RNA–Protein interactions for RNA: ENST00000589222.5

BCAS3-222, Transcript of BCAS3, microtubule associated cell migration factor, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene BCAS3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BCAS3-222	ENST00000589222	RPL13	P26373	211 aa	Known RBP	13.38	□□□□□ -0.27
BCAS3-222	ENST00000589222	ELOA2	Q8IYF1	753 aa	Predicted RBP	13.38	□□□□□ -0.27
BCAS3-222	ENST00000589222	SPATA4	Q8NEY3	305 aa		13.38	□□□□□ -0.27
BCAS3-222	ENST00000589222	FAM76A	Q8TAV0	307 aa		13.38	□□□□□ -0.27
BCAS3-222	ENST00000589222	EIF2AK1	Q9BQI3	630 aa	Known RBP	13.38	□□□□□ -0.27
BCAS3-222	ENST00000589222	JRKL	Q9Y4A0	524 aa		13.38	□□□□□ -0.27
BCAS3-222	ENST00000589222	ZNF142	P52746	1687 aa	Predicted RBP	13.38	□□□□□ -0.27
BCAS3-222	ENST00000589222	TISP43	B9A030	160 aa		13.38	□□□□□ -0.27
BCAS3-222	ENST00000589222	FLOT1	O75955	427 aa		13.38	□□□□□ -0.27
BCAS3-222	ENST00000589222	TNFAIP3	P21580	790 aa		13.38	□□□□□ -0.27
BCAS3-222	ENST00000589222	USP14	P54578	494 aa		13.38	□□□□□ -0.27
BCAS3-222	ENST00000589222	FAM102B	Q5T8I3	360 aa		13.38	□□□□□ -0.27
BCAS3-222	ENST00000589222	CC2D2B	Q6DHV5	1058 aa		13.38	□□□□□ -0.27
BCAS3-222	ENST00000589222	ALKBH5	Q6P6C2	394 aa	Known RBP	13.38	□□□□□ -0.27
BCAS3-222	ENST00000589222	FOXR1	Q6PIV2	292 aa		13.38	□□□□□ -0.27
BCAS3-222	ENST00000589222	GLYCTK	Q8IVS8	523 aa		13.38	□□□□□ -0.27
BCAS3-222	ENST00000589222	ZNF507	Q8TCN5	953 aa		13.38	□□□□□ -0.27
BCAS3-222	ENST00000589222	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.38	□□□□□ -0.27
BCAS3-222	ENST00000589222	PRR12	Q9ULL5	1215 aa		13.38	□□□□□ -0.27
BCAS3-222	ENST00000589222	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.38	□□□□□ -0.27
BCAS3-222	ENST00000589222	ITIH6	Q6UXX5	1313 aa		13.38	□□□□□ -0.27
BCAS3-222	ENST00000589222	EIF3CL	B5ME19	914 aa	Known RBP	13.38	□□□□□ -0.27
BCAS3-222	ENST00000589222	TRIM66	O15016	1216 aa		13.38	□□□□□ -0.27
BCAS3-222	ENST00000589222	FAM186B	Q8IYM0	893 aa		13.38	□□□□□ -0.27
BCAS3-222	ENST00000589222	PPM1K	Q8N3J5	372 aa		13.38	□□□□□ -0.27
BCAS3-222	ENST00000589222	RETREG2	Q8NC44	543 aa		13.38	□□□□□ -0.27
BCAS3-222	ENST00000589222	AGBL1	Q96MI9	1066 aa		13.38	□□□□□ -0.27
BCAS3-222	ENST00000589222	EIF3C	Q99613	913 aa	Known RBP	13.38	□□□□□ -0.27
BCAS3-222	ENST00000589222	ZNF341	Q9BYN7	854 aa		13.38	□□□□□ -0.27
BCAS3-222	ENST00000589222	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.38	□□□□□ -0.27
BCAS3-222	ENST00000589222	DDX47	Q9H0S4	455 aa	Known RBP	13.38	□□□□□ -0.27
BCAS3-222	ENST00000589222	EHD4	Q9H223	541 aa		13.38	□□□□□ -0.27
BCAS3-222	ENST00000589222	RAVER2	Q9HCJ3	691 aa	Known RBP	13.38	□□□□□ -0.27
BCAS3-222	ENST00000589222	CTTNBP2NL	Q9P2B4	639 aa		13.38	□□□□□ -0.27
BCAS3-222	ENST00000589222	CRYBG1	Q9Y4K1	1723 aa		13.38	□□□□□ -0.27
BCAS3-222	ENST00000589222	ZRANB2	O95218	330 aa	Known RBP eCLIP	13.37	□□□□□ -0.27
BCAS3-222	ENST00000589222	KRT5	P13647	590 aa		13.37	□□□□□ -0.27
BCAS3-222	ENST00000589222	LRRC63	Q05C16	580 aa		13.37	□□□□□ -0.27
BCAS3-222	ENST00000589222	CENPP	Q6IPU0	288 aa		13.37	□□□□□ -0.27
BCAS3-222	ENST00000589222	PPP1R18	Q6NYC8	613 aa		13.37	□□□□□ -0.27
BCAS3-222	ENST00000589222	CCDC170	Q8IYT3	715 aa		13.37	□□□□□ -0.27
BCAS3-222	ENST00000589222	SCFD1	Q8WVM8	642 aa		13.37	□□□□□ -0.27
BCAS3-222	ENST00000589222	MRRF	Q96E11	262 aa	Known RBP	13.37	□□□□□ -0.27
BCAS3-222	ENST00000589222	PURB	Q96QR8	312 aa	Known RBP	13.37	□□□□□ -0.27
BCAS3-222	ENST00000589222	DNAJC7	Q99615	494 aa		13.37	□□□□□ -0.27
BCAS3-222	ENST00000589222	PARP4	Q9UKK3	1724 aa	Known RBP	13.37	□□□□□ -0.27
BCAS3-222	ENST00000589222	SIPA1L3	O60292	1781 aa	Predicted RBP	13.37	□□□□□ -0.27
BCAS3-222	ENST00000589222	PVALEF	A0A1B0GWK0	134 aa		13.37	□□□□□ -0.27
BCAS3-222	ENST00000589222	EML1	O00423	815 aa		13.37	□□□□□ -0.27
BCAS3-222	ENST00000589222	CALU	O43852	315 aa	Predicted RBP	13.37	□□□□□ -0.27
BCAS3-222	ENST00000589222	NR3C1	P04150	777 aa		13.37	□□□□□ -0.27
BCAS3-222	ENST00000589222	GCLM	P48507	274 aa		13.37	□□□□□ -0.27
BCAS3-222	ENST00000589222	TNIP1	Q15025	636 aa		13.37	□□□□□ -0.27
BCAS3-222	ENST00000589222	CERS3	Q8IU89	383 aa		13.37	□□□□□ -0.27
BCAS3-222	ENST00000589222	CRAMP1	Q96RY5	1269 aa		13.37	□□□□□ -0.27
BCAS3-222	ENST00000589222	SALL4	Q9UJQ4	1053 aa		13.37	□□□□□ -0.27
BCAS3-222	ENST00000589222	KDM3A	Q9Y4C1	1321 aa		13.37	□□□□□ -0.27
BCAS3-222	ENST00000589222	NUP98	P52948	1817 aa		13.37	□□□□□ -0.27
BCAS3-222	ENST00000589222	KRIT1	O00522	736 aa		13.37	□□□□□ -0.27
BCAS3-222	ENST00000589222	AFP	P02771	609 aa	Known RBP	13.37	□□□□□ -0.27
BCAS3-222	ENST00000589222	CDR1	P51861	262 aa		13.37	□□□□□ -0.27
BCAS3-222	ENST00000589222	TRADD	Q15628	312 aa		13.37	□□□□□ -0.27
BCAS3-222	ENST00000589222	PDXDC1	Q6P996	788 aa		13.37	□□□□□ -0.27
BCAS3-222	ENST00000589222	GBP6	Q6ZN66	633 aa		13.37	□□□□□ -0.27
BCAS3-222	ENST00000589222	EEPD1	Q7L9B9	569 aa		13.37	□□□□□ -0.27
BCAS3-222	ENST00000589222	MIER3	Q7Z3K6	550 aa		13.37	□□□□□ -0.27
BCAS3-222	ENST00000589222	SLFN12	Q8IYM2	578 aa		13.37	□□□□□ -0.27
BCAS3-222	ENST00000589222	TAB3	Q8N5C8	712 aa	Predicted RBP	13.37	□□□□□ -0.27
BCAS3-222	ENST00000589222	MTMR9	Q96QG7	549 aa		13.37	□□□□□ -0.27
BCAS3-222	ENST00000589222	DNAJC17	Q9NVM6	304 aa	Known RBP	13.37	□□□□□ -0.27
BCAS3-222	ENST00000589222	COL4A1	P02462	1669 aa		13.37	□□□□□ -0.27
BCAS3-222	ENST00000589222	KRT14	P02533	472 aa		13.36	□□□□□ -0.27
BCAS3-222	ENST00000589222	MYL1	P05976	194 aa		13.36	□□□□□ -0.27
BCAS3-222	ENST00000589222	STAT1	P42224	750 aa		13.36	□□□□□ -0.27
BCAS3-222	ENST00000589222	PTK2	Q05397	1052 aa		13.36	□□□□□ -0.27
BCAS3-222	ENST00000589222	TMEM179	Q6ZVK1	233 aa		13.36	□□□□□ -0.27
BCAS3-222	ENST00000589222	DPH6	Q7L8W6	267 aa		13.36	□□□□□ -0.27
BCAS3-222	ENST00000589222	PODN	Q7Z5L7	613 aa		13.36	□□□□□ -0.27
BCAS3-222	ENST00000589222	OR2W6P	Q8NHA6	318 aa		13.36	□□□□□ -0.27
BCAS3-222	ENST00000589222		A0A1W2PRG0	241 aa		13.36	□□□□□ -0.27
BCAS3-222	ENST00000589222	MSH4	O15457	936 aa		13.36	□□□□□ -0.27
BCAS3-222	ENST00000589222	MCM3	P25205	808 aa		13.36	□□□□□ -0.27
BCAS3-222	ENST00000589222	CCT5	P48643	541 aa		13.36	□□□□□ -0.27
BCAS3-222	ENST00000589222	CARS	P49589	748 aa	Known RBP	13.36	□□□□□ -0.27
BCAS3-222	ENST00000589222	CEP85L	Q5SZL2	805 aa		13.36	□□□□□ -0.27
BCAS3-222	ENST00000589222	LMBRD2	Q68DH5	695 aa	Predicted RBP	13.36	□□□□□ -0.27
BCAS3-222	ENST00000589222	DAGLB	Q8NCG7	672 aa		13.36	□□□□□ -0.27
BCAS3-222	ENST00000589222	KIFC3	Q9BVG8	833 aa		13.36	□□□□□ -0.27
BCAS3-222	ENST00000589222	MAGEF1	Q9HAY2	307 aa		13.36	□□□□□ -0.27
BCAS3-222	ENST00000589222	SNX12	Q9UMY4	172 aa		13.36	□□□□□ -0.27
BCAS3-222	ENST00000589222	PPP1R2	P41236	205 aa		13.36	□□□□□ -0.27
BCAS3-222	ENST00000589222	ADCY1	Q08828	1119 aa		13.36	□□□□□ -0.27
BCAS3-222	ENST00000589222	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.36	□□□□□ -0.27
BCAS3-222	ENST00000589222	PPAN	Q9NQ55	473 aa	Known RBP	13.36	□□□□□ -0.27
BCAS3-222	ENST00000589222	FAM198A	Q9UFP1	575 aa		13.36	□□□□□ -0.27
BCAS3-222	ENST00000589222	L1RE1	Q9UN81	338 aa		13.36	□□□□□ -0.27
BCAS3-222	ENST00000589222	PLAGL2	Q9UPG8	496 aa		13.36	□□□□□ -0.27
BCAS3-222	ENST00000589222	PTPN22	Q9Y2R2	807 aa		13.36	□□□□□ -0.27
BCAS3-222	ENST00000589222	SOX10	P56693	466 aa		13.35	□□□□□ -0.27
BCAS3-222	ENST00000589222	GNGT1	P63211	74 aa		13.35	□□□□□ -0.27

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