RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 C10orf76Q5T2E6 689 aa19.02■□□□□ 0.63
ARHGEF1-213ENST00000595897 EIF1ADQ8N9N8 165 aaKnown RBP19.02■□□□□ 0.63
ARHGEF1-213ENST00000595897 ACTRT1Q8TDG2 376 aa19.02■□□□□ 0.63
ARHGEF1-213ENST00000595897 SCFD2Q8WU76 684 aa19.02■□□□□ 0.63
ARHGEF1-213ENST00000595897 SCFD1Q8WVM8 642 aa19.02■□□□□ 0.63
ARHGEF1-213ENST00000595897 AMACRQ9UHK6 382 aa19.02■□□□□ 0.63
ARHGEF1-213ENST00000595897 KCNQ2O43526 872 aa19.01■□□□□ 0.63
ARHGEF1-213ENST00000595897 PLA2G4BP0C869 781 aa19.01■□□□□ 0.63
ARHGEF1-213ENST00000595897 SLC9A1P19634 815 aa19.01■□□□□ 0.63
ARHGEF1-213ENST00000595897 BIRC3Q13489 604 aa19.01■□□□□ 0.63
ARHGEF1-213ENST00000595897 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.01■□□□□ 0.635e-7■■■■□ 23.1
ARHGEF1-213ENST00000595897 KLC4Q9NSK0 619 aa19.01■□□□□ 0.63
ARHGEF1-213ENST00000595897 HDAC9Q9UKV0 1011 aa19.01■□□□□ 0.63
ARHGEF1-213ENST00000595897 BACH1O14867 736 aa19.01■□□□□ 0.63
ARHGEF1-213ENST00000595897 DAPK3O43293 454 aa19.01■□□□□ 0.63
ARHGEF1-213ENST00000595897 TPTE2Q6XPS3 522 aa19.01■□□□□ 0.63
ARHGEF1-213ENST00000595897 METTL13Q8N6R0 699 aa19.01■□□□□ 0.63
ARHGEF1-213ENST00000595897 HAS1Q92839 578 aa19.01■□□□□ 0.63
ARHGEF1-213ENST00000595897 GPR101Q96P66 508 aaPredicted RBP19.01■□□□□ 0.63
ARHGEF1-213ENST00000595897 NEUROG2Q9H2A3 272 aa19.01■□□□□ 0.63
ARHGEF1-213ENST00000595897 NAGPAQ9UK23 515 aa19.01■□□□□ 0.63
ARHGEF1-213ENST00000595897 NOVA2Q9UNW9 492 aaKnown RBP19.01■□□□□ 0.63
ARHGEF1-213ENST00000595897 DOT1LQ8TEK3 1739 aa19.01■□□□□ 0.63
ARHGEF1-213ENST00000595897 ZNF335Q9H4Z2 1342 aaPredicted RBP19■□□□□ 0.63
ARHGEF1-213ENST00000595897 KDM3AQ9Y4C1 1321 aa19■□□□□ 0.63
ARHGEF1-213ENST00000595897 FLOT1O75955 427 aa19■□□□□ 0.63
ARHGEF1-213ENST00000595897 UCHL3P15374 230 aa19■□□□□ 0.63
ARHGEF1-213ENST00000595897 MARSP56192 900 aaKnown RBP19■□□□□ 0.63
ARHGEF1-213ENST00000595897 MTMR3Q13615 1198 aa19■□□□□ 0.63
ARHGEF1-213ENST00000595897 LINC00116Q8NCU8 138 aa19■□□□□ 0.63
ARHGEF1-213ENST00000595897 CALR3Q96L12 384 aaKnown RBP19■□□□□ 0.63
ARHGEF1-213ENST00000595897 RTFDC1Q9BY42 306 aaPredicted RBP19■□□□□ 0.63
ARHGEF1-213ENST00000595897 CD248Q9HCU0 757 aa19■□□□□ 0.63
ARHGEF1-213ENST00000595897 BZW2Q9Y6E2 419 aaKnown RBP19■□□□□ 0.63
ARHGEF1-213ENST00000595897 SNED1Q8TER0 1413 aa19■□□□□ 0.63
ARHGEF1-213ENST00000595897 SRRM3A6NNA2 597 aaPredicted RBP19■□□□□ 0.63
ARHGEF1-213ENST00000595897 H0YGN5 161 aa19■□□□□ 0.63
ARHGEF1-213ENST00000595897 SMTNP53814 917 aa19■□□□□ 0.63
ARHGEF1-213ENST00000595897 DCAF17Q5H9S7 520 aaPredicted RBP19■□□□□ 0.63
ARHGEF1-213ENST00000595897 TCERG1LQ5VWI1 586 aa19■□□□□ 0.63
ARHGEF1-213ENST00000595897 IRF2BP2Q7Z5L9 587 aa19■□□□□ 0.63
ARHGEF1-213ENST00000595897 SLC51AQ86UW1 340 aa19■□□□□ 0.63
ARHGEF1-213ENST00000595897 CDCA7Q9BWT1 371 aaPredicted RBP19■□□□□ 0.63
ARHGEF1-213ENST00000595897 ARMCX3Q9UH62 379 aaPredicted RBP19■□□□□ 0.63
ARHGEF1-213ENST00000595897 DDX20Q9UHI6 824 aaKnown RBP19■□□□□ 0.63
ARHGEF1-213ENST00000595897 GGA2Q9UJY4 613 aa19■□□□□ 0.63
ARHGEF1-213ENST00000595897 NFS1Q9Y697 457 aa19■□□□□ 0.63
ARHGEF1-213ENST00000595897 POTEB3A0JP26 581 aa18.99■□□□□ 0.63
ARHGEF1-213ENST00000595897 BTNL10A8MVZ5 291 aa18.99■□□□□ 0.63
ARHGEF1-213ENST00000595897 POTECB2RU33 542 aa18.99■□□□□ 0.63
ARHGEF1-213ENST00000595897 FLT3P36888 993 aa18.99■□□□□ 0.63
ARHGEF1-213ENST00000595897 IFFO1Q0D2I5 559 aa18.99■□□□□ 0.63
ARHGEF1-213ENST00000595897 EXOC3L4Q17RC7 722 aa18.99■□□□□ 0.63
ARHGEF1-213ENST00000595897 KRT71Q3SY84 523 aa18.99■□□□□ 0.63
ARHGEF1-213ENST00000595897 POTEBQ6S5H4 581 aa18.99■□□□□ 0.63
ARHGEF1-213ENST00000595897 ZNF804AQ7Z570 1209 aa18.99■□□□□ 0.63
ARHGEF1-213ENST00000595897 VPS36Q86VN1 386 aa18.99■□□□□ 0.63
ARHGEF1-213ENST00000595897 KCTD10Q9H3F6 313 aa18.99■□□□□ 0.63
ARHGEF1-213ENST00000595897 SRP68Q9UHB9 627 aaKnown RBP18.99■□□□□ 0.63
ARHGEF1-213ENST00000595897 SLC12A6Q9UHW9 1150 aa18.99■□□□□ 0.63
ARHGEF1-213ENST00000595897 TRAPPC3O43617 180 aa18.99■□□□□ 0.63
ARHGEF1-213ENST00000595897 ITGA4P13612 1032 aa18.99■□□□□ 0.63
ARHGEF1-213ENST00000595897 PPP2R2AP63151 447 aa18.99■□□□□ 0.63
ARHGEF1-213ENST00000595897 DDR1Q08345 913 aa18.99■□□□□ 0.63
ARHGEF1-213ENST00000595897 DAAM2Q86T65 1068 aa18.99■□□□□ 0.63
ARHGEF1-213ENST00000595897 CCDC26Q8TAB7 109 aa18.99■□□□□ 0.63
ARHGEF1-213ENST00000595897 LMBR1Q8WVP7 490 aa18.99■□□□□ 0.63
ARHGEF1-213ENST00000595897 CHUKO15111 745 aa18.99■□□□□ 0.63
ARHGEF1-213ENST00000595897 PLCB4Q15147 1175 aa18.99■□□□□ 0.63
ARHGEF1-213ENST00000595897 LRRC57Q8N9N7 239 aa18.99■□□□□ 0.63
ARHGEF1-213ENST00000595897 CUL5Q93034 780 aa18.99■□□□□ 0.63
ARHGEF1-213ENST00000595897 TRIM31Q9BZY9 425 aa18.99■□□□□ 0.63
ARHGEF1-213ENST00000595897 DPH5Q9H2P9 285 aa18.99■□□□□ 0.63
ARHGEF1-213ENST00000595897 CCDC188H7C350 402 aa18.98■□□□□ 0.63
ARHGEF1-213ENST00000595897 ATP2C2O75185 946 aa18.98■□□□□ 0.63
ARHGEF1-213ENST00000595897 MAGOHP61326 146 aaKnown RBP18.98■□□□□ 0.63
ARHGEF1-213ENST00000595897 DHX9Q08211 1270 aaKnown RBP18.98■□□□□ 0.63
ARHGEF1-213ENST00000595897 DRP2Q13474 957 aa18.98■□□□□ 0.63
ARHGEF1-213ENST00000595897 ASPRV1Q53RT3 343 aa18.98■□□□□ 0.63
ARHGEF1-213ENST00000595897 C6orf89Q6UWU4 347 aa18.98■□□□□ 0.63
ARHGEF1-213ENST00000595897 TPCN2Q8NHX9 752 aa18.98■□□□□ 0.63
ARHGEF1-213ENST00000595897 MAGOHBQ96A72 148 aaKnown RBP18.98■□□□□ 0.63
ARHGEF1-213ENST00000595897 SLC40A1Q9NP59 571 aa18.98■□□□□ 0.63
ARHGEF1-213ENST00000595897 PCDHA2Q9Y5H9 948 aa18.98■□□□□ 0.63
ARHGEF1-213ENST00000595897 CCDC88AQ3V6T2 1871 aa18.98■□□□□ 0.63
ARHGEF1-213ENST00000595897 TTI1O43156 1089 aa18.98■□□□□ 0.63
ARHGEF1-213ENST00000595897 MRPL12P52815 198 aaKnown RBP18.98■□□□□ 0.63
ARHGEF1-213ENST00000595897 GSCP56915 257 aaPredicted RBP18.98■□□□□ 0.63
ARHGEF1-213ENST00000595897 CPLX4Q7Z7G2 160 aa18.98■□□□□ 0.63
ARHGEF1-213ENST00000595897 UTP11Q9Y3A2 253 aaKnown RBP18.98■□□□□ 0.63
ARHGEF1-213ENST00000595897 AFPP02771 609 aaKnown RBP18.97■□□□□ 0.63
ARHGEF1-213ENST00000595897 XRCC5P13010 732 aaKnown RBP18.97■□□□□ 0.63
ARHGEF1-213ENST00000595897 QPCTQ16769 361 aa18.97■□□□□ 0.63
ARHGEF1-213ENST00000595897 EDRF1Q3B7T1 1238 aa18.97■□□□□ 0.63
ARHGEF1-213ENST00000595897 PPP4R3CPQ6ZMV5 832 aa18.97■□□□□ 0.63
ARHGEF1-213ENST00000595897 CLEC10AQ8IUN9 316 aa18.97■□□□□ 0.63
ARHGEF1-213ENST00000595897 CACNA2D3Q8IZS8 1091 aa18.97■□□□□ 0.63
ARHGEF1-213ENST00000595897 ACTR5Q9H9F9 607 aaPredicted RBP18.97■□□□□ 0.63
ARHGEF1-213ENST00000595897 H2AFZP0C0S5 128 aa18.97■□□□□ 0.63
ARHGEF1-213ENST00000595897 CYP11B2P19099 503 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms