RNA–Protein interactions for RNA: ENST00000589614.5

TREM1-204, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TREM1, Length 772 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-204ENST00000589614 CEP85Q6P2H3 762 aa11.1□□□□□ -0.63
TREM1-204ENST00000589614 RASGRP2Q7LDG7 609 aa11.1□□□□□ -0.63
TREM1-204ENST00000589614 DTWD2Q8NBA8 298 aa11.1□□□□□ -0.63
TREM1-204ENST00000589614 NSUN6Q8TEA1 469 aaKnown RBP11.1□□□□□ -0.63
TREM1-204ENST00000589614 FRAT1Q92837 279 aaPredicted RBP11.1□□□□□ -0.63
TREM1-204ENST00000589614 CHMP4CQ96CF2 233 aa11.1□□□□□ -0.63
TREM1-204ENST00000589614 KIF1BPQ96EK5 621 aa11.1□□□□□ -0.63
TREM1-204ENST00000589614 C16orf70Q9BSU1 422 aa11.1□□□□□ -0.63
TREM1-204ENST00000589614 PCDHGA10Q9Y5H3 936 aa11.1□□□□□ -0.63
TREM1-204ENST00000589614 MYH6P13533 1939 aa11.09□□□□□ -0.63
TREM1-204ENST00000589614 EIF3JO75822 258 aaKnown RBP11.09□□□□□ -0.63
TREM1-204ENST00000589614 SLC3A2P08195 630 aaKnown RBP11.09□□□□□ -0.63
TREM1-204ENST00000589614 RBM10P98175 930 aaKnown RBP11.09□□□□□ -0.63
TREM1-204ENST00000589614 RSPO4Q2I0M5 234 aaPredicted RBP11.09□□□□□ -0.63
TREM1-204ENST00000589614 CCDC96Q2M329 555 aa11.09□□□□□ -0.63
TREM1-204ENST00000589614 KIAA0319Q5VV43 1072 aa11.09□□□□□ -0.63
TREM1-204ENST00000589614 MYSM1Q5VVJ2 828 aa11.09□□□□□ -0.63
TREM1-204ENST00000589614 TTBK2Q6IQ55 1244 aa11.09□□□□□ -0.63
TREM1-204ENST00000589614 ANKRD54Q6NXT1 300 aa11.09□□□□□ -0.63
TREM1-204ENST00000589614 SYCE2Q6PIF2 218 aa11.09□□□□□ -0.63
TREM1-204ENST00000589614 CRIPAKQ8N1N5 446 aa11.09□□□□□ -0.63
TREM1-204ENST00000589614 CYP2W1Q8TAV3 490 aa11.09□□□□□ -0.63
TREM1-204ENST00000589614 NECTIN4Q96NY8 510 aa11.09□□□□□ -0.63
TREM1-204ENST00000589614 RNPEPQ9H4A4 650 aa11.09□□□□□ -0.63
TREM1-204ENST00000589614 EHMT1Q9H9B1 1298 aa11.09□□□□□ -0.63
TREM1-204ENST00000589614 IL17RBQ9NRM6 502 aa11.09□□□□□ -0.63
TREM1-204ENST00000589614 MRVI1Q9Y6F6 885 aa11.09□□□□□ -0.63
TREM1-204ENST00000589614 ZFYVE26Q68DK2 2539 aa11.09□□□□□ -0.63
TREM1-204ENST00000589614 CACNA1IQ9P0X4 2223 aa11.08□□□□□ -0.64
TREM1-204ENST00000589614 SETXQ7Z333 2677 aaKnown RBP11.08□□□□□ -0.64
TREM1-204ENST00000589614 C2CD4DB7Z1M9 353 aa11.08□□□□□ -0.64
TREM1-204ENST00000589614 H3BRB1 525 aa11.08□□□□□ -0.64
TREM1-204ENST00000589614 PER2O15055 1255 aa11.08□□□□□ -0.64
TREM1-204ENST00000589614 PI15O43692 258 aa11.08□□□□□ -0.64
TREM1-204ENST00000589614 SMIM10L2AP0DMW4 78 aa11.08□□□□□ -0.64
TREM1-204ENST00000589614 SMIM10L2BP0DMW5 78 aa11.08□□□□□ -0.64
TREM1-204ENST00000589614 GNAT1P11488 350 aa11.08□□□□□ -0.64
TREM1-204ENST00000589614 COL9A2Q14055 689 aaPredicted RBP11.08□□□□□ -0.64
TREM1-204ENST00000589614 HSDL1Q3SXM5 330 aa11.08□□□□□ -0.64
TREM1-204ENST00000589614 KCNV1Q6PIU1 500 aa11.08□□□□□ -0.64
TREM1-204ENST00000589614 ZC3H14Q6PJT7 736 aaKnown RBP11.08□□□□□ -0.64
TREM1-204ENST00000589614 ZDHHC14Q8IZN3 488 aa11.08□□□□□ -0.64
TREM1-204ENST00000589614 FLCNQ8NFG4 579 aa11.08□□□□□ -0.64
TREM1-204ENST00000589614 MICAL1Q8TDZ2 1067 aa11.08□□□□□ -0.64
TREM1-204ENST00000589614 HINFPQ9BQA5 517 aa11.08□□□□□ -0.64
TREM1-204ENST00000589614 TUT1Q9H6E5 874 aaKnown RBP11.08□□□□□ -0.64
TREM1-204ENST00000589614 CEP295Q9C0D2 2601 aa11.08□□□□□ -0.64
TREM1-204ENST00000589614 FNDC1Q4ZHG4 1894 aaPredicted RBP11.08□□□□□ -0.64
TREM1-204ENST00000589614 GPAA1O43292 621 aa11.07□□□□□ -0.64
TREM1-204ENST00000589614 C7P10643 843 aa11.07□□□□□ -0.64
TREM1-204ENST00000589614 NPR3P17342 541 aa11.07□□□□□ -0.64
TREM1-204ENST00000589614 SP100P23497 879 aaPredicted RBP11.07□□□□□ -0.64
TREM1-204ENST00000589614 TECP42680 631 aa11.07□□□□□ -0.64
TREM1-204ENST00000589614 ADAM17P78536 824 aa11.07□□□□□ -0.64
TREM1-204ENST00000589614 ITIH3Q06033 890 aa11.07□□□□□ -0.64
TREM1-204ENST00000589614 TSR1Q2NL82 804 aaKnown RBP11.07□□□□□ -0.64
TREM1-204ENST00000589614 IFNL3Q8IZI9 196 aa11.07□□□□□ -0.64
TREM1-204ENST00000589614 SYTL5Q8TDW5 730 aaPredicted RBP11.07□□□□□ -0.64
TREM1-204ENST00000589614 APPBP2Q92624 585 aa11.07□□□□□ -0.64
TREM1-204ENST00000589614 SPATA33Q96N06 139 aa11.07□□□□□ -0.64
TREM1-204ENST00000589614 TAAR1Q96RJ0 339 aa11.07□□□□□ -0.64
TREM1-204ENST00000589614 RMDN3Q96TC7 470 aa11.07□□□□□ -0.64
TREM1-204ENST00000589614 SMOC2Q9H3U7 446 aa11.07□□□□□ -0.64
TREM1-204ENST00000589614 LOXHD1Q8IVV2 1947 aa11.07□□□□□ -0.64
TREM1-204ENST00000589614 TSPY2A6NKD2 308 aa11.06□□□□□ -0.64
TREM1-204ENST00000589614 PATL2C9JE40 543 aaKnown RBP11.06□□□□□ -0.64
TREM1-204ENST00000589614 MAP3K7O43318 606 aa11.06□□□□□ -0.64
TREM1-204ENST00000589614 CHRNA1P02708 482 aa11.06□□□□□ -0.64
TREM1-204ENST00000589614 GHRP10912 638 aa11.06□□□□□ -0.64
TREM1-204ENST00000589614 CLCN1P35523 988 aa11.06□□□□□ -0.64
TREM1-204ENST00000589614 LPIN1Q14693 890 aa11.06□□□□□ -0.64
TREM1-204ENST00000589614 CELF3Q5SZQ8 465 aaKnown RBP11.06□□□□□ -0.64
TREM1-204ENST00000589614 ZKSCAN2Q63HK3 967 aa11.06□□□□□ -0.64
TREM1-204ENST00000589614 CES5AQ6NT32 575 aa11.06□□□□□ -0.64
TREM1-204ENST00000589614 NPAS4Q8IUM7 802 aa11.06□□□□□ -0.64
TREM1-204ENST00000589614 GPR161Q8N6U8 529 aaKnown RBP11.06□□□□□ -0.64
TREM1-204ENST00000589614 OSBP2Q969R2 916 aa11.06□□□□□ -0.64
TREM1-204ENST00000589614 POMKQ9H5K3 350 aa11.06□□□□□ -0.64
TREM1-204ENST00000589614 GPCPD1Q9NPB8 672 aa11.06□□□□□ -0.64
TREM1-204ENST00000589614 COL20A1Q9P218 1284 aa11.06□□□□□ -0.64
TREM1-204ENST00000589614 USTQ9Y2C2 406 aa11.06□□□□□ -0.64
TREM1-204ENST00000589614 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.06□□□□□ -0.64
TREM1-204ENST00000589614 PCDHB12Q9Y5F1 795 aa11.06□□□□□ -0.64
TREM1-204ENST00000589614 R4GN57 208 aa11.06□□□□□ -0.64
TREM1-204ENST00000589614 CNOT1A5YKK6 2376 aaKnown RBP11.06□□□□□ -0.64
TREM1-204ENST00000589614 ZZEF1O43149 2961 aa11.06□□□□□ -0.64
TREM1-204ENST00000589614 DENND4AQ7Z401 1863 aa11.06□□□□□ -0.64
TREM1-204ENST00000589614 NMT2O60551 498 aa11.05□□□□□ -0.64
TREM1-204ENST00000589614 GGPS1O95749 300 aa11.05□□□□□ -0.64
TREM1-204ENST00000589614 APPP05067 770 aa11.05□□□□□ -0.64
TREM1-204ENST00000589614 ASGR2P07307 311 aa11.05□□□□□ -0.64
TREM1-204ENST00000589614 NR3C2P08235 984 aa11.05□□□□□ -0.64
TREM1-204ENST00000589614 ADRB1P08588 477 aa11.05□□□□□ -0.64
TREM1-204ENST00000589614 STAG3L1P0CL83 205 aa11.05□□□□□ -0.64
TREM1-204ENST00000589614 TGFB3P10600 412 aa11.05□□□□□ -0.64
TREM1-204ENST00000589614 ATXN1P54253 815 aaKnown RBP11.05□□□□□ -0.64
TREM1-204ENST00000589614 ERVFC1P60507 584 aa11.05□□□□□ -0.64
TREM1-204ENST00000589614 PPARAQ07869 468 aa11.05□□□□□ -0.64
TREM1-204ENST00000589614 ACAP1Q15027 740 aa11.05□□□□□ -0.64
TREM1-204ENST00000589614 DCLK2Q8N568 766 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms