RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 MAP3K20Q9NYL2 800 aaKnown RBP9.75□□□□□ -0.85
SMAD4-206ENST00000588860 PKD2L1Q9P0L9 805 aa9.75□□□□□ -0.85
SMAD4-206ENST00000588860 ADD3Q9UEY8 706 aaKnown RBP9.75□□□□□ -0.85
SMAD4-206ENST00000588860 LRRC37A2A6NM11 1700 aa9.75□□□□□ -0.85
SMAD4-206ENST00000588860 DDX39AO00148 427 aaKnown RBP9.74□□□□□ -0.85
SMAD4-206ENST00000588860 N4BP3O15049 544 aa9.74□□□□□ -0.85
SMAD4-206ENST00000588860 PPP1R12BO60237 982 aaPredicted RBP9.74□□□□□ -0.85
SMAD4-206ENST00000588860 EYA4O95677 639 aa9.74□□□□□ -0.85
SMAD4-206ENST00000588860 MYCLP12524 364 aaPredicted RBP9.74□□□□□ -0.85
SMAD4-206ENST00000588860 ITGB5P18084 799 aa9.74□□□□□ -0.85
SMAD4-206ENST00000588860 CYP11B2P19099 503 aa9.74□□□□□ -0.85
SMAD4-206ENST00000588860 EEF1GP26641 437 aaKnown RBP9.74□□□□□ -0.85
SMAD4-206ENST00000588860 EPHX2P34913 555 aa9.74□□□□□ -0.85
SMAD4-206ENST00000588860 OAZ1P54368 228 aa9.74□□□□□ -0.85
SMAD4-206ENST00000588860 PSMC6P62333 389 aa9.74□□□□□ -0.85
SMAD4-206ENST00000588860 RPS6P62753 249 aaKnown RBP9.74□□□□□ -0.85
SMAD4-206ENST00000588860 EHHADHQ08426 723 aa9.74□□□□□ -0.85
SMAD4-206ENST00000588860 RAD51AP2Q09MP3 1159 aa9.74□□□□□ -0.85
SMAD4-206ENST00000588860 TTLL12Q14166 644 aaPredicted RBP9.74□□□□□ -0.85
SMAD4-206ENST00000588860 CTTNQ14247 550 aaKnown RBP9.74□□□□□ -0.85
SMAD4-206ENST00000588860 LRRC41Q15345 812 aa9.74□□□□□ -0.85
SMAD4-206ENST00000588860 TKFCQ3LXA3 575 aa9.74□□□□□ -0.85
SMAD4-206ENST00000588860 SH3D19Q5HYK7 790 aa9.74□□□□□ -0.85
SMAD4-206ENST00000588860 FAM26FQ5R3K3 315 aa9.74□□□□□ -0.85
SMAD4-206ENST00000588860 GPR153Q6NV75 609 aa9.74□□□□□ -0.85
SMAD4-206ENST00000588860 USP50Q70EL3 339 aaPredicted RBP9.74□□□□□ -0.85
SMAD4-206ENST00000588860 OTOP1Q7RTM1 612 aa9.74□□□□□ -0.85
SMAD4-206ENST00000588860 PPFIBP1Q86W92 1011 aa9.74□□□□□ -0.85
SMAD4-206ENST00000588860 TPH2Q8IWU9 490 aa9.74□□□□□ -0.85
SMAD4-206ENST00000588860 CCDC112Q8NEF3 446 aa9.74□□□□□ -0.85
SMAD4-206ENST00000588860 CDCA5Q96FF9 252 aa9.74□□□□□ -0.85
SMAD4-206ENST00000588860 TSG101Q99816 390 aa9.74□□□□□ -0.85
SMAD4-206ENST00000588860 VPS16Q9H269 839 aa9.74□□□□□ -0.85
SMAD4-206ENST00000588860 SEMA6BQ9H3T3 888 aa9.74□□□□□ -0.85
SMAD4-206ENST00000588860 UNC45AQ9H3U1 944 aa9.74□□□□□ -0.85
SMAD4-206ENST00000588860 ZHX3Q9H4I2 956 aa9.74□□□□□ -0.85
SMAD4-206ENST00000588860 ELP3Q9H9T3 547 aa9.74□□□□□ -0.85
SMAD4-206ENST00000588860 TUFT1Q9NNX1 390 aa9.74□□□□□ -0.85
SMAD4-206ENST00000588860 PXMP2Q9NR77 195 aa9.74□□□□□ -0.85
SMAD4-206ENST00000588860 RGL1Q9NZL6 768 aa9.74□□□□□ -0.85
SMAD4-206ENST00000588860 UBIAD1Q9Y5Z9 338 aa9.74□□□□□ -0.85
SMAD4-206ENST00000588860 MCM3APO60318 1980 aa9.74□□□□□ -0.85
SMAD4-206ENST00000588860 PLXNA1Q9UIW2 1896 aa9.73□□□□□ -0.85
SMAD4-206ENST00000588860 RASSF10A6NK89 507 aa9.73□□□□□ -0.85
SMAD4-206ENST00000588860 IPO5O00410 1097 aaKnown RBP9.73□□□□□ -0.85
SMAD4-206ENST00000588860 TPM2P07951 284 aa9.73□□□□□ -0.85
SMAD4-206ENST00000588860 BCRP11274 1271 aa9.73□□□□□ -0.85
SMAD4-206ENST00000588860 NF2P35240 595 aa9.73□□□□□ -0.85
SMAD4-206ENST00000588860 PBX1P40424 430 aa9.73□□□□□ -0.85
SMAD4-206ENST00000588860 MTIF2P46199 727 aaKnown RBP9.73□□□□□ -0.85
SMAD4-206ENST00000588860 BAATQ14032 418 aaPredicted RBP9.73□□□□□ -0.85
SMAD4-206ENST00000588860 PLS1Q14651 629 aa9.73□□□□□ -0.85
SMAD4-206ENST00000588860 TMEM132BQ14DG7 1078 aa9.73□□□□□ -0.85
SMAD4-206ENST00000588860 PGM5Q15124 567 aa9.73□□□□□ -0.85
SMAD4-206ENST00000588860 EPHA7Q15375 998 aa9.73□□□□□ -0.85
SMAD4-206ENST00000588860 ARSHQ5FYA8 562 aa9.73□□□□□ -0.85
SMAD4-206ENST00000588860 HERC4Q5GLZ8 1057 aaPredicted RBP9.73□□□□□ -0.85
SMAD4-206ENST00000588860 ARHGEF16Q5VV41 709 aa9.73□□□□□ -0.85
SMAD4-206ENST00000588860 CENPPQ6IPU0 288 aa9.73□□□□□ -0.85
SMAD4-206ENST00000588860 GADL1Q6ZQY3 521 aa9.73□□□□□ -0.85
SMAD4-206ENST00000588860 IRF2BP1Q8IU81 584 aa9.73□□□□□ -0.85
SMAD4-206ENST00000588860 MYOCDQ8IZQ8 938 aa9.73□□□□□ -0.85
SMAD4-206ENST00000588860 GUF1Q8N442 669 aaKnown RBP9.73□□□□□ -0.85
SMAD4-206ENST00000588860 SYT2Q8N9I0 419 aaPredicted RBP9.73□□□□□ -0.85
SMAD4-206ENST00000588860 CNOT6LQ96LI5 555 aaKnown RBP9.73□□□□□ -0.85
SMAD4-206ENST00000588860 RMDN3Q96TC7 470 aa9.73□□□□□ -0.85
SMAD4-206ENST00000588860 RIT2Q99578 217 aa9.73□□□□□ -0.85
SMAD4-206ENST00000588860 ACAD9Q9H845 621 aa9.73□□□□□ -0.85
SMAD4-206ENST00000588860 AGO4Q9HCK5 861 aaKnown RBP9.73□□□□□ -0.85
SMAD4-206ENST00000588860 JADE2Q9NQC1 790 aa9.73□□□□□ -0.85
SMAD4-206ENST00000588860 TBC1D7Q9P0N9 293 aa9.73□□□□□ -0.85
SMAD4-206ENST00000588860 ADAMTS5Q9UNA0 930 aa9.73□□□□□ -0.85
SMAD4-206ENST00000588860 RIPK3Q9Y572 518 aa9.73□□□□□ -0.85
SMAD4-206ENST00000588860 ITIH6Q6UXX5 1313 aa9.73□□□□□ -0.85
SMAD4-206ENST00000588860 MYPNQ86TC9 1320 aa9.73□□□□□ -0.85
SMAD4-206ENST00000588860 SPDYE16A6NNV3 312 aaPredicted RBP9.72□□□□□ -0.85
SMAD4-206ENST00000588860 LGALS16A8MUM7 142 aa9.72□□□□□ -0.85
SMAD4-206ENST00000588860 AKR1B15C9JRZ8 316 aaPredicted RBP9.72□□□□□ -0.85
SMAD4-206ENST00000588860 PES1O00541 588 aaKnown RBP9.72□□□□□ -0.85
SMAD4-206ENST00000588860 TBCAO75347 108 aaKnown RBP9.72□□□□□ -0.85
SMAD4-206ENST00000588860 FGFR1OPO95684 399 aaKnown RBP9.72□□□□□ -0.85
SMAD4-206ENST00000588860 ITGBL1O95965 494 aaPredicted RBP9.72□□□□□ -0.85
SMAD4-206ENST00000588860 TPM1P09493 284 aa9.72□□□□□ -0.85
SMAD4-206ENST00000588860 CCND2P30279 289 aa9.72□□□□□ -0.85
SMAD4-206ENST00000588860 ADKP55263 362 aaKnown RBP9.72□□□□□ -0.85
SMAD4-206ENST00000588860 MRPS9P82933 396 aaKnown RBP9.72□□□□□ -0.85
SMAD4-206ENST00000588860 LRRC63Q05C16 580 aa9.72□□□□□ -0.85
SMAD4-206ENST00000588860 MTMR1Q13613 665 aa9.72□□□□□ -0.85
SMAD4-206ENST00000588860 GIT2Q14161 759 aa9.72□□□□□ -0.85
SMAD4-206ENST00000588860 EAPPQ56P03 285 aaPredicted RBP9.72□□□□□ -0.85
SMAD4-206ENST00000588860 TREML2Q5T2D2 321 aa9.72□□□□□ -0.85
SMAD4-206ENST00000588860 TMEM92Q6UXU6 159 aa9.72□□□□□ -0.85
SMAD4-206ENST00000588860 MIER3Q7Z3K6 550 aa9.72□□□□□ -0.85
SMAD4-206ENST00000588860 KCTD17Q8N5Z5 321 aa9.72□□□□□ -0.85
SMAD4-206ENST00000588860 GLIS3Q8NEA6 775 aa9.72□□□□□ -0.85
SMAD4-206ENST00000588860 NEK9Q8TD19 979 aa9.72□□□□□ -0.85
SMAD4-206ENST00000588860 CLMNQ96JQ2 1002 aa9.72□□□□□ -0.85
SMAD4-206ENST00000588860 PURBQ96QR8 312 aaKnown RBP9.72□□□□□ -0.85
SMAD4-206ENST00000588860 HSD17B14Q9BPX1 270 aa9.72□□□□□ -0.85
SMAD4-206ENST00000588860 REEP2Q9BRK0 252 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms