RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 WRAP73Q9P2S5 460 aaPredicted RBP14.73□□□□□ -0.05
VRK3-205ENST00000593919 ZNF236Q9UL36 1845 aa14.73□□□□□ -0.05
VRK3-205ENST00000593919 COBLO75128 1261 aa14.73□□□□□ -0.05
VRK3-205ENST00000593919 SLC12A3P55017 1021 aa14.73□□□□□ -0.05
VRK3-205ENST00000593919 SP2Q02086 613 aa14.73□□□□□ -0.05
VRK3-205ENST00000593919 KCNB1Q14721 858 aa14.73□□□□□ -0.05
VRK3-205ENST00000593919 NEK9Q8TD19 979 aa14.73□□□□□ -0.05
VRK3-205ENST00000593919 CACTINQ8WUQ7 758 aaKnown RBP14.73□□□□□ -0.05
VRK3-205ENST00000593919 TCEAL9Q9UHQ7 104 aa14.73□□□□□ -0.05
VRK3-205ENST00000593919 NFASCO94856 1347 aa14.72□□□□□ -0.05
VRK3-205ENST00000593919 WDR64B1ANS9 1081 aa14.72□□□□□ -0.05
VRK3-205ENST00000593919 TLR2O60603 784 aa14.72□□□□□ -0.05
VRK3-205ENST00000593919 RHOBTB3O94955 611 aa14.72□□□□□ -0.05
VRK3-205ENST00000593919 MUTP22033 750 aa14.72□□□□□ -0.05
VRK3-205ENST00000593919 MAPK4P31152 587 aa14.72□□□□□ -0.05
VRK3-205ENST00000593919 VASPP50552 380 aaPredicted RBP14.72□□□□□ -0.05
VRK3-205ENST00000593919 GRB14Q14449 540 aa14.72□□□□□ -0.05
VRK3-205ENST00000593919 ARID5BQ14865 1188 aa14.72□□□□□ -0.05
VRK3-205ENST00000593919 NCAPHQ15003 741 aa14.72□□□□□ -0.05
VRK3-205ENST00000593919 ZNF746Q6NUN9 644 aaPredicted RBP14.72□□□□□ -0.05
VRK3-205ENST00000593919 CNNM4Q6P4Q7 775 aa14.72□□□□□ -0.05
VRK3-205ENST00000593919 FILIP1Q7Z7B0 1213 aa14.72□□□□□ -0.05
VRK3-205ENST00000593919 GPBP1Q86WP2 473 aa14.72□□□□□ -0.05
VRK3-205ENST00000593919 KCTD17Q8N5Z5 321 aa14.72□□□□□ -0.05
VRK3-205ENST00000593919 ZNF784Q8NCA9 323 aaPredicted RBP14.72□□□□□ -0.05
VRK3-205ENST00000593919 PIGOQ8TEQ8 1089 aa14.72□□□□□ -0.05
VRK3-205ENST00000593919 LRRC27Q9C0I9 530 aa14.72□□□□□ -0.05
VRK3-205ENST00000593919 JPH1Q9HDC5 661 aaPredicted RBP14.72□□□□□ -0.05
VRK3-205ENST00000593919 IFNKQ9P0W0 207 aa14.72□□□□□ -0.05
VRK3-205ENST00000593919 MGAMO43451 1857 aa14.71□□□□□ -0.05
VRK3-205ENST00000593919 SORBS3O60504 671 aa14.71□□□□□ -0.05
VRK3-205ENST00000593919 P4HBP07237 508 aaKnown RBP14.71□□□□□ -0.05
VRK3-205ENST00000593919 CD44P16070 742 aaKnown RBP14.71□□□□□ -0.05
VRK3-205ENST00000593919 CYP11B2P19099 503 aa14.71□□□□□ -0.05
VRK3-205ENST00000593919 SFNP31947 248 aa14.71□□□□□ -0.05
VRK3-205ENST00000593919 JAK3P52333 1124 aa14.71□□□□□ -0.05
VRK3-205ENST00000593919 TERF1P54274 439 aa14.71□□□□□ -0.05
VRK3-205ENST00000593919 ZNF792Q3KQV3 632 aa14.71□□□□□ -0.05
VRK3-205ENST00000593919 ZNF658Q5TYW1 1059 aaPredicted RBP14.71□□□□□ -0.05
VRK3-205ENST00000593919 SYT2Q8N9I0 419 aaPredicted RBP14.71□□□□□ -0.05
VRK3-205ENST00000593919 MORC4Q8TE76 937 aa14.71□□□□□ -0.05
VRK3-205ENST00000593919 SENP7Q9BQF6 1050 aa14.71□□□□□ -0.05
VRK3-205ENST00000593919 BHMT2Q9H2M3 363 aa14.71□□□□□ -0.05
VRK3-205ENST00000593919 SLC9A2Q9UBY0 812 aa14.71□□□□□ -0.05
VRK3-205ENST00000593919 DACH1Q9UI36 760 aa14.71□□□□□ -0.05
VRK3-205ENST00000593919 GDAQ9Y2T3 454 aa14.71□□□□□ -0.05
VRK3-205ENST00000593919 UQCRHLA0A096LP55 91 aa14.71□□□□□ -0.06
VRK3-205ENST00000593919 LOC102724159A0A0B4J2E5 919 aa14.71□□□□□ -0.06
VRK3-205ENST00000593919 IKBKBO14920 756 aa14.71□□□□□ -0.06
VRK3-205ENST00000593919 ZBTB39O15060 712 aa14.71□□□□□ -0.06
VRK3-205ENST00000593919 EYA4O95677 639 aa14.71□□□□□ -0.06
VRK3-205ENST00000593919 UQCRHP07919 91 aa14.71□□□□□ -0.06
VRK3-205ENST00000593919 YY1P25490 414 aa14.71□□□□□ -0.06
VRK3-205ENST00000593919 TM4SF4P48230 202 aa14.71□□□□□ -0.06
VRK3-205ENST00000593919 SP4Q02446 784 aa14.71□□□□□ -0.06
VRK3-205ENST00000593919 CRHR2Q13324 411 aa14.71□□□□□ -0.06
VRK3-205ENST00000593919 PWP2Q15269 919 aaKnown RBP14.71□□□□□ -0.06
VRK3-205ENST00000593919 C17orf99Q6UX52 265 aa14.71□□□□□ -0.06
VRK3-205ENST00000593919 PLEKHH3Q7Z736 793 aa14.71□□□□□ -0.06
VRK3-205ENST00000593919 FBXO16Q8IX29 292 aaPredicted RBP14.71□□□□□ -0.06
VRK3-205ENST00000593919 DNAJC19Q96DA6 116 aa14.71□□□□□ -0.06
VRK3-205ENST00000593919 XPO4Q9C0E2 1151 aaKnown RBP14.71□□□□□ -0.06
VRK3-205ENST00000593919 EXOC1Q9NV70 894 aa14.71□□□□□ -0.06
VRK3-205ENST00000593919 TELO2Q9Y4R8 837 aa14.71□□□□□ -0.06
VRK3-205ENST00000593919 ASB14A6NK59 587 aa14.7□□□□□ -0.06
VRK3-205ENST00000593919 ECM2O94769 699 aaPredicted RBP14.7□□□□□ -0.06
VRK3-205ENST00000593919 UBA1P22314 1058 aaKnown RBP14.7□□□□□ -0.06
VRK3-205ENST00000593919 QARSP47897 775 aaKnown RBP14.7□□□□□ -0.06
VRK3-205ENST00000593919 UGCGQ16739 394 aa14.7□□□□□ -0.06
VRK3-205ENST00000593919 ARSHQ5FYA8 562 aa14.7□□□□□ -0.06
VRK3-205ENST00000593919 UNC13DQ70J99 1090 aa14.7□□□□□ -0.06
VRK3-205ENST00000593919 ARMCX2Q7L311 632 aa14.7□□□□□ -0.06
VRK3-205ENST00000593919 CYFIP1Q7L576 1253 aa14.7□□□□□ -0.06
VRK3-205ENST00000593919 LRRC8AQ8IWT6 810 aa14.7□□□□□ -0.06
VRK3-205ENST00000593919 SMAP1Q8IYB5 467 aaPredicted RBP14.7□□□□□ -0.06
VRK3-205ENST00000593919 RDM1Q8NG50 284 aa14.7□□□□□ -0.06
VRK3-205ENST00000593919 ZSWIM4Q9H7M6 989 aa14.7□□□□□ -0.06
VRK3-205ENST00000593919 ZFYVE28Q9HCC9 887 aa14.7□□□□□ -0.06
VRK3-205ENST00000593919 PCDHA10Q9Y5I2 948 aa14.7□□□□□ -0.06
VRK3-205ENST00000593919 ARID2Q68CP9 1835 aa14.69□□□□□ -0.06
VRK3-205ENST00000593919 NPHP3-ACAD11A0A0J9YXS1 232 aa14.69□□□□□ -0.06
VRK3-205ENST00000593919 PVALEFA0A1B0GWK0 134 aa14.69□□□□□ -0.06
VRK3-205ENST00000593919 PPP1R3GB7ZBB8 358 aa14.69□□□□□ -0.06
VRK3-205ENST00000593919 TGFB3P10600 412 aa14.69□□□□□ -0.06
VRK3-205ENST00000593919 IDEP14735 1019 aa14.69□□□□□ -0.06
VRK3-205ENST00000593919 MYL5Q02045 173 aa14.69□□□□□ -0.06
VRK3-205ENST00000593919 RAD51AP2Q09MP3 1159 aa14.69□□□□□ -0.06
VRK3-205ENST00000593919 KLHL10Q6JEL2 608 aa14.69□□□□□ -0.06
VRK3-205ENST00000593919 DPP9Q86TI2 863 aa14.69□□□□□ -0.06
VRK3-205ENST00000593919 IFNLR1Q8IU57 520 aaPredicted RBP14.69□□□□□ -0.06
VRK3-205ENST00000593919 GIMAP8Q8ND71 665 aaPredicted RBP14.69□□□□□ -0.06
VRK3-205ENST00000593919 CCDC47Q96A33 483 aaKnown RBP14.69□□□□□ -0.06
VRK3-205ENST00000593919 NACC1Q96RE7 527 aa14.69□□□□□ -0.06
VRK3-205ENST00000593919 BMP2KQ9NSY1 1161 aaPredicted RBP14.69□□□□□ -0.06
VRK3-205ENST00000593919 ARIH2O95376 493 aa14.69□□□□□ -0.06
VRK3-205ENST00000593919 CDK11BP21127 795 aaKnown RBP14.69□□□□□ -0.06
VRK3-205ENST00000593919 ACTR2P61160 394 aa14.69□□□□□ -0.06
VRK3-205ENST00000593919 CACNB1Q02641 598 aaPredicted RBP14.69□□□□□ -0.06
VRK3-205ENST00000593919 TRMT44Q8IYL2 757 aaKnown RBP14.69□□□□□ -0.06
VRK3-205ENST00000593919 HPS3Q969F9 1004 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms