RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 TTLL12Q14166 644 aaPredicted RBP18.61■□□□□ 0.57
SMARCA4-215ENST00000590574 BEND6Q5SZJ8 279 aaPredicted RBP18.61■□□□□ 0.57
SMARCA4-215ENST00000590574 VSIG1Q86XK7 387 aa18.61■□□□□ 0.57
SMARCA4-215ENST00000590574 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.61■□□□□ 0.57
SMARCA4-215ENST00000590574 DHX36Q9H2U1 1008 aaKnown RBP18.61■□□□□ 0.57
SMARCA4-215ENST00000590574 FAM169AQ9Y6X4 670 aa18.61■□□□□ 0.57
SMARCA4-215ENST00000590574 LLGL1Q15334 1064 aa18.61■□□□□ 0.57
SMARCA4-215ENST00000590574 MAK16Q9BXY0 300 aaKnown RBP18.61■□□□□ 0.57
SMARCA4-215ENST00000590574 INTS9Q9NV88 658 aaKnown RBP18.61■□□□□ 0.57
SMARCA4-215ENST00000590574 AKR1B1P15121 316 aa18.6■□□□□ 0.57
SMARCA4-215ENST00000590574 AP3B2Q13367 1082 aa18.6■□□□□ 0.57
SMARCA4-215ENST00000590574 CCDC63Q8NA47 563 aa18.6■□□□□ 0.57
SMARCA4-215ENST00000590574 MSANTD4Q8NCY6 345 aa18.6■□□□□ 0.57
SMARCA4-215ENST00000590574 FMO2Q99518 471 aa18.6■□□□□ 0.57
SMARCA4-215ENST00000590574 MPHOSPH6Q99547 160 aaKnown RBP18.6■□□□□ 0.57
SMARCA4-215ENST00000590574 COA1Q9GZY4 146 aa18.6■□□□□ 0.57
SMARCA4-215ENST00000590574 THAP12O43422 761 aa18.6■□□□□ 0.57
SMARCA4-215ENST00000590574 INTS5Q6P9B9 1019 aaKnown RBP18.6■□□□□ 0.57
SMARCA4-215ENST00000590574 GRK7Q8WTQ7 553 aa18.6■□□□□ 0.57
SMARCA4-215ENST00000590574 VPS37BQ9H9H4 285 aa18.6■□□□□ 0.57
SMARCA4-215ENST00000590574 GRID2IPA4D2P6 1211 aa18.6■□□□□ 0.57
SMARCA4-215ENST00000590574 MFAP3P55082 362 aa18.6■□□□□ 0.57
SMARCA4-215ENST00000590574 KNOP1Q1ED39 458 aaKnown RBP18.6■□□□□ 0.57
SMARCA4-215ENST00000590574 NLRX1Q86UT6 975 aa18.6■□□□□ 0.57
SMARCA4-215ENST00000590574 PRDM4Q9UKN5 801 aa18.6■□□□□ 0.57
SMARCA4-215ENST00000590574 CCPG1Q9ULG6 757 aa18.6■□□□□ 0.57
SMARCA4-215ENST00000590574 FAM208AQ9UK61 1670 aaKnown RBP18.6■□□□□ 0.57
SMARCA4-215ENST00000590574 FAM196BA6NMK8 535 aa18.6■□□□□ 0.57
SMARCA4-215ENST00000590574 GBP1P32455 592 aa18.6■□□□□ 0.57
SMARCA4-215ENST00000590574 MAP2K2P36507 400 aa18.6■□□□□ 0.57
SMARCA4-215ENST00000590574 PDIA5Q14554 519 aa18.6■□□□□ 0.57
SMARCA4-215ENST00000590574 OTUD6AQ7L8S5 288 aa18.6■□□□□ 0.57
SMARCA4-215ENST00000590574 TADA2BQ86TJ2 420 aa18.6■□□□□ 0.57
SMARCA4-215ENST00000590574 JDP2Q8WYK2 163 aa18.6■□□□□ 0.57
SMARCA4-215ENST00000590574 DNAJC7Q99615 494 aa18.6■□□□□ 0.57
SMARCA4-215ENST00000590574 RASA1P20936 1047 aa18.59■□□□□ 0.57
SMARCA4-215ENST00000590574 TRPC3Q13507 836 aa18.59■□□□□ 0.57
SMARCA4-215ENST00000590574 FYB2Q5VWT5 728 aa18.59■□□□□ 0.57
SMARCA4-215ENST00000590574 ZNF653Q96CK0 615 aa18.59■□□□□ 0.57
SMARCA4-215ENST00000590574 C1orf112Q9NSG2 853 aa18.59■□□□□ 0.57
SMARCA4-215ENST00000590574 HHATQ5VTY9 493 aa18.59■□□□□ 0.57
SMARCA4-215ENST00000590574 DNAJC12Q9UKB3 198 aa18.59■□□□□ 0.57
SMARCA4-215ENST00000590574 STK38LQ9Y2H1 464 aa18.59■□□□□ 0.57
SMARCA4-215ENST00000590574 CCDC188H7C350 402 aa18.59■□□□□ 0.57
SMARCA4-215ENST00000590574 CTNND1O60716 968 aaKnown RBP18.59■□□□□ 0.57
SMARCA4-215ENST00000590574 STAT2P52630 851 aa18.59■□□□□ 0.57
SMARCA4-215ENST00000590574 NAALADL2Q58DX5 795 aa18.59■□□□□ 0.57
SMARCA4-215ENST00000590574 SRLQ86TD4 932 aa18.59■□□□□ 0.57
SMARCA4-215ENST00000590574 CCDC13Q8IYE1 715 aa18.59■□□□□ 0.57
SMARCA4-215ENST00000590574 CCDC197Q8NCU1 140 aa18.59■□□□□ 0.57
SMARCA4-215ENST00000590574 WDR11Q9BZH6 1224 aa18.59■□□□□ 0.57
SMARCA4-215ENST00000590574 ZNF446Q9NWS9 450 aa18.59■□□□□ 0.57
SMARCA4-215ENST00000590574 FER1L4A9Z1Z3 1794 aa18.59■□□□□ 0.57
SMARCA4-215ENST00000590574 CLNS1AP54105 237 aaKnown RBP18.59■□□□□ 0.57
SMARCA4-215ENST00000590574 SUPT20HQ8NEM7 779 aa18.59■□□□□ 0.57
SMARCA4-215ENST00000590574 DCAF4Q8WV16 495 aa18.59■□□□□ 0.57
SMARCA4-215ENST00000590574 ZMYND12Q9H0C1 365 aa18.59■□□□□ 0.57
SMARCA4-215ENST00000590574 A0A1W2PQJ5 194 aa18.58■□□□□ 0.57
SMARCA4-215ENST00000590574 SORBS3O60504 671 aa18.58■□□□□ 0.57
SMARCA4-215ENST00000590574 ATF2P15336 505 aa18.58■□□□□ 0.57
SMARCA4-215ENST00000590574 SLCO1A2P46721 670 aa18.58■□□□□ 0.57
SMARCA4-215ENST00000590574 ARHGEF16Q5VV41 709 aa18.58■□□□□ 0.57
SMARCA4-215ENST00000590574 ACCSQ96QU6 501 aa18.58■□□□□ 0.57
SMARCA4-215ENST00000590574 ARHGAP4P98171 946 aa18.58■□□□□ 0.57
SMARCA4-215ENST00000590574 DMP1Q13316 513 aaPredicted RBP18.58■□□□□ 0.57
SMARCA4-215ENST00000590574 SNX1Q13596 522 aa18.58■□□□□ 0.57
SMARCA4-215ENST00000590574 TRAPPC11Q7Z392 1133 aa18.58■□□□□ 0.57
SMARCA4-215ENST00000590574 FLT1P17948 1338 aa18.58■□□□□ 0.57
SMARCA4-215ENST00000590574 BMP6P22004 513 aa18.58■□□□□ 0.56
SMARCA4-215ENST00000590574 VGLL2Q8N8G2 317 aa18.58■□□□□ 0.56
SMARCA4-215ENST00000590574 LINC00116Q8NCU8 138 aa18.58■□□□□ 0.56
SMARCA4-215ENST00000590574 ANKZF1Q9H8Y5 726 aa18.58■□□□□ 0.56
SMARCA4-215ENST00000590574 PSD3Q9NYI0 1048 aa18.58■□□□□ 0.56
SMARCA4-215ENST00000590574 FMN2Q9NZ56 1722 aa18.58■□□□□ 0.56
SMARCA4-215ENST00000590574 CLRN2A0PK11 232 aa18.58■□□□□ 0.56
SMARCA4-215ENST00000590574 PLEKP08567 350 aaPredicted RBP18.58■□□□□ 0.56
SMARCA4-215ENST00000590574 TTBK2Q6IQ55 1244 aa18.58■□□□□ 0.56
SMARCA4-215ENST00000590574 CNKSR2Q8WXI2 1034 aa18.58■□□□□ 0.56
SMARCA4-215ENST00000590574 EDEM3Q9BZQ6 932 aa18.58■□□□□ 0.56
SMARCA4-215ENST00000590574 DDX47Q9H0S4 455 aaKnown RBP18.58■□□□□ 0.56
SMARCA4-215ENST00000590574 MST1RQ04912 1400 aa18.58■□□□□ 0.56
SMARCA4-215ENST00000590574 QRICH1Q2TAL8 776 aa18.58■□□□□ 0.56
SMARCA4-215ENST00000590574 FERMT1Q9BQL6 677 aa18.58■□□□□ 0.56
SMARCA4-215ENST00000590574 A0A1B0GUA9 196 aa18.57■□□□□ 0.56
SMARCA4-215ENST00000590574 FAM237AA0A1B0GTK4 181 aa18.57■□□□□ 0.56
SMARCA4-215ENST00000590574 SNCBQ16143 134 aa18.57■□□□□ 0.56
SMARCA4-215ENST00000590574 NEK9Q8TD19 979 aa18.57■□□□□ 0.56
SMARCA4-215ENST00000590574 CLEC10AQ8IUN9 316 aa18.57■□□□□ 0.56
SMARCA4-215ENST00000590574 POMGNT1Q8WZA1 660 aa18.57■□□□□ 0.56
SMARCA4-215ENST00000590574 RUNDC3BQ96NL0 473 aa18.57■□□□□ 0.56
SMARCA4-215ENST00000590574 NT5C1BQ96P26 610 aa18.57■□□□□ 0.56
SMARCA4-215ENST00000590574 INTS13Q9NVM9 706 aa18.57■□□□□ 0.56
SMARCA4-215ENST00000590574 H3BQF6 201 aa18.57■□□□□ 0.56
SMARCA4-215ENST00000590574 TRIM66O15016 1216 aa18.57■□□□□ 0.56
SMARCA4-215ENST00000590574 LIG4P49917 911 aa18.57■□□□□ 0.56
SMARCA4-215ENST00000590574 HOOK2Q96ED9 719 aa18.57■□□□□ 0.56
SMARCA4-215ENST00000590574 RBM12Q9NTZ6 932 aaKnown RBP18.57■□□□□ 0.56
SMARCA4-215ENST00000590574 DUSP10Q9Y6W6 482 aa18.57■□□□□ 0.56
SMARCA4-215ENST00000590574 FAM205AQ6ZU69 1335 aa18.56■□□□□ 0.56
SMARCA4-215ENST00000590574 HERVK_113P62684 666 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms