RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 RSPH10BP0C881 870 aa10.89□□□□□ -0.67
BRCA1-226ENST00000591534 ZNF286BP0CG31 522 aa10.89□□□□□ -0.67
BRCA1-226ENST00000591534 HOXD8P13378 290 aaPredicted RBP10.89□□□□□ -0.67
BRCA1-226ENST00000591534 THPOP40225 353 aa10.89□□□□□ -0.67
BRCA1-226ENST00000591534 PTPN5P54829 565 aa10.89□□□□□ -0.67
BRCA1-226ENST00000591534 ERVK-21P61565 698 aa10.89□□□□□ -0.67
BRCA1-226ENST00000591534 NEDD9Q14511 834 aa10.89□□□□□ -0.67
BRCA1-226ENST00000591534 PGM5Q15124 567 aa10.89□□□□□ -0.67
BRCA1-226ENST00000591534 ZNF618Q5T7W0 954 aa10.89□□□□□ -0.67
BRCA1-226ENST00000591534 RALYLQ86SE5 291 aaKnown RBP10.89□□□□□ -0.67
BRCA1-226ENST00000591534 DHX38Q92620 1227 aaKnown RBP10.89□□□□□ -0.67
BRCA1-226ENST00000591534 ATP6V0A1Q93050 837 aa10.89□□□□□ -0.67
BRCA1-226ENST00000591534 MTMR8Q96EF0 704 aa10.89□□□□□ -0.67
BRCA1-226ENST00000591534 USP26Q9BXU7 913 aa10.89□□□□□ -0.67
BRCA1-226ENST00000591534 ZNF215Q9UL58 517 aaPredicted RBP10.89□□□□□ -0.67
BRCA1-226ENST00000591534 HCN4Q9Y3Q4 1203 aa10.89□□□□□ -0.67
BRCA1-226ENST00000591534 PNMA6FA0A0J9YX94 578 aa10.88□□□□□ -0.67
BRCA1-226ENST00000591534 PALM3A6NDB9 673 aaPredicted RBP10.88□□□□□ -0.67
BRCA1-226ENST00000591534 EPOPA6NHQ4 379 aa10.88□□□□□ -0.67
BRCA1-226ENST00000591534 H3BRB1 525 aa10.88□□□□□ -0.67
BRCA1-226ENST00000591534 IFIT3O14879 490 aaKnown RBP10.88□□□□□ -0.67
BRCA1-226ENST00000591534 TRANK1O15050 2925 aa10.88□□□□□ -0.67
BRCA1-226ENST00000591534 HOXA13P31271 388 aaPredicted RBP10.88□□□□□ -0.67
BRCA1-226ENST00000591534 DEFB103AP81534 67 aa10.88□□□□□ -0.67
BRCA1-226ENST00000591534 XRRA1Q6P2D8 792 aa10.88□□□□□ -0.67
BRCA1-226ENST00000591534 CATIPQ7Z7H3 387 aa10.88□□□□□ -0.67
BRCA1-226ENST00000591534 SERINC5Q86VE9 423 aa10.88□□□□□ -0.67
BRCA1-226ENST00000591534 FCHSD1Q86WN1 690 aa10.88□□□□□ -0.67
BRCA1-226ENST00000591534 HOMER1Q86YM7 354 aa10.88□□□□□ -0.67
BRCA1-226ENST00000591534 FAM160A2Q8N612 972 aaPredicted RBP10.88□□□□□ -0.67
BRCA1-226ENST00000591534 GIMAP8Q8ND71 665 aaPredicted RBP10.88□□□□□ -0.67
BRCA1-226ENST00000591534 SEPT8Q92599 483 aa10.88□□□□□ -0.67
BRCA1-226ENST00000591534 CUL5Q93034 780 aa10.88□□□□□ -0.67
BRCA1-226ENST00000591534 CTAGE1Q96RT6 745 aa10.88□□□□□ -0.67
BRCA1-226ENST00000591534 TUT1Q9H6E5 874 aaKnown RBP10.88□□□□□ -0.67
BRCA1-226ENST00000591534 MAD2L2Q9UI95 211 aa10.88□□□□□ -0.67
BRCA1-226ENST00000591534 LCHNA4D1U4 455 aa10.87□□□□□ -0.67
BRCA1-226ENST00000591534 LINC01553A4QN01 128 aa10.87□□□□□ -0.67
BRCA1-226ENST00000591534 UBA1P22314 1058 aaKnown RBP10.87□□□□□ -0.67
BRCA1-226ENST00000591534 PLA2G5P39877 138 aa10.87□□□□□ -0.67
BRCA1-226ENST00000591534 GPNMBQ14956 572 aa10.87□□□□□ -0.67
BRCA1-226ENST00000591534 WTAPQ15007 396 aa10.87□□□□□ -0.67
BRCA1-226ENST00000591534 SEC23AQ15436 765 aa10.87□□□□□ -0.67
BRCA1-226ENST00000591534 TRIM71Q2Q1W2 868 aaKnown RBP10.87□□□□□ -0.67
BRCA1-226ENST00000591534 HSDL1Q3SXM5 330 aa10.87□□□□□ -0.67
BRCA1-226ENST00000591534 TMEM31Q5JXX7 168 aa10.87□□□□□ -0.67
BRCA1-226ENST00000591534 TTC22Q5TAA0 569 aa10.87□□□□□ -0.67
BRCA1-226ENST00000591534 KRT40Q6A162 431 aa10.87□□□□□ -0.67
BRCA1-226ENST00000591534 METTL7BQ6UX53 244 aa10.87□□□□□ -0.67
BRCA1-226ENST00000591534 MYOCDQ8IZQ8 938 aa10.87□□□□□ -0.67
BRCA1-226ENST00000591534 STAG2Q8N3U4 1231 aa10.87□□□□□ -0.67
BRCA1-226ENST00000591534 GDPD5Q8WTR4 605 aa10.87□□□□□ -0.67
BRCA1-226ENST00000591534 APBB2Q92870 758 aa10.87□□□□□ -0.67
BRCA1-226ENST00000591534 NECAB3Q96P71 396 aaPredicted RBP10.87□□□□□ -0.67
BRCA1-226ENST00000591534 YME1L1Q96TA2 773 aa10.87□□□□□ -0.67
BRCA1-226ENST00000591534 RIOX1Q9H6W3 641 aa10.87□□□□□ -0.67
BRCA1-226ENST00000591534 SUGCTQ9HAC7 445 aa10.87□□□□□ -0.67
BRCA1-226ENST00000591534 MTUS1Q9ULD2 1270 aa10.87□□□□□ -0.67
BRCA1-226ENST00000591534 FAM50BQ9Y247 325 aa10.87□□□□□ -0.67
BRCA1-226ENST00000591534 MYO9BQ13459 2157 aa10.86□□□□□ -0.67
BRCA1-226ENST00000591534 LCTP09848 1927 aa10.86□□□□□ -0.67
BRCA1-226ENST00000591534 OPLAHO14841 1288 aa10.86□□□□□ -0.67
BRCA1-226ENST00000591534 FIBPO43427 364 aa10.86□□□□□ -0.67
BRCA1-226ENST00000591534 LPXNO60711 386 aa10.86□□□□□ -0.67
BRCA1-226ENST00000591534 RGS20O76081 388 aa10.86□□□□□ -0.67
BRCA1-226ENST00000591534 ARHGEF15O94989 841 aa10.86□□□□□ -0.67
BRCA1-226ENST00000591534 JUNDP17535 347 aa10.86□□□□□ -0.67
BRCA1-226ENST00000591534 KIF5BP33176 963 aa10.86□□□□□ -0.67
BRCA1-226ENST00000591534 GRM4Q14833 912 aa10.86□□□□□ -0.67
BRCA1-226ENST00000591534 TIGD5Q53EQ6 642 aa10.86□□□□□ -0.67
BRCA1-226ENST00000591534 PLEKHG4Q58EX7 1191 aa10.86□□□□□ -0.67
BRCA1-226ENST00000591534 FAM117BQ6P1L5 589 aa10.86□□□□□ -0.67
BRCA1-226ENST00000591534 RSPH3Q86UC2 560 aa10.86□□□□□ -0.67
BRCA1-226ENST00000591534 NLRX1Q86UT6 975 aa10.86□□□□□ -0.67
BRCA1-226ENST00000591534 DBF4BQ8NFT6 615 aa10.86□□□□□ -0.67
BRCA1-226ENST00000591534 NCOA7Q8NI08 942 aa10.86□□□□□ -0.67
BRCA1-226ENST00000591534 CDHR1Q96JP9 859 aa10.86□□□□□ -0.67
BRCA1-226ENST00000591534 PIGSQ96S52 555 aa10.86□□□□□ -0.67
BRCA1-226ENST00000591534 SPSB2Q99619 263 aa10.86□□□□□ -0.67
BRCA1-226ENST00000591534 LZTS2Q9BRK4 669 aa10.86□□□□□ -0.67
BRCA1-226ENST00000591534 C16orf70Q9BSU1 422 aa10.86□□□□□ -0.67
BRCA1-226ENST00000591534 UBE2ZQ9H832 354 aaPredicted RBP10.86□□□□□ -0.67
BRCA1-226ENST00000591534 PRDM9Q9NQV7 894 aa10.86□□□□□ -0.67
BRCA1-226ENST00000591534 MAP10Q9P2G4 905 aa10.86□□□□□ -0.67
BRCA1-226ENST00000591534 SEC63Q9UGP8 760 aaKnown RBP10.86□□□□□ -0.67
BRCA1-226ENST00000591534 BDP1A6H8Y1 2624 aa10.86□□□□□ -0.67
BRCA1-226ENST00000591534 NCK2O43639 380 aa10.85□□□□□ -0.67
BRCA1-226ENST00000591534 LGALS2P05162 132 aa10.85□□□□□ -0.67
BRCA1-226ENST00000591534 RPLP2P05387 115 aaKnown RBP10.85□□□□□ -0.67
BRCA1-226ENST00000591534 SMIM10L2AP0DMW4 78 aa10.85□□□□□ -0.67
BRCA1-226ENST00000591534 SMIM10L2BP0DMW5 78 aa10.85□□□□□ -0.67
BRCA1-226ENST00000591534 ICAM3P32942 547 aa10.85□□□□□ -0.67
BRCA1-226ENST00000591534 GNAQP50148 359 aa10.85□□□□□ -0.67
BRCA1-226ENST00000591534 HTRA4P83105 476 aaPredicted RBP10.85□□□□□ -0.67
BRCA1-226ENST00000591534 ZNF200P98182 395 aaPredicted RBP10.85□□□□□ -0.67
BRCA1-226ENST00000591534 LEXMQ3ZCV2 418 aa10.85□□□□□ -0.67
BRCA1-226ENST00000591534 TRAF7Q6Q0C0 670 aa10.85□□□□□ -0.67
BRCA1-226ENST00000591534 TMCO2Q7Z6W1 182 aaPredicted RBP10.85□□□□□ -0.67
BRCA1-226ENST00000591534 TMTC2Q8N394 836 aa10.85□□□□□ -0.67
BRCA1-226ENST00000591534 CTCFLQ8NI51 663 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms