RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 ECM1Q16610 540 aa10.87□□□□□ -0.67
DDX39A-220ENST00000593008 NBPF20Q3BBV1 942 aa10.87□□□□□ -0.67
DDX39A-220ENST00000593008 HSDL1Q3SXM5 330 aa10.87□□□□□ -0.67
DDX39A-220ENST00000593008 FAM47CQ5HY64 1035 aa10.87□□□□□ -0.67
DDX39A-220ENST00000593008 AXDND1Q5T1B0 1012 aaPredicted RBP10.87□□□□□ -0.67
DDX39A-220ENST00000593008 B3GNT9Q6UX72 402 aa10.87□□□□□ -0.67
DDX39A-220ENST00000593008 DHX37Q8IY37 1157 aaKnown RBP10.87□□□□□ -0.67
DDX39A-220ENST00000593008 SLC43A3Q8NBI5 491 aa10.87□□□□□ -0.67
DDX39A-220ENST00000593008 SPATA32Q96LK8 384 aa10.87□□□□□ -0.67
DDX39A-220ENST00000593008 PPP1R12CQ9BZL4 782 aa10.87□□□□□ -0.67
DDX39A-220ENST00000593008 CSRNP2Q9H175 543 aa10.87□□□□□ -0.67
DDX39A-220ENST00000593008 TTC12Q9H892 705 aaPredicted RBP10.87□□□□□ -0.67
DDX39A-220ENST00000593008 JPH1Q9HDC5 661 aaPredicted RBP10.87□□□□□ -0.67
DDX39A-220ENST00000593008 TRMT13Q9NUP7 481 aaKnown RBP10.87□□□□□ -0.67
DDX39A-220ENST00000593008 WRAP73Q9P2S5 460 aaPredicted RBP10.87□□□□□ -0.67
DDX39A-220ENST00000593008 A0A087X0B3 334 aa10.86□□□□□ -0.67
DDX39A-220ENST00000593008 GSTTP1A0A1W2PQM5 241 aa10.86□□□□□ -0.67
DDX39A-220ENST00000593008 SOX1O00570 391 aaPredicted RBP10.86□□□□□ -0.67
DDX39A-220ENST00000593008 TLR3O15455 904 aaKnown RBP10.86□□□□□ -0.67
DDX39A-220ENST00000593008 MARCH6O60337 910 aa10.86□□□□□ -0.67
DDX39A-220ENST00000593008 STAM2O75886 525 aa10.86□□□□□ -0.67
DDX39A-220ENST00000593008 YEATS4O95619 227 aa10.86□□□□□ -0.67
DDX39A-220ENST00000593008 ACTR2P61160 394 aa10.86□□□□□ -0.67
DDX39A-220ENST00000593008 CYP4A11Q02928 519 aa10.86□□□□□ -0.67
DDX39A-220ENST00000593008 LAMC2Q13753 1193 aa10.86□□□□□ -0.67
DDX39A-220ENST00000593008 CELF3Q5SZQ8 465 aaKnown RBP10.86□□□□□ -0.67
DDX39A-220ENST00000593008 SHC4Q6S5L8 630 aa10.86□□□□□ -0.67
DDX39A-220ENST00000593008 TDHQ8IZJ6 230 aa10.86□□□□□ -0.67
DDX39A-220ENST00000593008 BANK1Q8NDB2 785 aa10.86□□□□□ -0.67
DDX39A-220ENST00000593008 EPSTI1Q96J88 318 aa10.86□□□□□ -0.67
DDX39A-220ENST00000593008 SPATA33Q96N06 139 aa10.86□□□□□ -0.67
DDX39A-220ENST00000593008 PCYT2Q99447 389 aa10.86□□□□□ -0.67
DDX39A-220ENST00000593008 PLIN2Q99541 437 aa10.86□□□□□ -0.67
DDX39A-220ENST00000593008 MMTAG2Q9BU76 263 aaKnown RBP10.86□□□□□ -0.67
DDX39A-220ENST00000593008 TEKT3Q9BXF9 490 aa10.86□□□□□ -0.67
DDX39A-220ENST00000593008 GOLPH3LQ9H4A5 285 aa10.86□□□□□ -0.67
DDX39A-220ENST00000593008 MLXIPQ9HAP2 919 aa10.86□□□□□ -0.67
DDX39A-220ENST00000593008 RGL1Q9NZL6 768 aa10.86□□□□□ -0.67
DDX39A-220ENST00000593008 RCOR1Q9UKL0 485 aa10.86□□□□□ -0.67
DDX39A-220ENST00000593008 TBX21Q9UL17 535 aa10.86□□□□□ -0.67
DDX39A-220ENST00000593008 PCDHA7Q9UN72 937 aa10.86□□□□□ -0.67
DDX39A-220ENST00000593008 LAMA2P24043 3122 aaKnown RBP10.86□□□□□ -0.67
DDX39A-220ENST00000593008 SZT2Q5T011 3432 aa10.86□□□□□ -0.67
DDX39A-220ENST00000593008 UMODL1Q5DID0 1318 aa10.85□□□□□ -0.67
DDX39A-220ENST00000593008 KPNA6O60684 536 aa10.85□□□□□ -0.67
DDX39A-220ENST00000593008 MED24O75448 989 aa10.85□□□□□ -0.67
DDX39A-220ENST00000593008 TIMP1P01033 207 aa10.85□□□□□ -0.67
DDX39A-220ENST00000593008 CD4P01730 458 aa10.85□□□□□ -0.67
DDX39A-220ENST00000593008 CYP2C9P11712 490 aa10.85□□□□□ -0.67
DDX39A-220ENST00000593008 CYP2C18P33260 490 aa10.85□□□□□ -0.67
DDX39A-220ENST00000593008 ME1P48163 572 aa10.85□□□□□ -0.67
DDX39A-220ENST00000593008 EPHB4P54760 987 aa10.85□□□□□ -0.67
DDX39A-220ENST00000593008 ORC2Q13416 577 aaPredicted RBP10.85□□□□□ -0.67
DDX39A-220ENST00000593008 SHHQ15465 462 aa10.85□□□□□ -0.67
DDX39A-220ENST00000593008 ZRSR1Q15695 479 aaKnown RBP10.85□□□□□ -0.67
DDX39A-220ENST00000593008 DGKDQ16760 1214 aa10.85□□□□□ -0.67
DDX39A-220ENST00000593008 C9orf50Q5SZB4 431 aa10.85□□□□□ -0.67
DDX39A-220ENST00000593008 UTP14CQ5TAP6 766 aaKnown RBP10.85□□□□□ -0.67
DDX39A-220ENST00000593008 KCNV1Q6PIU1 500 aa10.85□□□□□ -0.67
DDX39A-220ENST00000593008 CCDC60Q8IWA6 550 aaPredicted RBP10.85□□□□□ -0.67
DDX39A-220ENST00000593008 PPTC7Q8NI37 304 aa10.85□□□□□ -0.67
DDX39A-220ENST00000593008 SYMPKQ92797 1274 aaKnown RBP10.85□□□□□ -0.67
DDX39A-220ENST00000593008 KAT2BQ92831 832 aa10.85□□□□□ -0.67
DDX39A-220ENST00000593008 EMID1Q96A84 441 aaPredicted RBP10.85□□□□□ -0.67
DDX39A-220ENST00000593008 ZBTB10Q96DT7 871 aa10.85□□□□□ -0.67
DDX39A-220ENST00000593008 LRCH3Q96II8 777 aa10.85□□□□□ -0.67
DDX39A-220ENST00000593008 GPR20Q99678 358 aa10.85□□□□□ -0.67
DDX39A-220ENST00000593008 NAP1L4Q99733 375 aaKnown RBP10.85□□□□□ -0.67
DDX39A-220ENST00000593008 SDF4Q9BRK5 362 aa10.85□□□□□ -0.67
DDX39A-220ENST00000593008 SLC9A2Q9UBY0 812 aa10.85□□□□□ -0.67
DDX39A-220ENST00000593008 NFASCO94856 1347 aa10.84□□□□□ -0.67
DDX39A-220ENST00000593008 A0A1W2PPC1 479 aa10.84□□□□□ -0.67
DDX39A-220ENST00000593008 POTEB3A0JP26 581 aa10.84□□□□□ -0.67
DDX39A-220ENST00000593008 ZBTB39O15060 712 aa10.84□□□□□ -0.67
DDX39A-220ENST00000593008 TBX3O15119 743 aa10.84□□□□□ -0.67
DDX39A-220ENST00000593008 TGFB3P10600 412 aa10.84□□□□□ -0.67
DDX39A-220ENST00000593008 PDIA4P13667 645 aaKnown RBP10.84□□□□□ -0.67
DDX39A-220ENST00000593008 FXR2P51116 673 aaKnown RBP eCLIP10.84□□□□□ -0.67
DDX39A-220ENST00000593008 CCL23P55773 120 aa10.84□□□□□ -0.67
DDX39A-220ENST00000593008 FPGSQ05932 587 aa10.84□□□□□ -0.67
DDX39A-220ENST00000593008 PPP2R5CQ13362 524 aa10.84□□□□□ -0.67
DDX39A-220ENST00000593008 CTTNQ14247 550 aaKnown RBP10.84□□□□□ -0.67
DDX39A-220ENST00000593008 KARSQ15046 597 aaKnown RBP10.84□□□□□ -0.67
DDX39A-220ENST00000593008 POTEBQ6S5H4 581 aa10.84□□□□□ -0.67
DDX39A-220ENST00000593008 POTEGQ6S5H5 508 aa10.84□□□□□ -0.67
DDX39A-220ENST00000593008 METTL7BQ6UX53 244 aa10.84□□□□□ -0.67
DDX39A-220ENST00000593008 DTHD1Q6ZMT9 781 aa10.84□□□□□ -0.67
DDX39A-220ENST00000593008 TRMT1LQ7Z2T5 733 aaKnown RBP10.84□□□□□ -0.67
DDX39A-220ENST00000593008 KCNK18Q7Z418 384 aa10.84□□□□□ -0.67
DDX39A-220ENST00000593008 IGSF22Q8N9C0 903 aa10.84□□□□□ -0.67
DDX39A-220ENST00000593008 KRI1Q8N9T8 703 aaKnown RBP10.84□□□□□ -0.67
DDX39A-220ENST00000593008 DYDC2Q96IM9 177 aa10.84□□□□□ -0.67
DDX39A-220ENST00000593008 CDHR1Q96JP9 859 aa10.84□□□□□ -0.67
DDX39A-220ENST00000593008 FAM20AQ96MK3 541 aa10.84□□□□□ -0.67
DDX39A-220ENST00000593008 PNMA5Q96PV4 448 aa10.84□□□□□ -0.67
DDX39A-220ENST00000593008 RIT2Q99578 217 aa10.84□□□□□ -0.67
DDX39A-220ENST00000593008 SH2D3AQ9BRG2 576 aa10.84□□□□□ -0.67
DDX39A-220ENST00000593008 HIPK3Q9H422 1215 aa10.84□□□□□ -0.67
DDX39A-220ENST00000593008 ATP6V1DQ9Y5K8 247 aa10.84□□□□□ -0.67
DDX39A-220ENST00000593008 SRPRBQ9Y5M8 271 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms