RNA–Protein interactions for RNA: ENST00000591598.5

CTDP1-207, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best)

Gene CTDP1, Length 3,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-207ENST00000591598 MAEAQ7L5Y9 396 aa18.44■□□□□ 0.54
CTDP1-207ENST00000591598 SLFN12Q8IYM2 578 aa18.44■□□□□ 0.54
CTDP1-207ENST00000591598 ERMNQ8TAM6 284 aa18.44■□□□□ 0.54
CTDP1-207ENST00000591598 PRMT6Q96LA8 375 aaPredicted RBP18.44■□□□□ 0.54
CTDP1-207ENST00000591598 CEP72Q9P209 647 aa18.44■□□□□ 0.54
CTDP1-207ENST00000591598 BMP3P12645 472 aa18.44■□□□□ 0.54
CTDP1-207ENST00000591598 CASP4P49662 377 aa18.44■□□□□ 0.54
CTDP1-207ENST00000591598 SLC12A3P55017 1021 aa18.44■□□□□ 0.54
CTDP1-207ENST00000591598 RBM26Q5T8P6 1007 aaKnown RBP18.44■□□□□ 0.54
CTDP1-207ENST00000591598 ARMCX3Q9UH62 379 aaPredicted RBP18.44■□□□□ 0.54
CTDP1-207ENST00000591598 BCS1LQ9Y276 419 aa18.44■□□□□ 0.54
CTDP1-207ENST00000591598 SMCHD1A6NHR9 2005 aa18.44■□□□□ 0.54
CTDP1-207ENST00000591598 LY75O60449 1722 aa18.44■□□□□ 0.54
CTDP1-207ENST00000591598 A0A1W2PRG0 241 aa18.44■□□□□ 0.54
CTDP1-207ENST00000591598 TBCAO75347 108 aaKnown RBP18.44■□□□□ 0.54
CTDP1-207ENST00000591598 RRP1BQ14684 758 aaKnown RBP18.44■□□□□ 0.54
CTDP1-207ENST00000591598 GJB7Q6PEY0 223 aa18.44■□□□□ 0.54
CTDP1-207ENST00000591598 TRIM59Q8IWR1 403 aa18.44■□□□□ 0.54
CTDP1-207ENST00000591598 IFT81Q8WYA0 676 aa18.44■□□□□ 0.54
CTDP1-207ENST00000591598 RUSC1Q9BVN2 902 aa18.44■□□□□ 0.54
CTDP1-207ENST00000591598 RBM12Q9NTZ6 932 aaKnown RBP18.44■□□□□ 0.54
CTDP1-207ENST00000591598 MYH4Q9Y623 1939 aa18.43■□□□□ 0.54
CTDP1-207ENST00000591598 EML1O00423 815 aa18.43■□□□□ 0.54
CTDP1-207ENST00000591598 MSH4O15457 936 aa18.43■□□□□ 0.54
CTDP1-207ENST00000591598 GIT2Q14161 759 aa18.43■□□□□ 0.54
CTDP1-207ENST00000591598 ASIC2Q16515 512 aa18.43■□□□□ 0.54
CTDP1-207ENST00000591598 LEKR1Q6ZMV7 388 aa18.43■□□□□ 0.54
CTDP1-207ENST00000591598 TMEM179Q6ZVK1 233 aa18.43■□□□□ 0.54
CTDP1-207ENST00000591598 PROCA1Q8NCQ7 364 aaPredicted RBP18.43■□□□□ 0.54
CTDP1-207ENST00000591598 DCAF4Q8WV16 495 aa18.43■□□□□ 0.54
CTDP1-207ENST00000591598 TLR10Q9BXR5 811 aa18.43■□□□□ 0.54
CTDP1-207ENST00000591598 KCTD10Q9H3F6 313 aa18.43■□□□□ 0.54
CTDP1-207ENST00000591598 PCDHA2Q9Y5H9 948 aa18.43■□□□□ 0.54
CTDP1-207ENST00000591598 ZSCAN5CA6NGD5 496 aaPredicted RBP18.43■□□□□ 0.54
CTDP1-207ENST00000591598 DDX39AO00148 427 aaKnown RBP18.43■□□□□ 0.54
CTDP1-207ENST00000591598 CCNI2Q6ZMN8 369 aaPredicted RBP18.43■□□□□ 0.54
CTDP1-207ENST00000591598 ACER1Q8TDN7 264 aa18.43■□□□□ 0.54
CTDP1-207ENST00000591598 BBXQ8WY36 941 aaPredicted RBP18.43■□□□□ 0.54
CTDP1-207ENST00000591598 EXOC4Q96A65 974 aa18.43■□□□□ 0.54
CTDP1-207ENST00000591598 NYAP2Q9P242 653 aa18.43■□□□□ 0.54
CTDP1-207ENST00000591598 HPCAL4Q9UM19 191 aa18.43■□□□□ 0.54
CTDP1-207ENST00000591598 SERPING1P05155 500 aa18.42■□□□□ 0.54
CTDP1-207ENST00000591598 TUBBP07437 444 aa18.42■□□□□ 0.54
CTDP1-207ENST00000591598 SPATA31C1P0DKV0 1188 aa18.42■□□□□ 0.54
CTDP1-207ENST00000591598 DACT2Q5SW24 774 aa18.42■□□□□ 0.54
CTDP1-207ENST00000591598 ETNPPLQ8TBG4 499 aa18.42■□□□□ 0.54
CTDP1-207ENST00000591598 RPGRIP1Q96KN7 1286 aa18.42■□□□□ 0.54
CTDP1-207ENST00000591598 KLHDC7AQ5VTJ3 777 aa18.42■□□□□ 0.54
CTDP1-207ENST00000591598 C8orf74Q6P047 294 aa18.42■□□□□ 0.54
CTDP1-207ENST00000591598 MIGA2Q7L4E1 593 aa18.42■□□□□ 0.54
CTDP1-207ENST00000591598 UBR3Q6ZT12 1888 aa18.42■□□□□ 0.54
CTDP1-207ENST00000591598 MCM3P25205 808 aa18.42■□□□□ 0.54
CTDP1-207ENST00000591598 POLD1P28340 1107 aa18.42■□□□□ 0.54
CTDP1-207ENST00000591598 ZC2HC1CQ53FD0 456 aaPredicted RBP18.42■□□□□ 0.54
CTDP1-207ENST00000591598 ZNF662Q6ZS27 426 aa18.42■□□□□ 0.54
CTDP1-207ENST00000591598 RDH13Q8NBN7 331 aa18.42■□□□□ 0.54
CTDP1-207ENST00000591598 IQCDQ96DY2 449 aa18.42■□□□□ 0.54
CTDP1-207ENST00000591598 VEZTQ9HBM0 779 aa18.42■□□□□ 0.54
CTDP1-207ENST00000591598 TMCO5BA8MYB1 307 aa18.41■□□□□ 0.54
CTDP1-207ENST00000591598 H0YIN7 160 aa18.41■□□□□ 0.54
CTDP1-207ENST00000591598 ONECUT3O60422 494 aaPredicted RBP18.41■□□□□ 0.54
CTDP1-207ENST00000591598 XRCC5P13010 732 aaKnown RBP18.41■□□□□ 0.54
CTDP1-207ENST00000591598 TCP1P17987 556 aaKnown RBP18.41■□□□□ 0.54
CTDP1-207ENST00000591598 MYCT1Q8N699 235 aa18.41■□□□□ 0.54
CTDP1-207ENST00000591598 FAM71BQ8TC56 605 aa18.41■□□□□ 0.54
CTDP1-207ENST00000591598 CEP63Q96MT8 703 aa18.41■□□□□ 0.54
CTDP1-207ENST00000591598 EHD4Q9H223 541 aa18.41■□□□□ 0.54
CTDP1-207ENST00000591598 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.41■□□□□ 0.542e-7■■■■■ 107
CTDP1-207ENST00000591598 RABGAP1Q9Y3P9 1069 aa18.41■□□□□ 0.54
CTDP1-207ENST00000591598 THSD7AQ9UPZ6 1657 aa18.41■□□□□ 0.54
CTDP1-207ENST00000591598 AKAP3O75969 853 aa18.41■□□□□ 0.54
CTDP1-207ENST00000591598 NMT1P30419 496 aaKnown RBP18.41■□□□□ 0.54
CTDP1-207ENST00000591598 PTK2Q05397 1052 aa18.41■□□□□ 0.54
CTDP1-207ENST00000591598 KNOP1Q1ED39 458 aaKnown RBP18.41■□□□□ 0.54
CTDP1-207ENST00000591598 TBC1D10BQ4KMP7 808 aaPredicted RBP18.41■□□□□ 0.54
CTDP1-207ENST00000591598 STRIP1Q5VSL9 837 aa18.41■□□□□ 0.54
CTDP1-207ENST00000591598 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.41■□□□□ 0.54
CTDP1-207ENST00000591598 PRR12Q9ULL5 1215 aa18.41■□□□□ 0.54
CTDP1-207ENST00000591598 SPIRE1Q08AE8 756 aa18.4■□□□□ 0.54
CTDP1-207ENST00000591598 EXOC3L4Q17RC7 722 aa18.4■□□□□ 0.54
CTDP1-207ENST00000591598 ASTE1Q2TB18 679 aaPredicted RBP18.4■□□□□ 0.54
CTDP1-207ENST00000591598 TTC19Q6DKK2 380 aaPredicted RBP18.4■□□□□ 0.54
CTDP1-207ENST00000591598 FOXR1Q6PIV2 292 aa18.4■□□□□ 0.54
CTDP1-207ENST00000591598 LENG9Q96B70 501 aa18.4■□□□□ 0.54
CTDP1-207ENST00000591598 NAP1L4Q99733 375 aaKnown RBP18.4■□□□□ 0.54
CTDP1-207ENST00000591598 EIF2AK1Q9BQI3 630 aaKnown RBP18.4■□□□□ 0.54
CTDP1-207ENST00000591598 GLT8D2Q9H1C3 349 aa18.4■□□□□ 0.54
CTDP1-207ENST00000591598 GOLGA6BA6NDN3 693 aa18.4■□□□□ 0.54
CTDP1-207ENST00000591598 ANKRD65E5RJM6 399 aa18.4■□□□□ 0.54
CTDP1-207ENST00000591598 RAD17O75943 681 aa18.4■□□□□ 0.54
CTDP1-207ENST00000591598 GNA14O95837 355 aa18.4■□□□□ 0.54
CTDP1-207ENST00000591598 SYF2O95926 243 aaKnown RBP18.4■□□□□ 0.54
CTDP1-207ENST00000591598 AP3B2Q13367 1082 aa18.4■□□□□ 0.54
CTDP1-207ENST00000591598 KLHL7Q8IXQ5 586 aa18.4■□□□□ 0.54
CTDP1-207ENST00000591598 SH2D3AQ9BRG2 576 aa18.4■□□□□ 0.54
CTDP1-207ENST00000591598 MYO3BQ8WXR4 1341 aa18.4■□□□□ 0.54
CTDP1-207ENST00000591598 RPA1P27694 616 aa18.4■□□□□ 0.54
CTDP1-207ENST00000591598 ABCB11O95342 1321 aa18.39■□□□□ 0.54
CTDP1-207ENST00000591598 PPIP5K2O43314 1243 aa18.39■□□□□ 0.53
CTDP1-207ENST00000591598 FAM13AO94988 1023 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms