RNA–Protein interactions for RNA: ENST00000592013.1

TNFRSF11A-204, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 2

Gene TNFRSF11A, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-204ENST00000592013 SETQ01105 290 aaPredicted RBP22.48■■□□□ 1.19
TNFRSF11A-204ENST00000592013 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.48■■□□□ 1.19
TNFRSF11A-204ENST00000592013 FBXO22Q8NEZ5 403 aa22.48■■□□□ 1.19
TNFRSF11A-204ENST00000592013 CCDC148Q8NFR7 591 aa22.48■■□□□ 1.19
TNFRSF11A-204ENST00000592013 KCNB2Q92953 911 aa22.48■■□□□ 1.19
TNFRSF11A-204ENST00000592013 UHRF1Q96T88 793 aaPredicted RBP22.48■■□□□ 1.19
TNFRSF11A-204ENST00000592013 RNF216Q9NWF9 866 aaPredicted RBP22.48■■□□□ 1.19
TNFRSF11A-204ENST00000592013 CHD7Q9P2D1 2997 aa22.48■■□□□ 1.19
TNFRSF11A-204ENST00000592013 KAT6AQ92794 2004 aa22.48■■□□□ 1.19
TNFRSF11A-204ENST00000592013 LCHNA4D1U4 455 aa22.47■■□□□ 1.19
TNFRSF11A-204ENST00000592013 MEIS1O00470 390 aa22.47■■□□□ 1.19
TNFRSF11A-204ENST00000592013 ACTR2P61160 394 aa22.47■■□□□ 1.19
TNFRSF11A-204ENST00000592013 MKRN4PQ13434 485 aaPredicted RBP22.47■■□□□ 1.19
TNFRSF11A-204ENST00000592013 Q6ZUG5 572 aa22.47■■□□□ 1.19
TNFRSF11A-204ENST00000592013 SP7Q8TDD2 431 aaPredicted RBP22.47■■□□□ 1.19
TNFRSF11A-204ENST00000592013 FTHL17Q9BXU8 183 aa22.47■■□□□ 1.19
TNFRSF11A-204ENST00000592013 ODR4Q5SWX8 454 aa22.46■■□□□ 1.19
TNFRSF11A-204ENST00000592013 TMCO2Q7Z6W1 182 aaPredicted RBP22.46■■□□□ 1.19
TNFRSF11A-204ENST00000592013 REXO1Q8N1G1 1221 aaKnown RBP22.46■■□□□ 1.19
TNFRSF11A-204ENST00000592013 NME8Q8N427 588 aa22.46■■□□□ 1.19
TNFRSF11A-204ENST00000592013 BRF1Q92994 677 aa22.46■■□□□ 1.19
TNFRSF11A-204ENST00000592013 SUGCTQ9HAC7 445 aa22.46■■□□□ 1.19
TNFRSF11A-204ENST00000592013 AGO4Q9HCK5 861 aaKnown RBP22.46■■□□□ 1.19
TNFRSF11A-204ENST00000592013 MTUS1Q9ULD2 1270 aa22.46■■□□□ 1.19
TNFRSF11A-204ENST00000592013 TRANK1O15050 2925 aa22.46■■□□□ 1.19
TNFRSF11A-204ENST00000592013 EPOPA6NHQ4 379 aa22.45■■□□□ 1.18
TNFRSF11A-204ENST00000592013 PRPF3O43395 683 aaKnown RBP22.45■■□□□ 1.18
TNFRSF11A-204ENST00000592013 NEFLP07196 543 aa22.45■■□□□ 1.18
TNFRSF11A-204ENST00000592013 CLK2P49760 499 aaKnown RBP22.45■■□□□ 1.18
TNFRSF11A-204ENST00000592013 MRPS6P82932 125 aaKnown RBP22.45■■□□□ 1.18
TNFRSF11A-204ENST00000592013 COL9A3Q14050 684 aaPredicted RBP22.45■■□□□ 1.18
TNFRSF11A-204ENST00000592013 MIS18BP1Q6P0N0 1132 aa22.45■■□□□ 1.18
TNFRSF11A-204ENST00000592013 TSHZ1Q6ZSZ6 1077 aa22.45■■□□□ 1.18
TNFRSF11A-204ENST00000592013 IL17RAQ96F46 866 aa22.45■■□□□ 1.18
TNFRSF11A-204ENST00000592013 ZMYND12Q9H0C1 365 aa22.45■■□□□ 1.18
TNFRSF11A-204ENST00000592013 TBC1D22BQ9NU19 505 aa22.45■■□□□ 1.18
TNFRSF11A-204ENST00000592013 NID2Q14112 1375 aa22.45■■□□□ 1.18
TNFRSF11A-204ENST00000592013 COL4A6Q14031 1691 aa22.45■■□□□ 1.18
TNFRSF11A-204ENST00000592013 DOCK5Q9H7D0 1870 aa22.45■■□□□ 1.18
TNFRSF11A-204ENST00000592013 POTEB3A0JP26 581 aa22.44■■□□□ 1.18
TNFRSF11A-204ENST00000592013 BACH1O14867 736 aa22.44■■□□□ 1.18
TNFRSF11A-204ENST00000592013 ARHGEF15O94989 841 aa22.44■■□□□ 1.18
TNFRSF11A-204ENST00000592013 UPP2O95045 317 aa22.44■■□□□ 1.18
TNFRSF11A-204ENST00000592013 CHRNA1P02708 482 aa22.44■■□□□ 1.18
TNFRSF11A-204ENST00000592013 CYP3A4P08684 503 aa22.44■■□□□ 1.18
TNFRSF11A-204ENST00000592013 INSRRP14616 1297 aa22.44■■□□□ 1.18
TNFRSF11A-204ENST00000592013 RPS6KB1P23443 525 aa22.44■■□□□ 1.18
TNFRSF11A-204ENST00000592013 IGBP1P78318 339 aa22.44■■□□□ 1.18
TNFRSF11A-204ENST00000592013 TCTN1Q2MV58 587 aa22.44■■□□□ 1.18
TNFRSF11A-204ENST00000592013 POTEBQ6S5H4 581 aa22.44■■□□□ 1.18
TNFRSF11A-204ENST00000592013 MICAL3Q7RTP6 2002 aa22.44■■□□□ 1.18
TNFRSF11A-204ENST00000592013 TRIM22Q8IYM9 498 aa22.44■■□□□ 1.18
TNFRSF11A-204ENST00000592013 GDPD5Q8WTR4 605 aa22.44■■□□□ 1.18
TNFRSF11A-204ENST00000592013 DNAJB3Q8WWF6 145 aa22.44■■□□□ 1.18
TNFRSF11A-204ENST00000592013 RNF26Q9BY78 433 aaPredicted RBP22.44■■□□□ 1.18
TNFRSF11A-204ENST00000592013 PCDHA2Q9Y5H9 948 aa22.44■■□□□ 1.18
TNFRSF11A-204ENST00000592013 SNX14Q9Y5W7 946 aa22.44■■□□□ 1.18
TNFRSF11A-204ENST00000592013 PTPRSQ13332 1948 aa22.43■■□□□ 1.18
TNFRSF11A-204ENST00000592013 LPXNO60711 386 aa22.43■■□□□ 1.18
TNFRSF11A-204ENST00000592013 GHRP10912 638 aa22.43■■□□□ 1.18
TNFRSF11A-204ENST00000592013 CDC27P30260 824 aa22.43■■□□□ 1.18
TNFRSF11A-204ENST00000592013 ADD1P35611 737 aaKnown RBP22.43■■□□□ 1.18
TNFRSF11A-204ENST00000592013 APOBRQ0VD83 1088 aa22.43■■□□□ 1.18
TNFRSF11A-204ENST00000592013 TIGD5Q53EQ6 642 aa22.43■■□□□ 1.18
TNFRSF11A-204ENST00000592013 TYW1BQ6NUM6 668 aa22.43■■□□□ 1.18
TNFRSF11A-204ENST00000592013 PLA2G4DQ86XP0 818 aa22.43■■□□□ 1.18
TNFRSF11A-204ENST00000592013 SMAP1Q8IYB5 467 aaPredicted RBP22.43■■□□□ 1.18
TNFRSF11A-204ENST00000592013 FIBCD1Q8N539 461 aa22.43■■□□□ 1.18
TNFRSF11A-204ENST00000592013 C22orf23Q9BZE7 217 aa22.43■■□□□ 1.18
TNFRSF11A-204ENST00000592013 FAM217BQ9NTX9 383 aaPredicted RBP22.43■■□□□ 1.18
TNFRSF11A-204ENST00000592013 VCANP13611 3396 aa22.42■■□□□ 1.18
TNFRSF11A-204ENST00000592013 COL1A2P08123 1366 aa22.42■■□□□ 1.18
TNFRSF11A-204ENST00000592013 IPO5O00410 1097 aaKnown RBP22.42■■□□□ 1.18
TNFRSF11A-204ENST00000592013 HBP1O60381 514 aa22.42■■□□□ 1.18
TNFRSF11A-204ENST00000592013 ATG7O95352 703 aa22.42■■□□□ 1.18
TNFRSF11A-204ENST00000592013 ARP10275 920 aa22.42■■□□□ 1.18
TNFRSF11A-204ENST00000592013 FBXO47Q5MNV8 452 aa22.42■■□□□ 1.18
TNFRSF11A-204ENST00000592013 CPLX2Q6PUV4 134 aaKnown RBP22.42■■□□□ 1.18
TNFRSF11A-204ENST00000592013 RUFY4Q6ZNE9 571 aa22.42■■□□□ 1.18
TNFRSF11A-204ENST00000592013 FAM177A1Q8N128 213 aaPredicted RBP22.42■■□□□ 1.18
TNFRSF11A-204ENST00000592013 MRPL38Q96DV4 380 aaKnown RBP22.42■■□□□ 1.18
TNFRSF11A-204ENST00000592013 AGXT2Q9BYV1 514 aa22.42■■□□□ 1.18
TNFRSF11A-204ENST00000592013 CDY2AQ9Y6F7 541 aa22.42■■□□□ 1.18
TNFRSF11A-204ENST00000592013 SIP14410 1827 aa22.41■■□□□ 1.18
TNFRSF11A-204ENST00000592013 SMIM35A0A1B0GVV1 85 aa22.41■■□□□ 1.18
TNFRSF11A-204ENST00000592013 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.41■■□□□ 1.18
TNFRSF11A-204ENST00000592013 RB1P06400 928 aa22.41■■□□□ 1.18
TNFRSF11A-204ENST00000592013 BMP1P13497 986 aa22.41■■□□□ 1.18
TNFRSF11A-204ENST00000592013 KRT76Q01546 638 aa22.41■■□□□ 1.18
TNFRSF11A-204ENST00000592013 MGAT3Q09327 533 aa22.41■■□□□ 1.18
TNFRSF11A-204ENST00000592013 LPIN1Q14693 890 aa22.41■■□□□ 1.18
TNFRSF11A-204ENST00000592013 PLCB4Q15147 1175 aa22.41■■□□□ 1.18
TNFRSF11A-204ENST00000592013 EPC2Q52LR7 807 aa22.41■■□□□ 1.18
TNFRSF11A-204ENST00000592013 ZNF484Q5JVG2 852 aa22.41■■□□□ 1.18
TNFRSF11A-204ENST00000592013 MARCH8Q5T0T0 291 aa22.41■■□□□ 1.18
TNFRSF11A-204ENST00000592013 JAKMIP3Q5VZ66 844 aa22.41■■□□□ 1.18
TNFRSF11A-204ENST00000592013 ZNF710Q8N1W2 664 aa22.41■■□□□ 1.18
TNFRSF11A-204ENST00000592013 CYP2W1Q8TAV3 490 aa22.41■■□□□ 1.18
TNFRSF11A-204ENST00000592013 PGBD1Q96JS3 809 aa22.41■■□□□ 1.18
TNFRSF11A-204ENST00000592013 ZNF577Q9BSK1 485 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms