RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 KIAA1328Q86T90 577 aa15.76■□□□□ 0.11
RANBP3-229ENST00000592771 CATSPER3Q86XQ3 398 aa15.76■□□□□ 0.11
RANBP3-229ENST00000592771 KCTD17Q8N5Z5 321 aa15.76■□□□□ 0.11
RANBP3-229ENST00000592771 JAKMIP2Q96AA8 810 aa15.76■□□□□ 0.11
RANBP3-229ENST00000592771 UIMC1Q96RL1 719 aa15.76■□□□□ 0.11
RANBP3-229ENST00000592771 RHOXF2Q9BQY4 288 aa15.76■□□□□ 0.11
RANBP3-229ENST00000592771 WDR18Q9BV38 432 aa15.76■□□□□ 0.11
RANBP3-229ENST00000592771 EHMT1Q9H9B1 1298 aa15.76■□□□□ 0.11
RANBP3-229ENST00000592771 BMP2KQ9NSY1 1161 aaPredicted RBP15.76■□□□□ 0.11
RANBP3-229ENST00000592771 ZNF112Q9UJU3 913 aa15.76■□□□□ 0.11
RANBP3-229ENST00000592771 GJA3Q9Y6H8 435 aa15.76■□□□□ 0.11
RANBP3-229ENST00000592771 PITPNM2Q9BZ72 1349 aa15.76■□□□□ 0.11
RANBP3-229ENST00000592771 PARP14Q460N5 1801 aa15.76■□□□□ 0.11
RANBP3-229ENST00000592771 IDEP14735 1019 aa15.76■□□□□ 0.11
RANBP3-229ENST00000592771 CYP11B2P19099 503 aa15.76■□□□□ 0.11
RANBP3-229ENST00000592771 ZNF76P36508 570 aa15.76■□□□□ 0.11
RANBP3-229ENST00000592771 NCAPH2Q6IBW4 605 aa15.76■□□□□ 0.11
RANBP3-229ENST00000592771 ARHGAP27Q6ZUM4 889 aa15.76■□□□□ 0.11
RANBP3-229ENST00000592771 PRPF38AQ8NAV1 312 aaKnown RBP15.76■□□□□ 0.11
RANBP3-229ENST00000592771 POLR3CQ9BUI4 534 aaPredicted RBP15.76■□□□□ 0.11
RANBP3-229ENST00000592771 PCDHA2Q9Y5H9 948 aa15.76■□□□□ 0.11
RANBP3-229ENST00000592771 POTEFA5A3E0 1075 aa15.75■□□□□ 0.11
RANBP3-229ENST00000592771 RPS6KA5O75582 802 aa15.75■□□□□ 0.11
RANBP3-229ENST00000592771 POTEIP0CG38 1075 aa15.75■□□□□ 0.11
RANBP3-229ENST00000592771 AARSP49588 968 aaKnown RBP eCLIP15.75■□□□□ 0.11
RANBP3-229ENST00000592771 LRRC63Q05C16 580 aa15.75■□□□□ 0.11
RANBP3-229ENST00000592771 ITIH3Q06033 890 aa15.75■□□□□ 0.11
RANBP3-229ENST00000592771 POTEGQ6S5H5 508 aa15.75■□□□□ 0.11
RANBP3-229ENST00000592771 POTEEQ6S8J3 1075 aa15.75■□□□□ 0.11
RANBP3-229ENST00000592771 SLC5A5Q92911 643 aa15.75■□□□□ 0.11
RANBP3-229ENST00000592771 CNOT6LQ96LI5 555 aaKnown RBP15.75■□□□□ 0.11
RANBP3-229ENST00000592771 NHEJ1Q9H9Q4 299 aaPredicted RBP15.75■□□□□ 0.11
RANBP3-229ENST00000592771 PANK4Q9NVE7 773 aa15.75■□□□□ 0.11
RANBP3-229ENST00000592771 B4DLN1 442 aa15.74■□□□□ 0.11
RANBP3-229ENST00000592771 PES1O00541 588 aaKnown RBP15.74■□□□□ 0.11
RANBP3-229ENST00000592771 PSMD10O75832 226 aa15.74■□□□□ 0.11
RANBP3-229ENST00000592771 IVLP07476 585 aa15.74■□□□□ 0.11
RANBP3-229ENST00000592771 PRLRP16471 622 aa15.74■□□□□ 0.11
RANBP3-229ENST00000592771 ACTN2P35609 894 aa15.74■□□□□ 0.11
RANBP3-229ENST00000592771 ZCWPW2Q504Y3 356 aa15.74■□□□□ 0.11
RANBP3-229ENST00000592771 ARSHQ5FYA8 562 aa15.74■□□□□ 0.11
RANBP3-229ENST00000592771 FAM26FQ5R3K3 315 aa15.74■□□□□ 0.11
RANBP3-229ENST00000592771 NBPF12Q5TAG4 269 aaPredicted RBP15.74■□□□□ 0.11
RANBP3-229ENST00000592771 DCAF15Q66K64 600 aa15.74■□□□□ 0.11
RANBP3-229ENST00000592771 GPBP1Q86WP2 473 aa15.74■□□□□ 0.11
RANBP3-229ENST00000592771 CCDC65Q8IXS2 484 aa15.74■□□□□ 0.11
RANBP3-229ENST00000592771 NOA1Q8NC60 698 aaKnown RBP15.74■□□□□ 0.11
RANBP3-229ENST00000592771 NEK11Q8NG66 645 aa15.74■□□□□ 0.11
RANBP3-229ENST00000592771 NOC4LQ9BVI4 516 aaKnown RBP15.74■□□□□ 0.11
RANBP3-229ENST00000592771 SLC38A10Q9HBR0 1119 aa15.74■□□□□ 0.11
RANBP3-229ENST00000592771 RPTORQ8N122 1335 aa15.74■□□□□ 0.11
RANBP3-229ENST00000592771 MTIF2P46199 727 aaKnown RBP15.74■□□□□ 0.11
RANBP3-229ENST00000592771 VAV2P52735 878 aa15.74■□□□□ 0.11
RANBP3-229ENST00000592771 KIF5AQ12840 1032 aa15.74■□□□□ 0.11
RANBP3-229ENST00000592771 PPP2R5CQ13362 524 aa15.74■□□□□ 0.11
RANBP3-229ENST00000592771 ZSCAN26Q16670 478 aa15.74■□□□□ 0.11
RANBP3-229ENST00000592771 CEP55Q53EZ4 464 aa15.74■□□□□ 0.11
RANBP3-229ENST00000592771 CCDC70Q6NSX1 233 aa15.74■□□□□ 0.11
RANBP3-229ENST00000592771 APOBEC3FQ8IUX4 373 aaKnown RBP15.74■□□□□ 0.11
RANBP3-229ENST00000592771 SYT2Q8N9I0 419 aaPredicted RBP15.74■□□□□ 0.11
RANBP3-229ENST00000592771 GLIS3Q8NEA6 775 aa15.74■□□□□ 0.11
RANBP3-229ENST00000592771 CLEC4DQ8WXI8 215 aa15.74■□□□□ 0.11
RANBP3-229ENST00000592771 AGBL1Q96MI9 1066 aa15.74■□□□□ 0.11
RANBP3-229ENST00000592771 EDEM3Q9BZQ6 932 aa15.74■□□□□ 0.11
RANBP3-229ENST00000592771 CCPG1Q9ULG6 757 aa15.74■□□□□ 0.11
RANBP3-229ENST00000592771 RABGAP1Q9Y3P9 1069 aa15.74■□□□□ 0.11
RANBP3-229ENST00000592771 EML1O00423 815 aa15.73■□□□□ 0.11
RANBP3-229ENST00000592771 MEIS1O00470 390 aa15.73■□□□□ 0.11
RANBP3-229ENST00000592771 USO1O60763 962 aaKnown RBP15.73■□□□□ 0.11
RANBP3-229ENST00000592771 SSBP05455 408 aaKnown RBP eCLIP15.73■□□□□ 0.11
RANBP3-229ENST00000592771 SPA17Q15506 151 aa15.73■□□□□ 0.11
RANBP3-229ENST00000592771 MIIPQ5JXC2 388 aa15.73■□□□□ 0.11
RANBP3-229ENST00000592771 LRRC55Q6ZSA7 311 aa15.73■□□□□ 0.11
RANBP3-229ENST00000592771 OTOP1Q7RTM1 612 aa15.73■□□□□ 0.11
RANBP3-229ENST00000592771 ZNF572Q7Z3I7 529 aaPredicted RBP15.73■□□□□ 0.11
RANBP3-229ENST00000592771 MYOCDQ8IZQ8 938 aa15.73■□□□□ 0.11
RANBP3-229ENST00000592771 TRIM58Q8NG06 486 aa15.73■□□□□ 0.11
RANBP3-229ENST00000592771 EMILIN3Q9NT22 766 aa15.73■□□□□ 0.11
RANBP3-229ENST00000592771 VPS18Q9P253 973 aa15.73■□□□□ 0.11
RANBP3-229ENST00000592771 PLAGL2Q9UPG8 496 aa15.73■□□□□ 0.11
RANBP3-229ENST00000592771 DNM3Q9UQ16 869 aa15.73■□□□□ 0.11
RANBP3-229ENST00000592771 RASSF10A6NK89 507 aa15.72■□□□□ 0.11
RANBP3-229ENST00000592771 ATP1A1P05023 1023 aaKnown RBP15.72■□□□□ 0.11
RANBP3-229ENST00000592771 PSMC6P62333 389 aa15.72■□□□□ 0.11
RANBP3-229ENST00000592771 SETQ01105 290 aaPredicted RBP15.72■□□□□ 0.11
RANBP3-229ENST00000592771 B3GNT9Q6UX72 402 aa15.72■□□□□ 0.11
RANBP3-229ENST00000592771 LEKR1Q6ZMV7 388 aa15.72■□□□□ 0.11
RANBP3-229ENST00000592771 SCYL3Q8IZE3 742 aa15.72■□□□□ 0.11
RANBP3-229ENST00000592771 SAMD3Q8N6K7 520 aa15.72■□□□□ 0.11
RANBP3-229ENST00000592771 HOOK2Q96ED9 719 aa15.72■□□□□ 0.11
RANBP3-229ENST00000592771 HSD17B14Q9BPX1 270 aa15.72■□□□□ 0.11
RANBP3-229ENST00000592771 EIF2AK1Q9BQI3 630 aaKnown RBP15.72■□□□□ 0.11
RANBP3-229ENST00000592771 AGPAT5Q9NUQ2 364 aa15.72■□□□□ 0.11
RANBP3-229ENST00000592771 PPP1R9AQ9ULJ8 1098 aa15.72■□□□□ 0.11
RANBP3-229ENST00000592771 PHIPQ8WWQ0 1821 aa15.72■□□□□ 0.11
RANBP3-229ENST00000592771 RLFQ13129 1914 aa15.72■□□□□ 0.11
RANBP3-229ENST00000592771 LCA5LO95447 670 aa15.72■□□□□ 0.11
RANBP3-229ENST00000592771 VCAM1P19320 739 aa15.72■□□□□ 0.11
RANBP3-229ENST00000592771 LMAN1P49257 510 aa15.72■□□□□ 0.11
RANBP3-229ENST00000592771 SECISBP2LQ93073 1101 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms