RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 TAF2Q6P1X5 1199 aa20.48■□□□□ 0.87
CIRBP-243ENST00000593128 APBB2Q92870 758 aa20.48■□□□□ 0.87
CIRBP-243ENST00000593128 HMGB1P09429 215 aaKnown RBP20.47■□□□□ 0.87
CIRBP-243ENST00000593128 ACTR2P61160 394 aa20.47■□□□□ 0.87
CIRBP-243ENST00000593128 HTRA4P83105 476 aaPredicted RBP20.47■□□□□ 0.87
CIRBP-243ENST00000593128 TMEM62Q0P6H9 643 aa20.47■□□□□ 0.87
CIRBP-243ENST00000593128 FUT2Q10981 343 aa20.47■□□□□ 0.87
CIRBP-243ENST00000593128 MKRN4PQ13434 485 aaPredicted RBP20.47■□□□□ 0.87
CIRBP-243ENST00000593128 FAM26DQ5JW98 314 aa20.47■□□□□ 0.87
CIRBP-243ENST00000593128 JAKMIP3Q5VZ66 844 aa20.47■□□□□ 0.87
CIRBP-243ENST00000593128 Q6ZUG5 572 aa20.47■□□□□ 0.87
CIRBP-243ENST00000593128 TOP1MTQ969P6 601 aa20.47■□□□□ 0.87
CIRBP-243ENST00000593128 BARHL2Q9NY43 387 aa20.47■□□□□ 0.87
CIRBP-243ENST00000593128 CDY2AQ9Y6F7 541 aa20.47■□□□□ 0.87
CIRBP-243ENST00000593128 NLRC5Q86WI3 1866 aa20.47■□□□□ 0.87
CIRBP-243ENST00000593128 FOSP01100 380 aaPredicted RBP20.46■□□□□ 0.87
CIRBP-243ENST00000593128 INSRRP14616 1297 aa20.46■□□□□ 0.87
CIRBP-243ENST00000593128 ADD1P35611 737 aaKnown RBP20.46■□□□□ 0.87
CIRBP-243ENST00000593128 TSGA10IPQ3SY00 556 aa20.46■□□□□ 0.87
CIRBP-243ENST00000593128 CEP55Q53EZ4 464 aa20.46■□□□□ 0.87
CIRBP-243ENST00000593128 TRAPPC12Q8WVT3 735 aa20.46■□□□□ 0.87
CIRBP-243ENST00000593128 BRF1Q92994 677 aa20.46■□□□□ 0.87
CIRBP-243ENST00000593128 CCDC136Q96JN2 1154 aa20.46■□□□□ 0.87
CIRBP-243ENST00000593128 PCYT2Q99447 389 aa20.46■□□□□ 0.87
CIRBP-243ENST00000593128 AGO4Q9HCK5 861 aaKnown RBP20.46■□□□□ 0.87
CIRBP-243ENST00000593128 LMCD1Q9NZU5 365 aa20.46■□□□□ 0.87
CIRBP-243ENST00000593128 hCG_1984214I3L0E3 225 aa20.45■□□□□ 0.86
CIRBP-243ENST00000593128 IBSPP21815 317 aaPredicted RBP20.45■□□□□ 0.86
CIRBP-243ENST00000593128 MGAT3Q09327 533 aa20.45■□□□□ 0.86
CIRBP-243ENST00000593128 LPIN1Q14693 890 aa20.45■□□□□ 0.86
CIRBP-243ENST00000593128 EPC2Q52LR7 807 aa20.45■□□□□ 0.86
CIRBP-243ENST00000593128 MARCH8Q5T0T0 291 aa20.45■□□□□ 0.86
CIRBP-243ENST00000593128 BLOC1S2Q6QNY1 142 aa20.45■□□□□ 0.86
CIRBP-243ENST00000593128 ZNF713Q8N859 430 aaPredicted RBP20.45■□□□□ 0.86
CIRBP-243ENST00000593128 FAM217BQ9NTX9 383 aaPredicted RBP20.45■□□□□ 0.86
CIRBP-243ENST00000593128 MUC3AQ02505 3323 aa20.45■□□□□ 0.86
CIRBP-243ENST00000593128 RRN3P2A6NIE6 340 aa20.44■□□□□ 0.86
CIRBP-243ENST00000593128 M0QZ92 97 aa20.44■□□□□ 0.86
CIRBP-243ENST00000593128 BACH1O14867 736 aa20.44■□□□□ 0.86
CIRBP-243ENST00000593128 PPFIA3O75145 1194 aa20.44■□□□□ 0.86
CIRBP-243ENST00000593128 CSPG5O95196 566 aa20.44■□□□□ 0.86
CIRBP-243ENST00000593128 STAT5BP51692 787 aa20.44■□□□□ 0.86
CIRBP-243ENST00000593128 MRPS6P82932 125 aaKnown RBP20.44■□□□□ 0.86
CIRBP-243ENST00000593128 ITGB3BPQ13352 177 aaPredicted RBP20.44■□□□□ 0.86
CIRBP-243ENST00000593128 AP3B2Q13367 1082 aa20.44■□□□□ 0.86
CIRBP-243ENST00000593128 GPM6BQ13491 265 aa20.44■□□□□ 0.86
CIRBP-243ENST00000593128 SP7Q8TDD2 431 aaPredicted RBP20.44■□□□□ 0.86
CIRBP-243ENST00000593128 TNPO1Q92973 898 aaKnown RBP20.44■□□□□ 0.86
CIRBP-243ENST00000593128 IL17RAQ96F46 866 aa20.44■□□□□ 0.86
CIRBP-243ENST00000593128 GLT8D2Q9H1C3 349 aa20.44■□□□□ 0.86
CIRBP-243ENST00000593128 TTC28Q96AY4 2481 aa20.44■□□□□ 0.86
CIRBP-243ENST00000593128 CCDC196A0A1B0GTZ2 297 aa20.43■□□□□ 0.86
CIRBP-243ENST00000593128 MBLAC1A4D2B0 266 aaPredicted RBP20.43■□□□□ 0.86
CIRBP-243ENST00000593128 SCG2P13521 617 aa20.43■□□□□ 0.86
CIRBP-243ENST00000593128 CTNNB1P35222 781 aa20.43■□□□□ 0.86
CIRBP-243ENST00000593128 SREBF1P36956 1147 aa20.43■□□□□ 0.86
CIRBP-243ENST00000593128 PLCB4Q15147 1175 aa20.43■□□□□ 0.86
CIRBP-243ENST00000593128 PTPROQ16827 1216 aa20.43■□□□□ 0.86
CIRBP-243ENST00000593128 PFKFB3Q16875 520 aaPredicted RBP20.43■□□□□ 0.86
CIRBP-243ENST00000593128 FBXO47Q5MNV8 452 aa20.43■□□□□ 0.86
CIRBP-243ENST00000593128 EP400NLQ6ZTU2 488 aa20.43■□□□□ 0.86
CIRBP-243ENST00000593128 PLA2G4DQ86XP0 818 aa20.43■□□□□ 0.86
CIRBP-243ENST00000593128 TMEM192Q8IY95 271 aa20.43■□□□□ 0.86
CIRBP-243ENST00000593128 FIBCD1Q8N539 461 aa20.43■□□□□ 0.86
CIRBP-243ENST00000593128 SAMD11Q96NU1 681 aa20.43■□□□□ 0.86
CIRBP-243ENST00000593128 SNX14Q9Y5W7 946 aa20.43■□□□□ 0.86
CIRBP-243ENST00000593128 NFASCO94856 1347 aa20.43■□□□□ 0.86
CIRBP-243ENST00000593128 LOXHD1Q8IVV2 1947 aa20.43■□□□□ 0.86
CIRBP-243ENST00000593128 CD52P31358 61 aa20.42■□□□□ 0.86
CIRBP-243ENST00000593128 AKAP17AQ02040 695 aaKnown RBP20.42■□□□□ 0.86
CIRBP-243ENST00000593128 IER5Q5VY09 327 aa20.42■□□□□ 0.86
CIRBP-243ENST00000593128 TSHZ1Q6ZSZ6 1077 aa20.42■□□□□ 0.86
CIRBP-243ENST00000593128 TRMT1LQ7Z2T5 733 aaKnown RBP20.42■□□□□ 0.86
CIRBP-243ENST00000593128 RPAINQ86UA6 219 aa20.42■□□□□ 0.86
CIRBP-243ENST00000593128 TCEAL9Q9UHQ7 104 aa20.42■□□□□ 0.86
CIRBP-243ENST00000593128 TRPV2Q9Y5S1 764 aa20.42■□□□□ 0.86
CIRBP-243ENST00000593128 RALGAPA2Q2PPJ7 1873 aa20.41■□□□□ 0.86
CIRBP-243ENST00000593128 POTEB3A0JP26 581 aa20.41■□□□□ 0.86
CIRBP-243ENST00000593128 MEIS1O00470 390 aa20.41■□□□□ 0.86
CIRBP-243ENST00000593128 KCNA5P22460 613 aa20.41■□□□□ 0.86
CIRBP-243ENST00000593128 CLK2P49760 499 aaKnown RBP20.41■□□□□ 0.86
CIRBP-243ENST00000593128 POTEBQ6S5H4 581 aa20.41■□□□□ 0.86
CIRBP-243ENST00000593128 PHKBQ93100 1093 aa20.41■□□□□ 0.86
CIRBP-243ENST00000593128 MRPL38Q96DV4 380 aaKnown RBP20.41■□□□□ 0.86
CIRBP-243ENST00000593128 UBE2ZQ9H832 354 aaPredicted RBP20.41■□□□□ 0.86
CIRBP-243ENST00000593128 C6orf50Q9HD87 102 aa20.41■□□□□ 0.86
CIRBP-243ENST00000593128 GINS2Q9Y248 185 aa20.41■□□□□ 0.86
CIRBP-243ENST00000593128 FAM86B1E9PN63 330 aa20.4■□□□□ 0.86
CIRBP-243ENST00000593128 ENPP3O14638 875 aa20.4■□□□□ 0.86
CIRBP-243ENST00000593128 ADAMTS3O15072 1205 aa20.4■□□□□ 0.86
CIRBP-243ENST00000593128 CCNE2O96020 404 aa20.4■□□□□ 0.86
CIRBP-243ENST00000593128 FAM86B2P0C5J1 330 aa20.4■□□□□ 0.86
CIRBP-243ENST00000593128 HSPA4P34932 840 aa20.4■□□□□ 0.86
CIRBP-243ENST00000593128 RCAN1P53805 252 aa20.4■□□□□ 0.86
CIRBP-243ENST00000593128 FAM160B1Q5W0V3 765 aa20.4■□□□□ 0.86
CIRBP-243ENST00000593128 PLPPR4Q7Z2D5 763 aa20.4■□□□□ 0.86
CIRBP-243ENST00000593128 CKAP2LQ8IYA6 745 aa20.4■□□□□ 0.86
CIRBP-243ENST00000593128 CCDC12Q8WUD4 166 aaPredicted RBP20.4■□□□□ 0.86
CIRBP-243ENST00000593128 ZNF577Q9BSK1 485 aa20.4■□□□□ 0.86
CIRBP-243ENST00000593128 SLC26A6Q9BXS9 759 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms