RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 THPOP40225 353 aa11.39□□□□□ -0.59
BRCA1-227ENST00000591849 EPHB4P54760 987 aa11.39□□□□□ -0.59
BRCA1-227ENST00000591849 Q4G0T1 1027 aa11.39□□□□□ -0.59
BRCA1-227ENST00000591849 TMEM240Q5SV17 173 aa11.39□□□□□ -0.59
BRCA1-227ENST00000591849 LRCH2Q5VUJ6 765 aa11.39□□□□□ -0.59
BRCA1-227ENST00000591849 ZNF746Q6NUN9 644 aaPredicted RBP11.39□□□□□ -0.59
BRCA1-227ENST00000591849 PDXDC2PQ6P474 469 aa11.39□□□□□ -0.59
BRCA1-227ENST00000591849 LRRC8DQ7L1W4 858 aa11.39□□□□□ -0.59
BRCA1-227ENST00000591849 PLPPR4Q7Z2D5 763 aa11.39□□□□□ -0.59
BRCA1-227ENST00000591849 TRMT1LQ7Z2T5 733 aaKnown RBP11.39□□□□□ -0.59
BRCA1-227ENST00000591849 RSPH3Q86UC2 560 aa11.39□□□□□ -0.59
BRCA1-227ENST00000591849 DIS3L2Q8IYB7 885 aaKnown RBP11.39□□□□□ -0.59
BRCA1-227ENST00000591849 RIT2Q99578 217 aa11.39□□□□□ -0.59
BRCA1-227ENST00000591849 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.39□□□□□ -0.596e-6■■□□□ 12.9
BRCA1-227ENST00000591849 BACH2Q9BYV9 841 aa11.39□□□□□ -0.59
BRCA1-227ENST00000591849 WNT8AQ9H1J5 351 aa11.39□□□□□ -0.59
BRCA1-227ENST00000591849 PCDHA10Q9Y5I2 948 aa11.39□□□□□ -0.59
BRCA1-227ENST00000591849 KIAA1217Q5T5P2 1943 aa11.39□□□□□ -0.59
BRCA1-227ENST00000591849 CYP3A7-CYP3A51PA0A087WV96 503 aa11.38□□□□□ -0.59
BRCA1-227ENST00000591849 POTEB3A0JP26 581 aa11.38□□□□□ -0.59
BRCA1-227ENST00000591849 WDR64B1ANS9 1081 aa11.38□□□□□ -0.59
BRCA1-227ENST00000591849 BTBD18B2RXH4 712 aa11.38□□□□□ -0.59
BRCA1-227ENST00000591849 M0R2N6 131 aa11.38□□□□□ -0.59
BRCA1-227ENST00000591849 LGR5O75473 907 aa11.38□□□□□ -0.59
BRCA1-227ENST00000591849 PARNO95453 639 aaKnown RBP11.38□□□□□ -0.59
BRCA1-227ENST00000591849 CCNE2O96020 404 aa11.38□□□□□ -0.59
BRCA1-227ENST00000591849 PFKMP08237 780 aa11.38□□□□□ -0.59
BRCA1-227ENST00000591849 CKBP12277 381 aa11.38□□□□□ -0.59
BRCA1-227ENST00000591849 ATP2B1P20020 1258 aa11.38□□□□□ -0.59
BRCA1-227ENST00000591849 CYP3A7P24462 503 aa11.38□□□□□ -0.59
BRCA1-227ENST00000591849 SLC26A2P50443 739 aa11.38□□□□□ -0.59
BRCA1-227ENST00000591849 NR5A1Q13285 461 aa11.38□□□□□ -0.59
BRCA1-227ENST00000591849 NPY5RQ15761 445 aa11.38□□□□□ -0.59
BRCA1-227ENST00000591849 GRIK4Q16099 956 aa11.38□□□□□ -0.59
BRCA1-227ENST00000591849 POTEBQ6S5H4 581 aa11.38□□□□□ -0.59
BRCA1-227ENST00000591849 MOXD1Q6UVY6 613 aa11.38□□□□□ -0.59
BRCA1-227ENST00000591849 ABHD15Q6UXT9 468 aa11.38□□□□□ -0.59
BRCA1-227ENST00000591849 OTOP2Q7RTS6 562 aa11.38□□□□□ -0.59
BRCA1-227ENST00000591849 MIER3Q7Z3K6 550 aa11.38□□□□□ -0.59
BRCA1-227ENST00000591849 SMAP1Q8IYB5 467 aaPredicted RBP11.38□□□□□ -0.59
BRCA1-227ENST00000591849 EMSYQ7Z589 1322 aa11.37□□□□□ -0.59
BRCA1-227ENST00000591849 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.37□□□□□ -0.59
BRCA1-227ENST00000591849 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.37□□□□□ -0.59
BRCA1-227ENST00000591849 RSPH10B2B2RC85 870 aa11.37□□□□□ -0.59
BRCA1-227ENST00000591849 DHX15O43143 795 aaKnown RBP11.37□□□□□ -0.59
BRCA1-227ENST00000591849 HBP1O60381 514 aa11.37□□□□□ -0.59
BRCA1-227ENST00000591849 ATG7O95352 703 aa11.37□□□□□ -0.59
BRCA1-227ENST00000591849 RSPH10BP0C881 870 aa11.37□□□□□ -0.59
BRCA1-227ENST00000591849 INSRRP14616 1297 aa11.37□□□□□ -0.59
BRCA1-227ENST00000591849 SFNP31947 248 aa11.37□□□□□ -0.59
BRCA1-227ENST00000591849 JAK3P52333 1124 aa11.37□□□□□ -0.59
BRCA1-227ENST00000591849 ST3GAL1Q11201 340 aa11.37□□□□□ -0.59
BRCA1-227ENST00000591849 PLCB4Q15147 1175 aa11.37□□□□□ -0.59
BRCA1-227ENST00000591849 ZNF618Q5T7W0 954 aa11.37□□□□□ -0.59
BRCA1-227ENST00000591849 C16orf59Q7L2K0 433 aa11.37□□□□□ -0.59
BRCA1-227ENST00000591849 SERINC5Q86VE9 423 aa11.37□□□□□ -0.59
BRCA1-227ENST00000591849 DEFB123Q8N688 67 aa11.37□□□□□ -0.59
BRCA1-227ENST00000591849 LMBR1Q8WVP7 490 aa11.37□□□□□ -0.59
BRCA1-227ENST00000591849 DHX38Q92620 1227 aaKnown RBP11.37□□□□□ -0.59
BRCA1-227ENST00000591849 SLC5A5Q92911 643 aa11.37□□□□□ -0.59
BRCA1-227ENST00000591849 TMX3Q96JJ7 454 aa11.37□□□□□ -0.59
BRCA1-227ENST00000591849 PCYT2Q99447 389 aa11.37□□□□□ -0.59
BRCA1-227ENST00000591849 DISC1Q9NRI5 854 aa11.37□□□□□ -0.59
BRCA1-227ENST00000591849 NRBP2Q9NSY0 501 aa11.37□□□□□ -0.59
BRCA1-227ENST00000591849 GABBR1Q9UBS5 961 aa11.37□□□□□ -0.59
BRCA1-227ENST00000591849 SMC3Q9UQE7 1217 aa11.37□□□□□ -0.59
BRCA1-227ENST00000591849 SLC4A7Q9Y6M7 1214 aa11.37□□□□□ -0.59
BRCA1-227ENST00000591849 H3BQV1 296 aa11.36□□□□□ -0.59
BRCA1-227ENST00000591849 M0QZ92 97 aa11.36□□□□□ -0.59
BRCA1-227ENST00000591849 DLL1O00548 723 aa11.36□□□□□ -0.59
BRCA1-227ENST00000591849 CTSHP09668 335 aa11.36□□□□□ -0.59
BRCA1-227ENST00000591849 HIC1Q14526 733 aa11.36□□□□□ -0.59
BRCA1-227ENST00000591849 ZNF484Q5JVG2 852 aa11.36□□□□□ -0.59
BRCA1-227ENST00000591849 PPP4R3AQ6IN85 833 aa11.36□□□□□ -0.59
BRCA1-227ENST00000591849 TAF2Q6P1X5 1199 aa11.36□□□□□ -0.59
BRCA1-227ENST00000591849 CCDC60Q8IWA6 550 aaPredicted RBP11.36□□□□□ -0.59
BRCA1-227ENST00000591849 SLFN12Q8IYM2 578 aa11.36□□□□□ -0.59
BRCA1-227ENST00000591849 ATP8B4Q8TF62 1192 aa11.36□□□□□ -0.59
BRCA1-227ENST00000591849 HERVK_113Q902F9 699 aa11.36□□□□□ -0.59
BRCA1-227ENST00000591849 GJA10Q969M2 543 aa11.36□□□□□ -0.59
BRCA1-227ENST00000591849 LENG9Q96B70 501 aa11.36□□□□□ -0.59
BRCA1-227ENST00000591849 FAM167AQ96KS9 214 aa11.36□□□□□ -0.59
BRCA1-227ENST00000591849 FAM20AQ96MK3 541 aa11.36□□□□□ -0.59
BRCA1-227ENST00000591849 FAM49AQ9H0Q0 323 aaPredicted RBP11.36□□□□□ -0.59
BRCA1-227ENST00000591849 UNC45AQ9H3U1 944 aa11.36□□□□□ -0.59
BRCA1-227ENST00000591849 TUBE1Q9UJT0 475 aa11.36□□□□□ -0.59
BRCA1-227ENST00000591849 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.36□□□□□ -0.59
BRCA1-227ENST00000591849 MYH7BA7E2Y1 1941 aa11.35□□□□□ -0.59
BRCA1-227ENST00000591849 SLC37A4O43826 429 aa11.35□□□□□ -0.59
BRCA1-227ENST00000591849 EDIL3O43854 480 aa11.35□□□□□ -0.59
BRCA1-227ENST00000591849 CAND2O75155 1236 aa11.35□□□□□ -0.59
BRCA1-227ENST00000591849 RPLP2P05387 115 aaKnown RBP11.35□□□□□ -0.59
BRCA1-227ENST00000591849 KCNJ6P48051 423 aa11.35□□□□□ -0.59
BRCA1-227ENST00000591849 SMAD3P84022 425 aaKnown RBP11.35□□□□□ -0.59
BRCA1-227ENST00000591849 MCTP1Q6DN14 999 aa11.35□□□□□ -0.59
BRCA1-227ENST00000591849 FBXO18Q8NFZ0 1043 aa11.35□□□□□ -0.59
BRCA1-227ENST00000591849 RDM1Q8NG50 284 aa11.35□□□□□ -0.59
BRCA1-227ENST00000591849 BBXQ8WY36 941 aaPredicted RBP11.35□□□□□ -0.59
BRCA1-227ENST00000591849 MBOAT7Q96N66 472 aa11.35□□□□□ -0.59
BRCA1-227ENST00000591849 CTAGE1Q96RT6 745 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms