RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 TIMP1P01033 207 aa15.57■□□□□ 0.08
SHKBP1-207ENST00000595631 U2AF2P26368 475 aaKnown RBP eCLIP15.57■□□□□ 0.08
SHKBP1-207ENST00000595631 MCM7P33993 719 aa15.57■□□□□ 0.08
SHKBP1-207ENST00000595631 STAT5BP51692 787 aa15.57■□□□□ 0.08
SHKBP1-207ENST00000595631 PLCB4Q15147 1175 aa15.57■□□□□ 0.08
SHKBP1-207ENST00000595631 LARP1BQ659C4 914 aaKnown RBP15.57■□□□□ 0.08
SHKBP1-207ENST00000595631 SWSAP1Q6NVH7 229 aa15.57■□□□□ 0.08
SHKBP1-207ENST00000595631 MIS18BP1Q6P0N0 1132 aa15.57■□□□□ 0.08
SHKBP1-207ENST00000595631 LMBR1Q8WVP7 490 aa15.57■□□□□ 0.08
SHKBP1-207ENST00000595631 ZBTB10Q96DT7 871 aa15.57■□□□□ 0.08
SHKBP1-207ENST00000595631 NAP1L4Q99733 375 aaKnown RBP15.57■□□□□ 0.08
SHKBP1-207ENST00000595631 LBHD1Q9BQE6 289 aaPredicted RBP15.57■□□□□ 0.08
SHKBP1-207ENST00000595631 WNT8AQ9H1J5 351 aa15.57■□□□□ 0.08
SHKBP1-207ENST00000595631 TMEM60Q9H2L4 133 aa15.57■□□□□ 0.08
SHKBP1-207ENST00000595631 AZI2Q9H6S1 392 aa15.57■□□□□ 0.08
SHKBP1-207ENST00000595631 ZNF302Q9NR11 478 aa15.57■□□□□ 0.08
SHKBP1-207ENST00000595631 TCEAL9Q9UHQ7 104 aa15.57■□□□□ 0.08
SHKBP1-207ENST00000595631 VAV3Q9UKW4 847 aa15.57■□□□□ 0.08
SHKBP1-207ENST00000595631 NOD1Q9Y239 953 aa15.57■□□□□ 0.08
SHKBP1-207ENST00000595631 SAMM50Q9Y512 469 aa15.57■□□□□ 0.08
SHKBP1-207ENST00000595631 C17orf102A2RUQ5 167 aa15.56■□□□□ 0.08
SHKBP1-207ENST00000595631 WDR64B1ANS9 1081 aa15.56■□□□□ 0.08
SHKBP1-207ENST00000595631 EML1O00423 815 aa15.56■□□□□ 0.08
SHKBP1-207ENST00000595631 TREHO43280 583 aa15.56■□□□□ 0.08
SHKBP1-207ENST00000595631 ATP4AP20648 1035 aa15.56■□□□□ 0.08
SHKBP1-207ENST00000595631 HOXC8P31273 242 aa15.56■□□□□ 0.08
SHKBP1-207ENST00000595631 TOB1P50616 345 aaPredicted RBP15.56■□□□□ 0.08
SHKBP1-207ENST00000595631 EPHB4P54760 987 aa15.56■□□□□ 0.08
SHKBP1-207ENST00000595631 CCL23P55773 120 aa15.56■□□□□ 0.08
SHKBP1-207ENST00000595631 IGBP1P78318 339 aa15.56■□□□□ 0.08
SHKBP1-207ENST00000595631 ZNF174Q15697 407 aa15.56■□□□□ 0.08
SHKBP1-207ENST00000595631 UGCGQ16739 394 aa15.56■□□□□ 0.08
SHKBP1-207ENST00000595631 B3GNT9Q6UX72 402 aa15.56■□□□□ 0.08
SHKBP1-207ENST00000595631 TRMT1LQ7Z2T5 733 aaKnown RBP15.56■□□□□ 0.08
SHKBP1-207ENST00000595631 MIER3Q7Z3K6 550 aa15.56■□□□□ 0.08
SHKBP1-207ENST00000595631 SMAP1Q8IYB5 467 aaPredicted RBP15.56■□□□□ 0.08
SHKBP1-207ENST00000595631 TRAPPC12Q8WVT3 735 aa15.56■□□□□ 0.08
SHKBP1-207ENST00000595631 PRO3102Q9H379 93 aa15.56■□□□□ 0.08
SHKBP1-207ENST00000595631 DISC1Q9NRI5 854 aa15.56■□□□□ 0.08
SHKBP1-207ENST00000595631 GABBR1Q9UBS5 961 aa15.56■□□□□ 0.08
SHKBP1-207ENST00000595631 TRPC6Q9Y210 931 aa15.56■□□□□ 0.08
SHKBP1-207ENST00000595631 PCDHA10Q9Y5I2 948 aa15.56■□□□□ 0.08
SHKBP1-207ENST00000595631 GBF1Q92538 1859 aa15.55■□□□□ 0.08
SHKBP1-207ENST00000595631 IGSF9BQ9UPX0 1349 aa15.55■□□□□ 0.08
SHKBP1-207ENST00000595631 MARCH6O60337 910 aa15.55■□□□□ 0.08
SHKBP1-207ENST00000595631 NEMFO60524 1076 aa15.55■□□□□ 0.08
SHKBP1-207ENST00000595631 PSAPP07602 524 aa15.55■□□□□ 0.08
SHKBP1-207ENST00000595631 PPFIA1Q13136 1202 aa15.55■□□□□ 0.08
SHKBP1-207ENST00000595631 GRIK4Q16099 956 aa15.55■□□□□ 0.08
SHKBP1-207ENST00000595631 CALCRLQ16602 461 aa15.55■□□□□ 0.08
SHKBP1-207ENST00000595631 TTC38Q5R3I4 469 aa15.55■□□□□ 0.08
SHKBP1-207ENST00000595631 FAM160B1Q5W0V3 765 aa15.55■□□□□ 0.08
SHKBP1-207ENST00000595631 PDXDC2PQ6P474 469 aa15.55■□□□□ 0.08
SHKBP1-207ENST00000595631 PLPPR4Q7Z2D5 763 aa15.55■□□□□ 0.08
SHKBP1-207ENST00000595631 AFAP1L1Q8TED9 768 aa15.55■□□□□ 0.08
SHKBP1-207ENST00000595631 ATP6V0A1Q93050 837 aa15.55■□□□□ 0.08
SHKBP1-207ENST00000595631 INTS4Q96HW7 963 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-207ENST00000595631 SCLYQ96I15 445 aa15.55■□□□□ 0.08
SHKBP1-207ENST00000595631 FAM20AQ96MK3 541 aa15.55■□□□□ 0.08
SHKBP1-207ENST00000595631 UBE2OQ9C0C9 1292 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-207ENST00000595631 PTPRSQ13332 1948 aa15.55■□□□□ 0.08
SHKBP1-207ENST00000595631 VPS37CA5D8V6 355 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-207ENST00000595631 TBX3O15119 743 aa15.54■□□□□ 0.08
SHKBP1-207ENST00000595631 INSRRP14616 1297 aa15.54■□□□□ 0.08
SHKBP1-207ENST00000595631 CSF2RAP15509 400 aa15.54■□□□□ 0.08
SHKBP1-207ENST00000595631 JAK3P52333 1124 aa15.54■□□□□ 0.08
SHKBP1-207ENST00000595631 ADAM17P78536 824 aa15.54■□□□□ 0.08
SHKBP1-207ENST00000595631 PPP2R5CQ13362 524 aa15.54■□□□□ 0.08
SHKBP1-207ENST00000595631 TRIM71Q2Q1W2 868 aaKnown RBP15.54■□□□□ 0.08
SHKBP1-207ENST00000595631 MFSD5Q6N075 450 aa15.54■□□□□ 0.08
SHKBP1-207ENST00000595631 SPRYD3Q8NCJ5 442 aa15.54■□□□□ 0.08
SHKBP1-207ENST00000595631 MTMR9Q96QG7 549 aa15.54■□□□□ 0.08
SHKBP1-207ENST00000595631 NOL7Q9UMY1 257 aaKnown RBP15.54■□□□□ 0.08
SHKBP1-207ENST00000595631 PCDHB6Q9Y5E3 794 aa15.54■□□□□ 0.08
SHKBP1-207ENST00000595631 MAFBQ9Y5Q3 323 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-207ENST00000595631 NRCAMQ92823 1304 aa15.53■□□□□ 0.08
SHKBP1-207ENST00000595631 POTEB3A0JP26 581 aa15.53■□□□□ 0.08
SHKBP1-207ENST00000595631 ZNF862O60290 1169 aa15.53■□□□□ 0.08
SHKBP1-207ENST00000595631 ACRP10323 421 aa15.53■□□□□ 0.08
SHKBP1-207ENST00000595631 SFNP31947 248 aa15.53■□□□□ 0.08
SHKBP1-207ENST00000595631 TXKP42681 527 aa15.53■□□□□ 0.08
SHKBP1-207ENST00000595631 FPGSQ05932 587 aa15.53■□□□□ 0.08
SHKBP1-207ENST00000595631 SPIRE1Q08AE8 756 aa15.53■□□□□ 0.08
SHKBP1-207ENST00000595631 PTK7Q13308 1070 aa15.53■□□□□ 0.08
SHKBP1-207ENST00000595631 MARCH8Q5T0T0 291 aa15.53■□□□□ 0.08
SHKBP1-207ENST00000595631 NCAPH2Q6IBW4 605 aa15.53■□□□□ 0.08
SHKBP1-207ENST00000595631 POTEBQ6S5H4 581 aa15.53■□□□□ 0.08
SHKBP1-207ENST00000595631 RUFY4Q6ZNE9 571 aa15.53■□□□□ 0.08
SHKBP1-207ENST00000595631 FERMT3Q86UX7 667 aa15.53■□□□□ 0.08
SHKBP1-207ENST00000595631 SERINC5Q86VE9 423 aa15.53■□□□□ 0.08
SHKBP1-207ENST00000595631 CKAP2LQ8IYA6 745 aa15.53■□□□□ 0.08
SHKBP1-207ENST00000595631 BANK1Q8NDB2 785 aa15.53■□□□□ 0.08
SHKBP1-207ENST00000595631 ATP8B4Q8TF62 1192 aa15.53■□□□□ 0.08
SHKBP1-207ENST00000595631 TMEM150BA6NC51 233 aa15.52■□□□□ 0.08
SHKBP1-207ENST00000595631 BAG4O95429 457 aaKnown RBP15.52■□□□□ 0.08
SHKBP1-207ENST00000595631 CKBP12277 381 aa15.52■□□□□ 0.08
SHKBP1-207ENST00000595631 SYT1P21579 422 aa15.52■□□□□ 0.08
SHKBP1-207ENST00000595631 BMP8BP34820 402 aa15.52■□□□□ 0.08
SHKBP1-207ENST00000595631 PRKCEQ02156 737 aa15.52■□□□□ 0.08
SHKBP1-207ENST00000595631 C9orf50Q5SZB4 431 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms