RNA–Protein interactions for RNA: ENST00000591893.1

H3F3B-211, Transcript of H3 histone family member 3B, humanhuman

Gene H3F3B, Length 2,787 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-211ENST00000591893 LRRC57Q8N9N7 239 aa19.39■□□□□ 0.69
H3F3B-211ENST00000591893 CCDC26Q8TAB7 109 aa19.39■□□□□ 0.69
H3F3B-211ENST00000591893 THOC1Q96FV9 657 aaKnown RBP19.39■□□□□ 0.69
H3F3B-211ENST00000591893 TRAF5O00463 557 aa19.38■□□□□ 0.69
H3F3B-211ENST00000591893 ASAP2O43150 1006 aa19.38■□□□□ 0.69
H3F3B-211ENST00000591893 ITIH4Q14624 930 aa19.38■□□□□ 0.69
H3F3B-211ENST00000591893 DZIP3Q86Y13 1208 aaKnown RBP19.38■□□□□ 0.69
H3F3B-211ENST00000591893 FAM114A2Q9NRY5 505 aa19.38■□□□□ 0.69
H3F3B-211ENST00000591893 C15orf41Q9Y2V0 281 aa19.38■□□□□ 0.69
H3F3B-211ENST00000591893 SHANK3Q9BYB0 1731 aa19.38■□□□□ 0.69
H3F3B-211ENST00000591893 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.38■□□□□ 0.69
H3F3B-211ENST00000591893 ERVV-1B6SEH8 477 aa19.38■□□□□ 0.69
H3F3B-211ENST00000591893 KIF3CO14782 793 aa19.38■□□□□ 0.69
H3F3B-211ENST00000591893 CAND2O75155 1236 aa19.38■□□□□ 0.69
H3F3B-211ENST00000591893 SKAP2O75563 359 aaPredicted RBP19.38■□□□□ 0.69
H3F3B-211ENST00000591893 MMEP08473 750 aa19.38■□□□□ 0.69
H3F3B-211ENST00000591893 ZBTB48P10074 688 aaPredicted RBP19.38■□□□□ 0.69
H3F3B-211ENST00000591893 CHN1P15882 459 aa19.38■□□□□ 0.69
H3F3B-211ENST00000591893 CALRP27797 417 aaKnown RBP19.38■□□□□ 0.69
H3F3B-211ENST00000591893 ZKSCAN8Q15776 578 aaPredicted RBP19.38■□□□□ 0.69
H3F3B-211ENST00000591893 FOXR2Q6PJQ5 311 aa19.38■□□□□ 0.69
H3F3B-211ENST00000591893 CCHCR1Q8TD31 782 aa19.38■□□□□ 0.69
H3F3B-211ENST00000591893 SEC14L1Q92503 715 aa19.38■□□□□ 0.69
H3F3B-211ENST00000591893 DPH5Q9H2P9 285 aa19.38■□□□□ 0.69
H3F3B-211ENST00000591893 SLIT2O94813 1529 aa19.38■□□□□ 0.69
H3F3B-211ENST00000591893 C10orf76Q5T2E6 689 aa19.38■□□□□ 0.69
H3F3B-211ENST00000591893 PIGWQ7Z7B1 504 aa19.38■□□□□ 0.69
H3F3B-211ENST00000591893 NEK8Q86SG6 692 aa19.38■□□□□ 0.69
H3F3B-211ENST00000591893 TBC1D1Q86TI0 1168 aaPredicted RBP19.38■□□□□ 0.69
H3F3B-211ENST00000591893 CDK5RAP3Q96JB5 506 aa19.38■□□□□ 0.69
H3F3B-211ENST00000591893 PNMA5Q96PV4 448 aa19.38■□□□□ 0.69
H3F3B-211ENST00000591893 ATP8A1Q9Y2Q0 1164 aa19.38■□□□□ 0.69
H3F3B-211ENST00000591893 UTP11Q9Y3A2 253 aaKnown RBP19.38■□□□□ 0.69
H3F3B-211ENST00000591893 LAMB1P07942 1786 aa19.37■□□□□ 0.69
H3F3B-211ENST00000591893 CFAP73A6NFT4 308 aa19.37■□□□□ 0.69
H3F3B-211ENST00000591893 ANP32DO95626 131 aa19.37■□□□□ 0.69
H3F3B-211ENST00000591893 CYP19A1P11511 503 aaPredicted RBP19.37■□□□□ 0.69
H3F3B-211ENST00000591893 TXKP42681 527 aa19.37■□□□□ 0.69
H3F3B-211ENST00000591893 SF3A3Q12874 501 aaKnown RBP eCLIP19.37■□□□□ 0.69
H3F3B-211ENST00000591893 PSMD2Q13200 908 aa19.37■□□□□ 0.69
H3F3B-211ENST00000591893 CCDC152Q4G0S7 254 aa19.37■□□□□ 0.69
H3F3B-211ENST00000591893 SUSD4Q5VX71 490 aa19.37■□□□□ 0.69
H3F3B-211ENST00000591893 CHADLQ6NUI6 762 aa19.37■□□□□ 0.69
H3F3B-211ENST00000591893 HOOK3Q86VS8 718 aa19.37■□□□□ 0.69
H3F3B-211ENST00000591893 DGKHQ86XP1 1220 aa19.37■□□□□ 0.69
H3F3B-211ENST00000591893 MYOCDQ8IZQ8 938 aa19.37■□□□□ 0.69
H3F3B-211ENST00000591893 CELF4Q9BZC1 486 aaKnown RBP19.37■□□□□ 0.69
H3F3B-211ENST00000591893 L3MBTL1Q9Y468 752 aa19.37■□□□□ 0.69
H3F3B-211ENST00000591893 COL5A2P05997 1499 aaPredicted RBP19.37■□□□□ 0.69
H3F3B-211ENST00000591893 PPFIA2O75334 1257 aa19.37■□□□□ 0.69
H3F3B-211ENST00000591893 KCNQ4P56696 695 aa19.37■□□□□ 0.69
H3F3B-211ENST00000591893 TFAP4Q01664 338 aa19.37■□□□□ 0.69
H3F3B-211ENST00000591893 ZCWPW2Q504Y3 356 aa19.37■□□□□ 0.69
H3F3B-211ENST00000591893 CRNKL1Q9BZJ0 848 aaKnown RBP19.37■□□□□ 0.69
H3F3B-211ENST00000591893 ZMYND12Q9H0C1 365 aa19.37■□□□□ 0.69
H3F3B-211ENST00000591893 IL17RBQ9NRM6 502 aa19.37■□□□□ 0.69
H3F3B-211ENST00000591893 CCNHP51946 323 aaPredicted RBP19.36■□□□□ 0.69
H3F3B-211ENST00000591893 PTK2Q05397 1052 aa19.36■□□□□ 0.69
H3F3B-211ENST00000591893 RASGEF1CQ8N431 466 aa19.36■□□□□ 0.69
H3F3B-211ENST00000591893 DDX12PQ92771 950 aa19.36■□□□□ 0.69
H3F3B-211ENST00000591893 SELENOSQ9BQE4 189 aa19.36■□□□□ 0.69
H3F3B-211ENST00000591893 KANSL2Q9H9L4 492 aa19.36■□□□□ 0.69
H3F3B-211ENST00000591893 ARPP21Q9UBL0 812 aaPredicted RBP19.36■□□□□ 0.69
H3F3B-211ENST00000591893 MTMR7Q9Y216 660 aa19.36■□□□□ 0.69
H3F3B-211ENST00000591893 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.36■□□□□ 0.69
H3F3B-211ENST00000591893 HOXA7P31268 230 aaPredicted RBP19.36■□□□□ 0.69
H3F3B-211ENST00000591893 NAPAP54920 295 aa19.36■□□□□ 0.69
H3F3B-211ENST00000591893 GRIK3Q13003 919 aa19.36■□□□□ 0.69
H3F3B-211ENST00000591893 PEX26Q7Z412 305 aa19.36■□□□□ 0.69
H3F3B-211ENST00000591893 ATXN2LQ8WWM7 1075 aaKnown RBP19.36■□□□□ 0.69
H3F3B-211ENST00000591893 FMO2Q99518 471 aa19.36■□□□□ 0.69
H3F3B-211ENST00000591893 SAMD15Q9P1V8 674 aa19.36■□□□□ 0.69
H3F3B-211ENST00000591893 FAM133BQ5BKY9 247 aaKnown RBP19.35■□□□□ 0.69
H3F3B-211ENST00000591893 SPDYCQ5MJ68 293 aa19.35■□□□□ 0.69
H3F3B-211ENST00000591893 TRPM8Q7Z2W7 1104 aa19.35■□□□□ 0.69
H3F3B-211ENST00000591893 LRRC34Q8IZ02 419 aa19.35■□□□□ 0.69
H3F3B-211ENST00000591893 TPCN2Q8NHX9 752 aa19.35■□□□□ 0.69
H3F3B-211ENST00000591893 GANQ9H2C0 597 aa19.35■□□□□ 0.69
H3F3B-211ENST00000591893 ATP8A2Q9NTI2 1148 aa19.35■□□□□ 0.69
H3F3B-211ENST00000591893 DNAAF5Q86Y56 855 aa19.35■□□□□ 0.69
H3F3B-211ENST00000591893 TRIM59Q8IWR1 403 aa19.35■□□□□ 0.69
H3F3B-211ENST00000591893 RAD54LQ92698 747 aa19.35■□□□□ 0.69
H3F3B-211ENST00000591893 TXLNGYQ9BZA5 131 aa19.35■□□□□ 0.69
H3F3B-211ENST00000591893 TRIM31Q9BZY9 425 aa19.35■□□□□ 0.69
H3F3B-211ENST00000591893 UTRNP46939 3433 aa19.35■□□□□ 0.69
H3F3B-211ENST00000591893 MMP13P45452 471 aa19.34■□□□□ 0.69
H3F3B-211ENST00000591893 ZNF268Q14587 947 aaPredicted RBP19.34■□□□□ 0.69
H3F3B-211ENST00000591893 SLC4A8Q2Y0W8 1093 aa19.34■□□□□ 0.69
H3F3B-211ENST00000591893 SMIM5Q71RC9 77 aa19.34■□□□□ 0.69
H3F3B-211ENST00000591893 BZW1Q7L1Q6 419 aaKnown RBP19.34■□□□□ 0.69
H3F3B-211ENST00000591893 ZNF571Q7Z3V5 609 aaPredicted RBP19.34■□□□□ 0.69
H3F3B-211ENST00000591893 AGAP11Q8TF27 550 aa19.34■□□□□ 0.69
H3F3B-211ENST00000591893 CEP63Q96MT8 703 aa19.34■□□□□ 0.69
H3F3B-211ENST00000591893 SPAG5Q96R06 1193 aa19.34■□□□□ 0.69
H3F3B-211ENST00000591893 ELAC2Q9BQ52 826 aaKnown RBP19.34■□□□□ 0.69
H3F3B-211ENST00000591893 TRPC6Q9Y210 931 aa19.34■□□□□ 0.69
H3F3B-211ENST00000591893 GCKP35557 465 aa19.34■□□□□ 0.69
H3F3B-211ENST00000591893 SBK1Q52WX2 424 aa19.34■□□□□ 0.69
H3F3B-211ENST00000591893 CEP120Q8N960 986 aa19.34■□□□□ 0.69
H3F3B-211ENST00000591893 TBCKQ8TEA7 893 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms