RNA–Protein interactions for RNA: ENST00000590416.1

LSM14A-208, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-208ENST00000590416 CDK7P50613 346 aa18.94■□□□□ 0.62
LSM14A-208ENST00000590416 PTGDRQ13258 359 aa18.94■□□□□ 0.62
LSM14A-208ENST00000590416 PPP2R5CQ13362 524 aa18.94■□□□□ 0.62
LSM14A-208ENST00000590416 TMEM266Q2M3C6 531 aa18.94■□□□□ 0.62
LSM14A-208ENST00000590416 SLC43A3Q8NBI5 491 aa18.94■□□□□ 0.62
LSM14A-208ENST00000590416 RDM1Q8NG50 284 aa18.94■□□□□ 0.62
LSM14A-208ENST00000590416 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.94■□□□□ 0.62
LSM14A-208ENST00000590416 VAV3Q9UKW4 847 aa18.94■□□□□ 0.62
LSM14A-208ENST00000590416 TRIP12Q14669 1992 aaPredicted RBP18.93■□□□□ 0.62
LSM14A-208ENST00000590416 C17orf102A2RUQ5 167 aa18.93■□□□□ 0.62
LSM14A-208ENST00000590416 CLTBP09497 229 aa18.93■□□□□ 0.62
LSM14A-208ENST00000590416 SMIM10L2AP0DMW4 78 aa18.93■□□□□ 0.62
LSM14A-208ENST00000590416 SMIM10L2BP0DMW5 78 aa18.93■□□□□ 0.62
LSM14A-208ENST00000590416 ZSCAN22P10073 491 aaPredicted RBP18.93■□□□□ 0.62
LSM14A-208ENST00000590416 PTPN11Q06124 597 aaPredicted RBP18.93■□□□□ 0.62
LSM14A-208ENST00000590416 PLPPR4Q7Z2D5 763 aa18.93■□□□□ 0.62
LSM14A-208ENST00000590416 MTMR9Q96QG7 549 aa18.93■□□□□ 0.62
LSM14A-208ENST00000590416 TRMT13Q9NUP7 481 aaKnown RBP18.93■□□□□ 0.62
LSM14A-208ENST00000590416 ZMYND8Q9ULU4 1186 aaPredicted RBP18.93■□□□□ 0.62
LSM14A-208ENST00000590416 EML1O00423 815 aa18.92■□□□□ 0.62
LSM14A-208ENST00000590416 B4GALT4O60513 344 aa18.92■□□□□ 0.62
LSM14A-208ENST00000590416 TECP42680 631 aa18.92■□□□□ 0.62
LSM14A-208ENST00000590416 IGBP1P78318 339 aa18.92■□□□□ 0.62
LSM14A-208ENST00000590416 FOXD4L6Q3SYB3 417 aaPredicted RBP18.92■□□□□ 0.62
LSM14A-208ENST00000590416 FAM173BQ6P4H8 233 aa18.92■□□□□ 0.62
LSM14A-208ENST00000590416 FOXD4L3Q6VB84 417 aaPredicted RBP18.92■□□□□ 0.62
LSM14A-208ENST00000590416 ANKRD33Q7Z3H0 272 aa18.92■□□□□ 0.62
LSM14A-208ENST00000590416 FAM126BQ8IXS8 530 aa18.92■□□□□ 0.62
LSM14A-208ENST00000590416 BANK1Q8NDB2 785 aa18.92■□□□□ 0.62
LSM14A-208ENST00000590416 AFAP1L1Q8TED9 768 aa18.92■□□□□ 0.62
LSM14A-208ENST00000590416 TNPO1Q92973 898 aaKnown RBP18.92■□□□□ 0.62
LSM14A-208ENST00000590416 TOX2Q96NM4 488 aa18.92■□□□□ 0.62
LSM14A-208ENST00000590416 TRPV6Q9H1D0 765 aa18.92■□□□□ 0.62
LSM14A-208ENST00000590416 RNPEPQ9H4A4 650 aa18.92■□□□□ 0.62
LSM14A-208ENST00000590416 TMEM39AQ9NV64 488 aa18.92■□□□□ 0.62
LSM14A-208ENST00000590416 GTF2IRD1Q9UHL9 959 aa18.92■□□□□ 0.62
LSM14A-208ENST00000590416 CEP131Q9UPN4 1083 aa18.92■□□□□ 0.62
LSM14A-208ENST00000590416 IGKV6D-21A0A0A0MT36 114 aa18.91■□□□□ 0.62
LSM14A-208ENST00000590416 POTEB3A0JP26 581 aa18.91■□□□□ 0.62
LSM14A-208ENST00000590416 POTEMA6NI47 508 aa18.91■□□□□ 0.62
LSM14A-208ENST00000590416 LAD1O00515 517 aa18.91■□□□□ 0.62
LSM14A-208ENST00000590416 F13A1P00488 732 aa18.91■□□□□ 0.62
LSM14A-208ENST00000590416 GNAT1P11488 350 aa18.91■□□□□ 0.62
LSM14A-208ENST00000590416 SYN1P17600 705 aa18.91■□□□□ 0.62
LSM14A-208ENST00000590416 SLC26A2P50443 739 aa18.91■□□□□ 0.62
LSM14A-208ENST00000590416 CEBPZQ03701 1054 aaKnown RBP18.91■□□□□ 0.62
LSM14A-208ENST00000590416 PPFIA1Q13136 1202 aa18.91■□□□□ 0.62
LSM14A-208ENST00000590416 PKP1Q13835 747 aa18.91■□□□□ 0.62
LSM14A-208ENST00000590416 PLCB4Q15147 1175 aa18.91■□□□□ 0.62
LSM14A-208ENST00000590416 PTGISQ16647 500 aa18.91■□□□□ 0.62
LSM14A-208ENST00000590416 GDF6Q6KF10 455 aaPredicted RBP18.91■□□□□ 0.62
LSM14A-208ENST00000590416 POTEBQ6S5H4 581 aa18.91■□□□□ 0.62
LSM14A-208ENST00000590416 SESTD1Q86VW0 696 aa18.91■□□□□ 0.62
LSM14A-208ENST00000590416 ATP6V0A1Q93050 837 aa18.91■□□□□ 0.62
LSM14A-208ENST00000590416 IGSF9BQ9UPX0 1349 aa18.91■□□□□ 0.62
LSM14A-208ENST00000590416 BMP15O95972 392 aa18.9■□□□□ 0.62
LSM14A-208ENST00000590416 FAAP100Q0VG06 881 aa18.9■□□□□ 0.62
LSM14A-208ENST00000590416 EPHA7Q15375 998 aa18.9■□□□□ 0.62
LSM14A-208ENST00000590416 SF3A1Q15459 793 aaKnown RBP18.9■□□□□ 0.62
LSM14A-208ENST00000590416 UGCGQ16739 394 aa18.9■□□□□ 0.62
LSM14A-208ENST00000590416 B3GNT9Q6UX72 402 aa18.9■□□□□ 0.62
LSM14A-208ENST00000590416 C4orf32Q8N8J7 132 aa18.9■□□□□ 0.62
LSM14A-208ENST00000590416 RAB34Q9BZG1 259 aa18.9■□□□□ 0.62
LSM14A-208ENST00000590416 PDLIM7Q9NR12 457 aa18.9■□□□□ 0.62
LSM14A-208ENST00000590416 SETD4Q9NVD3 440 aa18.9■□□□□ 0.62
LSM14A-208ENST00000590416 MAFBQ9Y5Q3 323 aaPredicted RBP18.9■□□□□ 0.62
LSM14A-208ENST00000590416 HBP1O60381 514 aa18.89■□□□□ 0.61
LSM14A-208ENST00000590416 DKC1O60832 514 aaKnown RBP eCLIP18.89■□□□□ 0.61
LSM14A-208ENST00000590416 CYP2C9P11712 490 aa18.89■□□□□ 0.61
LSM14A-208ENST00000590416 ZNF200P98182 395 aaPredicted RBP18.89■□□□□ 0.61
LSM14A-208ENST00000590416 ATP2C1P98194 919 aaPredicted RBP18.89■□□□□ 0.61
LSM14A-208ENST00000590416 PRKCEQ02156 737 aa18.89■□□□□ 0.61
LSM14A-208ENST00000590416 CYP4A11Q02928 519 aa18.89■□□□□ 0.61
LSM14A-208ENST00000590416 SPIRE1Q08AE8 756 aa18.89■□□□□ 0.61
LSM14A-208ENST00000590416 GRIK4Q16099 956 aa18.89■□□□□ 0.61
LSM14A-208ENST00000590416 DTHD1Q6ZMT9 781 aa18.89■□□□□ 0.61
LSM14A-208ENST00000590416 SH3RF1Q7Z6J0 888 aa18.89■□□□□ 0.61
LSM14A-208ENST00000590416 ATP8B4Q8TF62 1192 aa18.89■□□□□ 0.61
LSM14A-208ENST00000590416 DYDC2Q96IM9 177 aa18.89■□□□□ 0.61
LSM14A-208ENST00000590416 FAM167AQ96KS9 214 aa18.89■□□□□ 0.61
LSM14A-208ENST00000590416 ZNF396Q96N95 335 aaPredicted RBP18.89■□□□□ 0.61
LSM14A-208ENST00000590416 EIF2AK1Q9BQI3 630 aaKnown RBP18.89■□□□□ 0.61
LSM14A-208ENST00000590416 PPP1R12CQ9BZL4 782 aa18.89■□□□□ 0.61
LSM14A-208ENST00000590416 CLIC4Q9Y696 253 aa18.89■□□□□ 0.61
LSM14A-208ENST00000590416 NRCAMQ92823 1304 aa18.89■□□□□ 0.61
LSM14A-208ENST00000590416 CD4P01730 458 aa18.88■□□□□ 0.61
LSM14A-208ENST00000590416 OATP04181 439 aa18.88■□□□□ 0.61
LSM14A-208ENST00000590416 P4HBP07237 508 aaKnown RBP18.88■□□□□ 0.61
LSM14A-208ENST00000590416 INSRRP14616 1297 aa18.88■□□□□ 0.61
LSM14A-208ENST00000590416 RAG1P15918 1043 aa18.88■□□□□ 0.61
LSM14A-208ENST00000590416 PRPHP41219 470 aa18.88■□□□□ 0.61
LSM14A-208ENST00000590416 QARSP47897 775 aaKnown RBP18.88■□□□□ 0.61
LSM14A-208ENST00000590416 PSMC5P62195 406 aa18.88■□□□□ 0.61
LSM14A-208ENST00000590416 CTTNQ14247 550 aaKnown RBP18.88■□□□□ 0.61
LSM14A-208ENST00000590416 ERMNQ8TAM6 284 aa18.88■□□□□ 0.61
LSM14A-208ENST00000590416 LMBR1Q8WVP7 490 aa18.88■□□□□ 0.61
LSM14A-208ENST00000590416 BBXQ8WY36 941 aaPredicted RBP18.88■□□□□ 0.61
LSM14A-208ENST00000590416 LXNQ9BS40 222 aa18.88■□□□□ 0.61
LSM14A-208ENST00000590416 FTOQ9C0B1 505 aaKnown RBP eCLIP18.88■□□□□ 0.61
LSM14A-208ENST00000590416 NRBP2Q9NSY0 501 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms