RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 TBCAO75347 108 aaKnown RBP21.73■■□□□ 1.07
CLIP3-206ENST00000593074 AMPD2Q01433 879 aa21.73■■□□□ 1.07
CLIP3-206ENST00000593074 ADAM9Q13443 819 aa21.73■■□□□ 1.07
CLIP3-206ENST00000593074 MTMR2Q13614 643 aa21.73■■□□□ 1.07
CLIP3-206ENST00000593074 CTTNQ14247 550 aaKnown RBP21.73■■□□□ 1.07
CLIP3-206ENST00000593074 B3GNT9Q6UX72 402 aa21.73■■□□□ 1.07
CLIP3-206ENST00000593074 KIAA1328Q86T90 577 aa21.73■■□□□ 1.07
CLIP3-206ENST00000593074 SCYL3Q8IZE3 742 aa21.73■■□□□ 1.07
CLIP3-206ENST00000593074 GPR161Q8N6U8 529 aaKnown RBP21.73■■□□□ 1.07
CLIP3-206ENST00000593074 CEP112Q8N8E3 955 aa21.73■■□□□ 1.07
CLIP3-206ENST00000593074 EHBP1Q8NDI1 1231 aa21.73■■□□□ 1.07
CLIP3-206ENST00000593074 RABGGTAQ92696 567 aa21.73■■□□□ 1.07
CLIP3-206ENST00000593074 JAKMIP2Q96AA8 810 aa21.73■■□□□ 1.07
CLIP3-206ENST00000593074 DYDC2Q96IM9 177 aa21.73■■□□□ 1.07
CLIP3-206ENST00000593074 OLFML3Q9NRN5 406 aa21.73■■□□□ 1.07
CLIP3-206ENST00000593074 ZNF112Q9UJU3 913 aa21.73■■□□□ 1.07
CLIP3-206ENST00000593074 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.73■■□□□ 1.07
CLIP3-206ENST00000593074 LRRC53A6NM62 1247 aa21.72■■□□□ 1.07
CLIP3-206ENST00000593074 RSPH10B2B2RC85 870 aa21.72■■□□□ 1.07
CLIP3-206ENST00000593074 CETN3O15182 167 aa21.72■■□□□ 1.07
CLIP3-206ENST00000593074 KRT86O43790 486 aa21.72■■□□□ 1.07
CLIP3-206ENST00000593074 RSPH10BP0C881 870 aa21.72■■□□□ 1.07
CLIP3-206ENST00000593074 GAP43P17677 238 aa21.72■■□□□ 1.07
CLIP3-206ENST00000593074 CLCN6P51797 869 aa21.72■■□□□ 1.07
CLIP3-206ENST00000593074 SPP2Q13103 211 aa21.72■■□□□ 1.07
CLIP3-206ENST00000593074 RINT1Q6NUQ1 792 aa21.72■■□□□ 1.07
CLIP3-206ENST00000593074 PDXDC1Q6P996 788 aa21.72■■□□□ 1.07
CLIP3-206ENST00000593074 SLC30A10Q6XR72 485 aa21.72■■□□□ 1.07
CLIP3-206ENST00000593074 MCF2L2Q86YR7 1114 aa21.72■■□□□ 1.07
CLIP3-206ENST00000593074 CCDC155Q8N6L0 562 aa21.72■■□□□ 1.07
CLIP3-206ENST00000593074 SMCR8Q8TEV9 937 aaPredicted RBP21.72■■□□□ 1.07
CLIP3-206ENST00000593074 CCDC42Q96M95 316 aa21.72■■□□□ 1.07
CLIP3-206ENST00000593074 ZNF577Q9BSK1 485 aa21.72■■□□□ 1.07
CLIP3-206ENST00000593074 ZNF446Q9NWS9 450 aa21.72■■□□□ 1.07
CLIP3-206ENST00000593074 GPRC5DQ9NZD1 345 aa21.72■■□□□ 1.07
CLIP3-206ENST00000593074 RCCD1A6NED2 376 aa21.71■■□□□ 1.07
CLIP3-206ENST00000593074 PDXKO00764 312 aa21.71■■□□□ 1.07
CLIP3-206ENST00000593074 FLOT1O75955 427 aa21.71■■□□□ 1.07
CLIP3-206ENST00000593074 LCA5LO95447 670 aa21.71■■□□□ 1.07
CLIP3-206ENST00000593074 MYBP10242 640 aa21.71■■□□□ 1.07
CLIP3-206ENST00000593074 NR2F2P24468 414 aa21.71■■□□□ 1.07
CLIP3-206ENST00000593074 DGKZQ13574 1117 aa21.71■■□□□ 1.07
CLIP3-206ENST00000593074 CPXCR1Q8N123 301 aa21.71■■□□□ 1.07
CLIP3-206ENST00000593074 CLEC4DQ8WXI8 215 aa21.71■■□□□ 1.07
CLIP3-206ENST00000593074 PURBQ96QR8 312 aaKnown RBP21.71■■□□□ 1.07
CLIP3-206ENST00000593074 AS3MTQ9HBK9 375 aa21.71■■□□□ 1.07
CLIP3-206ENST00000593074 SLC38A10Q9HBR0 1119 aa21.71■■□□□ 1.07
CLIP3-206ENST00000593074 OGFRQ9NZT2 677 aa21.71■■□□□ 1.07
CLIP3-206ENST00000593074 CEP72Q9P209 647 aa21.71■■□□□ 1.07
CLIP3-206ENST00000593074 ZNF263O14978 683 aa21.71■■□□□ 1.07
CLIP3-206ENST00000593074 CHMP2AO43633 222 aa21.71■■□□□ 1.07
CLIP3-206ENST00000593074 PLEKP08567 350 aaPredicted RBP21.71■■□□□ 1.07
CLIP3-206ENST00000593074 ARP10275 920 aa21.71■■□□□ 1.07
CLIP3-206ENST00000593074 BCRP11274 1271 aa21.71■■□□□ 1.07
CLIP3-206ENST00000593074 VCAM1P19320 739 aa21.71■■□□□ 1.07
CLIP3-206ENST00000593074 VAV2P52735 878 aa21.71■■□□□ 1.07
CLIP3-206ENST00000593074 CHMP4BP1P59074 171 aa21.71■■□□□ 1.07
CLIP3-206ENST00000593074 TEX35Q5T0J7 233 aa21.71■■□□□ 1.07
CLIP3-206ENST00000593074 C1orf186Q6ZWK4 172 aa21.71■■□□□ 1.07
CLIP3-206ENST00000593074 RRAGAQ7L523 313 aa21.71■■□□□ 1.07
CLIP3-206ENST00000593074 KRT26Q7Z3Y9 468 aa21.71■■□□□ 1.07
CLIP3-206ENST00000593074 PIGOQ8TEQ8 1089 aa21.71■■□□□ 1.07
CLIP3-206ENST00000593074 UPF1Q92900 1129 aaKnown RBP eCLIP21.71■■□□□ 1.07
CLIP3-206ENST00000593074 MXRA8Q9BRK3 442 aa21.71■■□□□ 1.07
CLIP3-206ENST00000593074 LACRTQ9GZZ8 138 aa21.71■■□□□ 1.07
CLIP3-206ENST00000593074 UNC45AQ9H3U1 944 aa21.71■■□□□ 1.07
CLIP3-206ENST00000593074 PICK1Q9NRD5 415 aa21.71■■□□□ 1.07
CLIP3-206ENST00000593074 ARGLU1Q9NWB6 273 aaPredicted RBP21.71■■□□□ 1.07
CLIP3-206ENST00000593074 CTDP1Q9Y5B0 961 aaPredicted RBP21.71■■□□□ 1.07
CLIP3-206ENST00000593074 FRMPD4Q14CM0 1322 aa21.71■■□□□ 1.07
CLIP3-206ENST00000593074 NOL4O94818 638 aa21.7■■□□□ 1.06
CLIP3-206ENST00000593074 WHAMMP3Q1A5X7 153 aa21.7■■□□□ 1.06
CLIP3-206ENST00000593074 PRAMEF18Q5VWM3 479 aa21.7■■□□□ 1.06
CLIP3-206ENST00000593074 TPH2Q8IWU9 490 aa21.7■■□□□ 1.06
CLIP3-206ENST00000593074 GPC2Q8N158 579 aa21.7■■□□□ 1.06
CLIP3-206ENST00000593074 TRPM4Q8TD43 1214 aa21.7■■□□□ 1.06
CLIP3-206ENST00000593074 WRNIP1Q96S55 665 aa21.7■■□□□ 1.06
CLIP3-206ENST00000593074 RIT2Q99578 217 aa21.7■■□□□ 1.06
CLIP3-206ENST00000593074 RPAP3Q9H6T3 665 aaPredicted RBP21.7■■□□□ 1.06
CLIP3-206ENST00000593074 RAVER2Q9HCJ3 691 aaKnown RBP21.7■■□□□ 1.06
CLIP3-206ENST00000593074 TYW1Q9NV66 732 aaKnown RBP21.7■■□□□ 1.06
CLIP3-206ENST00000593074 PPP1R9AQ9ULJ8 1098 aa21.7■■□□□ 1.06
CLIP3-206ENST00000593074 TFR2Q9UP52 801 aa21.7■■□□□ 1.06
CLIP3-206ENST00000593074 IPO5O00410 1097 aaKnown RBP21.7■■□□□ 1.06
CLIP3-206ENST00000593074 NFIBO00712 420 aa21.7■■□□□ 1.06
CLIP3-206ENST00000593074 ALAS1P13196 640 aa21.7■■□□□ 1.06
CLIP3-206ENST00000593074 BACE1P56817 501 aa21.7■■□□□ 1.06
CLIP3-206ENST00000593074 EPHA7Q15375 998 aa21.7■■□□□ 1.06
CLIP3-206ENST00000593074 FRMD5Q7Z6J6 570 aa21.7■■□□□ 1.06
CLIP3-206ENST00000593074 SYN2Q92777 582 aaPredicted RBP21.7■■□□□ 1.06
CLIP3-206ENST00000593074 ZKSCAN4Q969J2 545 aaPredicted RBP21.7■■□□□ 1.06
CLIP3-206ENST00000593074 TEKT3Q9BXF9 490 aa21.7■■□□□ 1.06
CLIP3-206ENST00000593074 TSGA10Q9BZW7 698 aa21.7■■□□□ 1.06
CLIP3-206ENST00000593074 NUCKS1Q9H1E3 243 aaKnown RBP21.7■■□□□ 1.06
CLIP3-206ENST00000593074 COL20A1Q9P218 1284 aa21.7■■□□□ 1.06
CLIP3-206ENST00000593074 PNMA2Q9UL42 364 aa21.7■■□□□ 1.06
CLIP3-206ENST00000593074 ASTN1O14525 1302 aa21.69■■□□□ 1.06
CLIP3-206ENST00000593074 LOXHD1Q8IVV2 1947 aa21.69■■□□□ 1.06
CLIP3-206ENST00000593074 SPDYE4A6NLX3 237 aa21.69■■□□□ 1.06
CLIP3-206ENST00000593074 CALUO43852 315 aaPredicted RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms