391 aa18.89■□□□□ 0.61
SHKBP1-215ENST00000597649 GLG1Q92896 1179 aa18.89■□□□□ 0.61
SHKBP1-215ENST00000597649 P2RX5Q93086 422 aa18.89■□□□□ 0.61
SHKBP1-215ENST00000597649 RRP36Q96EU6 259 aaKnown RBP18.89■□□□□ 0.61
SHKBP1-215ENST00000597649 MFSD14AQ96MC6 490 aa18.89■□□□□ 0.61
SHKBP1-215ENST00000597649 MAP3K14Q99558 947 aa18.89■□□□□ 0.61
SHKBP1-215ENST00000597649 POP1Q99575 1024 aaKnown RBP18.89■□□□□ 0.61
SHKBP1-215ENST00000597649 FAM49AQ9H0Q0 323 aaPredicted RBP18.89■□□□□ 0.61
SHKBP1-215ENST00000597649 LY9Q9HBG7 655 aa18.89■□□□□ 0.61
SHKBP1-215ENST00000597649 UBIAD1Q9Y5Z9 338 aa18.89■□□□□ 0.61
SHKBP1-215ENST00000597649 PLEKHA8P1O95397 391 aa18.88■□□□□ 0.61
SHKBP1-215ENST00000597649 INSRRP14616 1297 aa18.88■□□□□ 0.61
SHKBP1-215ENST00000597649 CHMLP26374 656 aa18.88■□□□□ 0.61
SHKBP1-215ENST00000597649 GATMP50440 423 aa18.88■□□□□ 0.61
SHKBP1-215ENST00000597649 TMEM62Q0P6H9 643 aa18.88■□□□□ 0.61
SHKBP1-215ENST00000597649 SART3Q15020 963 aaKnown RBP18.88■□□□□ 0.61
SHKBP1-215ENST00000597649 PAN2Q504Q3 1202 aaKnown RBP18.88■□□□□ 0.61
SHKBP1-215ENST00000597649 IER5LQ5T953 404 aa18.88■□□□□ 0.61
SHKBP1-215ENST00000597649 CMTR2Q8IYT2 770 aaKnown RBP18.88■□□□□ 0.61
SHKBP1-215ENST00000597649 ZNF654Q8IZM8 581 aa18.88■□□□□ 0.61
SHKBP1-215ENST00000597649 SMARCAD1Q9H4L7 1026 aa18.88■□□□□ 0.61
SHKBP1-215ENST00000597649 PCDHGC5Q9Y5F6 944 aa18.88■□□□□ 0.61
SHKBP1-215ENST00000597649 ZFHX2Q9C0A1 2572 aaPredicted RBP18.88■□□□□ 0.61
SHKBP1-215ENST00000597649 CACNA1HO95180 2353 aa18.88■□□□□ 0.61
SHKBP1-215ENST00000597649 MYO15AQ9UKN7 3530 aa18.87■□□□□ 0.61
SHKBP1-215ENST00000597649 SMARCA1P28370 1054 aa18.87■□□□□ 0.61
SHKBP1-215ENST00000597649 NDUFV1P49821 464 aa18.87■□□□□ 0.61
SHKBP1-215ENST00000597649 UBE2SQ16763 222 aa18.87■□□□□ 0.61
SHKBP1-215ENST00000597649 NAALADL2Q58DX5 795 aa18.87■□□□□ 0.61
SHKBP1-215ENST00000597649 EFHBQ8N7U6 833 aa18.87■□□□□ 0.61
SHKBP1-215ENST00000597649 POF1BQ8WVV4 589 aa18.87■□□□□ 0.61
SHKBP1-215ENST00000597649 CDHR1Q96JP9 859 aa18.87■□□□□ 0.61
SHKBP1-215ENST00000597649 TMX1Q9H3N1 280 aa18.87■□□□□ 0.61
SHKBP1-215ENST00000597649 PSTPIP2Q9H939 334 aa18.87■□□□□ 0.61
SHKBP1-215ENST00000597649 PADI3Q9ULW8 664 aa18.87■□□□□ 0.61
SHKBP1-215ENST00000597649 hCG_1642624A0A1W2PR95 340 aa18.86■□□□□ 0.61
SHKBP1-215ENST00000597649 RRN3P2A6NIE6 340 aa18.86■□□□□ 0.61
SHKBP1-215ENST00000597649 LOC730098B7Z3J9 87 aa18.86■□□□□ 0.61
SHKBP1-215ENST00000597649 GLP2RO95838 553 aa18.86■□□□□ 0.61
SHKBP1-215ENST00000597649 NRIP1P48552 1158 aa18.86■□□□□ 0.61
SHKBP1-215ENST00000597649 MTMR1Q13613 665 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms