RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 IGBP1P78318 339 aa16.89■□□□□ 0.29
PNKP-202ENST00000593706 LPIN1Q14693 890 aa16.89■□□□□ 0.29
PNKP-202ENST00000593706 TMTC2Q8N394 836 aa16.89■□□□□ 0.29
PNKP-202ENST00000593706 SRBD1Q8N5C6 995 aaKnown RBP16.89■□□□□ 0.29
PNKP-202ENST00000593706 DNAJB3Q8WWF6 145 aa16.89■□□□□ 0.29
PNKP-202ENST00000593706 SEPT1Q8WYJ6 367 aa16.89■□□□□ 0.29
PNKP-202ENST00000593706 TMEM87BQ96K49 555 aa16.89■□□□□ 0.29
PNKP-202ENST00000593706 MTA3Q9BTC8 594 aa16.89■□□□□ 0.29
PNKP-202ENST00000593706 EHMT1Q9H9B1 1298 aa16.89■□□□□ 0.29
PNKP-202ENST00000593706 ARIH1Q9Y4X5 557 aaPredicted RBP16.89■□□□□ 0.29
PNKP-202ENST00000593706 hCG_1642624A0A1W2PR95 340 aa16.88■□□□□ 0.29
PNKP-202ENST00000593706 SH2B2O14492 632 aaPredicted RBP16.88■□□□□ 0.29
PNKP-202ENST00000593706 CSPG5O95196 566 aa16.88■□□□□ 0.29
PNKP-202ENST00000593706 ITGB5P18084 799 aa16.88■□□□□ 0.29
PNKP-202ENST00000593706 HEATR3Q7Z4Q2 680 aa16.88■□□□□ 0.29
PNKP-202ENST00000593706 RPAINQ86UA6 219 aa16.88■□□□□ 0.29
PNKP-202ENST00000593706 RAB11FIP4Q86YS3 637 aa16.88■□□□□ 0.29
PNKP-202ENST00000593706 CCDC82Q8N4S0 544 aa16.88■□□□□ 0.29
PNKP-202ENST00000593706 FAM49AQ9H0Q0 323 aaPredicted RBP16.88■□□□□ 0.29
PNKP-202ENST00000593706 SMARCAD1Q9H4L7 1026 aa16.88■□□□□ 0.29
PNKP-202ENST00000593706 SLC12A7Q9Y666 1083 aa16.88■□□□□ 0.29
PNKP-202ENST00000593706 CDY2AQ9Y6F7 541 aa16.88■□□□□ 0.29
PNKP-202ENST00000593706 GSTTP1A0A1W2PQM5 241 aa16.87■□□□□ 0.29
PNKP-202ENST00000593706 CDC45O75419 566 aa16.87■□□□□ 0.29
PNKP-202ENST00000593706 ALADP13716 330 aa16.87■□□□□ 0.29
PNKP-202ENST00000593706 MRPS6P82932 125 aaKnown RBP16.87■□□□□ 0.29
PNKP-202ENST00000593706 MGAT3Q09327 533 aa16.87■□□□□ 0.29
PNKP-202ENST00000593706 BTG3Q14201 252 aaPredicted RBP16.87■□□□□ 0.29
PNKP-202ENST00000593706 CSPP1Q1MSJ5 1256 aa16.87■□□□□ 0.29
PNKP-202ENST00000593706 FBXO47Q5MNV8 452 aa16.87■□□□□ 0.29
PNKP-202ENST00000593706 CREB3L3Q68CJ9 461 aa16.87■□□□□ 0.29
PNKP-202ENST00000593706 TSHZ1Q6ZSZ6 1077 aa16.87■□□□□ 0.29
PNKP-202ENST00000593706 MICU3Q86XE3 530 aa16.87■□□□□ 0.29
PNKP-202ENST00000593706 LMAN2LQ9H0V9 348 aa16.87■□□□□ 0.29
PNKP-202ENST00000593706 AZI2Q9H6S1 392 aa16.87■□□□□ 0.29
PNKP-202ENST00000593706 JPH1Q9HDC5 661 aaPredicted RBP16.87■□□□□ 0.29
PNKP-202ENST00000593706 ANO2Q9NQ90 1003 aa16.87■□□□□ 0.29
PNKP-202ENST00000593706 TRPC6Q9Y210 931 aa16.87■□□□□ 0.29
PNKP-202ENST00000593706 PRR33A8MZF0 331 aa16.86■□□□□ 0.29
PNKP-202ENST00000593706 C5orf67F2Z3F1 127 aa16.86■□□□□ 0.29
PNKP-202ENST00000593706 M0QZ92 97 aa16.86■□□□□ 0.29
PNKP-202ENST00000593706 RPLP2P05387 115 aaKnown RBP16.86■□□□□ 0.29
PNKP-202ENST00000593706 RB1P06400 928 aa16.86■□□□□ 0.29
PNKP-202ENST00000593706 BMPR1AP36894 532 aa16.86■□□□□ 0.29
PNKP-202ENST00000593706 UIMC1Q96RL1 719 aa16.86■□□□□ 0.29
PNKP-202ENST00000593706 RC3H2Q9HBD1 1191 aaKnown RBP16.86■□□□□ 0.29
PNKP-202ENST00000593706 PCDHA6Q9UN73 950 aa16.86■□□□□ 0.29
PNKP-202ENST00000593706 PCDHA8Q9Y5H6 950 aa16.86■□□□□ 0.29
PNKP-202ENST00000593706 UBIAD1Q9Y5Z9 338 aa16.86■□□□□ 0.29
PNKP-202ENST00000593706 ZNF318Q5VUA4 2279 aa16.86■□□□□ 0.29
PNKP-202ENST00000593706 MBLAC1A4D2B0 266 aaPredicted RBP16.85■□□□□ 0.29
PNKP-202ENST00000593706 GRM6O15303 877 aa16.85■□□□□ 0.29
PNKP-202ENST00000593706 NCK2O43639 380 aa16.85■□□□□ 0.29
PNKP-202ENST00000593706 CD52P31358 61 aa16.85■□□□□ 0.29
PNKP-202ENST00000593706 LIFRP42702 1097 aa16.85■□□□□ 0.29
PNKP-202ENST00000593706 CLUL1Q15846 466 aa16.85■□□□□ 0.29
PNKP-202ENST00000593706 MARCH8Q5T0T0 291 aa16.85■□□□□ 0.29
PNKP-202ENST00000593706 IER5Q5VY09 327 aa16.85■□□□□ 0.29
PNKP-202ENST00000593706 TMTC3Q6ZXV5 915 aa16.85■□□□□ 0.29
PNKP-202ENST00000593706 TNPO1Q92973 898 aaKnown RBP16.85■□□□□ 0.29
PNKP-202ENST00000593706 SDF4Q9BRK5 362 aa16.85■□□□□ 0.29
PNKP-202ENST00000593706 LRRC2Q9BYS8 371 aa16.85■□□□□ 0.29
PNKP-202ENST00000593706 JADE2Q9NQC1 790 aa16.85■□□□□ 0.29
PNKP-202ENST00000593706 SLC9A2Q9UBY0 812 aa16.85■□□□□ 0.29
PNKP-202ENST00000593706 RRN3P2A6NIE6 340 aa16.84■□□□□ 0.29
PNKP-202ENST00000593706 ENPP3O14638 875 aa16.84■□□□□ 0.29
PNKP-202ENST00000593706 MAFGO15525 162 aa16.84■□□□□ 0.29
PNKP-202ENST00000593706 INSRRP14616 1297 aa16.84■□□□□ 0.29
PNKP-202ENST00000593706 HOXD11P31277 338 aaPredicted RBP16.84■□□□□ 0.29
PNKP-202ENST00000593706 ZP2Q05996 745 aa16.84■□□□□ 0.29
PNKP-202ENST00000593706 TMEM62Q0P6H9 643 aa16.84■□□□□ 0.29
PNKP-202ENST00000593706 COL19A1Q14993 1142 aa16.84■□□□□ 0.29
PNKP-202ENST00000593706 SYNE3Q6ZMZ3 975 aa16.84■□□□□ 0.29
PNKP-202ENST00000593706 FANCBQ8NB91 859 aa16.84■□□□□ 0.29
PNKP-202ENST00000593706 CLP1Q92989 425 aaKnown RBP16.84■□□□□ 0.29
PNKP-202ENST00000593706 ZBTB10Q96DT7 871 aa16.84■□□□□ 0.29
PNKP-202ENST00000593706 PRKAG3Q9UGI9 489 aa16.84■□□□□ 0.29
PNKP-202ENST00000593706 DCXO43602 365 aa16.83■□□□□ 0.28
PNKP-202ENST00000593706 MMP1P03956 469 aa16.83■□□□□ 0.28
PNKP-202ENST00000593706 NAPAP54920 295 aa16.83■□□□□ 0.28
PNKP-202ENST00000593706 HYAL1Q12794 435 aa16.83■□□□□ 0.28
PNKP-202ENST00000593706 PAK2Q13177 524 aa16.83■□□□□ 0.28
PNKP-202ENST00000593706 RASEFQ8IZ41 740 aa16.83■□□□□ 0.28
PNKP-202ENST00000593706 LINC01599Q8WXQ3 324 aa16.83■□□□□ 0.28
PNKP-202ENST00000593706 CNTNAP5Q8WYK1 1306 aa16.83■□□□□ 0.28
PNKP-202ENST00000593706 ZNF689Q96CS4 500 aaPredicted RBP16.83■□□□□ 0.28
PNKP-202ENST00000593706 PLVAPQ9BX97 442 aa16.83■□□□□ 0.28
PNKP-202ENST00000593706 FTHL17Q9BXU8 183 aa16.83■□□□□ 0.28
PNKP-202ENST00000593706 AGO3Q9H9G7 860 aaKnown RBP16.83■□□□□ 0.28
PNKP-202ENST00000593706 KCNH7Q9NS40 1196 aa16.83■□□□□ 0.28
PNKP-202ENST00000593706 TRPV2Q9Y5S1 764 aa16.83■□□□□ 0.28
PNKP-202ENST00000593706 DGKIO75912 1065 aa16.82■□□□□ 0.28
PNKP-202ENST00000593706 LINC00271P0C7V0 271 aa16.82■□□□□ 0.28
PNKP-202ENST00000593706 IBSPP21815 317 aaPredicted RBP16.82■□□□□ 0.28
PNKP-202ENST00000593706 ACTR2P61160 394 aa16.82■□□□□ 0.28
PNKP-202ENST00000593706 TSGA10IPQ3SY00 556 aa16.82■□□□□ 0.28
PNKP-202ENST00000593706 PAN2Q504Q3 1202 aaKnown RBP16.82■□□□□ 0.28
PNKP-202ENST00000593706 WWC2Q6AWC2 1192 aa16.82■□□□□ 0.28
PNKP-202ENST00000593706 NPAS4Q8IUM7 802 aa16.82■□□□□ 0.28
PNKP-202ENST00000593706 ADHFE1Q8IWW8 467 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms