RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 SEPT1Q8WYJ6 367 aa21.16■□□□□ 0.98
CCDC43-204ENST00000588687 LSG1Q9H089 658 aaKnown RBP21.16■□□□□ 0.98
CCDC43-204ENST00000588687 PSTPIP2Q9H939 334 aa21.16■□□□□ 0.98
CCDC43-204ENST00000588687 AGO3Q9H9G7 860 aaKnown RBP21.16■□□□□ 0.98
CCDC43-204ENST00000588687 ZNF318Q5VUA4 2279 aa21.16■□□□□ 0.98
CCDC43-204ENST00000588687 hCG_1642624A0A1W2PR95 340 aa21.15■□□□□ 0.98
CCDC43-204ENST00000588687 C19orf67A6NJJ6 358 aa21.15■□□□□ 0.98
CCDC43-204ENST00000588687 ENPP3O14638 875 aa21.15■□□□□ 0.98
CCDC43-204ENST00000588687 RB1P06400 928 aa21.15■□□□□ 0.98
CCDC43-204ENST00000588687 HYAL1Q12794 435 aa21.15■□□□□ 0.98
CCDC43-204ENST00000588687 CAMK1Q14012 370 aa21.15■□□□□ 0.98
CCDC43-204ENST00000588687 TSHZ1Q6ZSZ6 1077 aa21.15■□□□□ 0.98
CCDC43-204ENST00000588687 DNAJB3Q8WWF6 145 aa21.15■□□□□ 0.98
CCDC43-204ENST00000588687 TMEM87BQ96K49 555 aa21.15■□□□□ 0.98
CCDC43-204ENST00000588687 C11orf84Q9BUA3 381 aaPredicted RBP21.15■□□□□ 0.98
CCDC43-204ENST00000588687 LMAN2LQ9H0V9 348 aa21.15■□□□□ 0.98
CCDC43-204ENST00000588687 JADE2Q9NQC1 790 aa21.15■□□□□ 0.98
CCDC43-204ENST00000588687 CDY2AQ9Y6F7 541 aa21.15■□□□□ 0.98
CCDC43-204ENST00000588687 DGKIO75912 1065 aa21.14■□□□□ 0.97
CCDC43-204ENST00000588687 SSTR3P32745 418 aaPredicted RBP21.14■□□□□ 0.97
CCDC43-204ENST00000588687 LIFRP42702 1097 aa21.14■□□□□ 0.97
CCDC43-204ENST00000588687 GNAQP50148 359 aa21.14■□□□□ 0.97
CCDC43-204ENST00000588687 DLX2Q07687 328 aaPredicted RBP21.14■□□□□ 0.97
CCDC43-204ENST00000588687 CASC1Q6TDU7 716 aa21.14■□□□□ 0.97
CCDC43-204ENST00000588687 TMTC3Q6ZXV5 915 aa21.14■□□□□ 0.97
CCDC43-204ENST00000588687 CLDND1Q9NY35 253 aa21.14■□□□□ 0.97
CCDC43-204ENST00000588687 PKD2L1Q9P0L9 805 aa21.14■□□□□ 0.97
CCDC43-204ENST00000588687 RWDD3Q9Y3V2 267 aa21.14■□□□□ 0.97
CCDC43-204ENST00000588687 TBX10O75333 385 aa21.13■□□□□ 0.97
CCDC43-204ENST00000588687 MMP1P03956 469 aa21.13■□□□□ 0.97
CCDC43-204ENST00000588687 MCM5P33992 734 aa21.13■□□□□ 0.97
CCDC43-204ENST00000588687 MRPS6P82932 125 aaKnown RBP21.13■□□□□ 0.97
CCDC43-204ENST00000588687 TYW1BQ6NUM6 668 aa21.13■□□□□ 0.97
CCDC43-204ENST00000588687 RAB11FIP4Q86YS3 637 aa21.13■□□□□ 0.97
CCDC43-204ENST00000588687 SMARCAD1Q9H4L7 1026 aa21.13■□□□□ 0.97
CCDC43-204ENST00000588687 PRKAG3Q9UGI9 489 aa21.13■□□□□ 0.97
CCDC43-204ENST00000588687 PCDHA6Q9UN73 950 aa21.13■□□□□ 0.97
CCDC43-204ENST00000588687 PCDHA8Q9Y5H6 950 aa21.13■□□□□ 0.97
CCDC43-204ENST00000588687 CNTNAP5Q8WYK1 1306 aa21.12■□□□□ 0.97
CCDC43-204ENST00000588687 SLC27A2O14975 620 aa21.12■□□□□ 0.97
CCDC43-204ENST00000588687 INSRRP14616 1297 aa21.12■□□□□ 0.97
CCDC43-204ENST00000588687 CD52P31358 61 aa21.12■□□□□ 0.97
CCDC43-204ENST00000588687 RSPH3Q86UC2 560 aa21.12■□□□□ 0.97
CCDC43-204ENST00000588687 RTN4RL1Q86UN2 441 aaPredicted RBP21.12■□□□□ 0.97
CCDC43-204ENST00000588687 ADHFE1Q8IWW8 467 aa21.12■□□□□ 0.97
CCDC43-204ENST00000588687 TMTC2Q8N394 836 aa21.12■□□□□ 0.97
CCDC43-204ENST00000588687 GLG1Q92896 1179 aa21.12■□□□□ 0.97
CCDC43-204ENST00000588687 JPH1Q9HDC5 661 aaPredicted RBP21.12■□□□□ 0.97
CCDC43-204ENST00000588687 PLXNA4Q9HCM2 1894 aa21.11■□□□□ 0.97
CCDC43-204ENST00000588687 CCDC69A6NI79 296 aa21.11■□□□□ 0.97
CCDC43-204ENST00000588687 MAFGO15525 162 aa21.11■□□□□ 0.97
CCDC43-204ENST00000588687 CALM1P0DP23 149 aa21.11■□□□□ 0.97
CCDC43-204ENST00000588687 CALM2P0DP24 149 aa21.11■□□□□ 0.97
CCDC43-204ENST00000588687 CALM3P0DP25 149 aa21.11■□□□□ 0.97
CCDC43-204ENST00000588687 ALADP13716 330 aa21.11■□□□□ 0.97
CCDC43-204ENST00000588687 GTF2F1P35269 517 aaKnown RBP eCLIP21.11■□□□□ 0.97
CCDC43-204ENST00000588687 SMAD2Q15796 467 aaKnown RBP21.11■□□□□ 0.97
CCDC43-204ENST00000588687 NFXL1Q6ZNB6 911 aa21.11■□□□□ 0.97
CCDC43-204ENST00000588687 SGMS1Q86VZ5 419 aa21.11■□□□□ 0.97
CCDC43-204ENST00000588687 CYP2W1Q8TAV3 490 aa21.11■□□□□ 0.97
CCDC43-204ENST00000588687 KCNH7Q9NS40 1196 aa21.11■□□□□ 0.97
CCDC43-204ENST00000588687 MRPL42Q9Y6G3 142 aaKnown RBP21.11■□□□□ 0.97
CCDC43-204ENST00000588687 SQORQ9Y6N5 450 aa21.11■□□□□ 0.97
CCDC43-204ENST00000588687 IGSF9BQ9UPX0 1349 aa21.1■□□□□ 0.97
CCDC43-204ENST00000588687 SPDYE3A6NKU9 549 aa21.1■□□□□ 0.97
CCDC43-204ENST00000588687 DCXO43602 365 aa21.1■□□□□ 0.97
CCDC43-204ENST00000588687 NCK2O43639 380 aa21.1■□□□□ 0.97
CCDC43-204ENST00000588687 DNAJB1P25685 340 aa21.1■□□□□ 0.97
CCDC43-204ENST00000588687 IGBP1P78318 339 aa21.1■□□□□ 0.97
CCDC43-204ENST00000588687 FUT2Q10981 343 aa21.1■□□□□ 0.97
CCDC43-204ENST00000588687 BTG3Q14201 252 aaPredicted RBP21.1■□□□□ 0.97
CCDC43-204ENST00000588687 NECTIN1Q15223 517 aa21.1■□□□□ 0.97
CCDC43-204ENST00000588687 WWC2Q6AWC2 1192 aa21.1■□□□□ 0.97
CCDC43-204ENST00000588687 FANCBQ8NB91 859 aa21.1■□□□□ 0.97
CCDC43-204ENST00000588687 TRAPPC12Q8WVT3 735 aa21.1■□□□□ 0.97
CCDC43-204ENST00000588687 PLVAPQ9BX97 442 aa21.1■□□□□ 0.97
CCDC43-204ENST00000588687 LRRC2Q9BYS8 371 aa21.1■□□□□ 0.97
CCDC43-204ENST00000588687 FAM49AQ9H0Q0 323 aaPredicted RBP21.1■□□□□ 0.97
CCDC43-204ENST00000588687 SLC9A2Q9UBY0 812 aa21.1■□□□□ 0.97
CCDC43-204ENST00000588687 NFASCO94856 1347 aa21.09■□□□□ 0.97
CCDC43-204ENST00000588687 RRN3P2A6NIE6 340 aa21.09■□□□□ 0.97
CCDC43-204ENST00000588687 MBTPS2O43462 519 aa21.09■□□□□ 0.97
CCDC43-204ENST00000588687 RPLP2P05387 115 aaKnown RBP21.09■□□□□ 0.97
CCDC43-204ENST00000588687 IRS1P35568 1242 aa21.09■□□□□ 0.97
CCDC43-204ENST00000588687 ITGB3BPQ13352 177 aaPredicted RBP21.09■□□□□ 0.97
CCDC43-204ENST00000588687 PLCB4Q15147 1175 aa21.09■□□□□ 0.97
CCDC43-204ENST00000588687 CREB3L3Q68CJ9 461 aa21.09■□□□□ 0.97
CCDC43-204ENST00000588687 HEATR3Q7Z4Q2 680 aa21.09■□□□□ 0.97
CCDC43-204ENST00000588687 CMTR2Q8IYT2 770 aaKnown RBP21.09■□□□□ 0.97
CCDC43-204ENST00000588687 CCDC82Q8N4S0 544 aa21.09■□□□□ 0.97
CCDC43-204ENST00000588687 P2RX5Q93086 422 aa21.09■□□□□ 0.97
CCDC43-204ENST00000588687 MXRA8Q9BRK3 442 aa21.09■□□□□ 0.97
CCDC43-204ENST00000588687 PLAGL2Q9UPG8 496 aa21.09■□□□□ 0.97
CCDC43-204ENST00000588687 FAM50BQ9Y247 325 aa21.09■□□□□ 0.97
CCDC43-204ENST00000588687 TRPV2Q9Y5S1 764 aa21.09■□□□□ 0.97
CCDC43-204ENST00000588687 FNDC1Q4ZHG4 1894 aaPredicted RBP21.09■□□□□ 0.97
CCDC43-204ENST00000588687 KDM3AQ9Y4C1 1321 aa21.08■□□□□ 0.97
CCDC43-204ENST00000588687 LINC01565O15544 149 aa21.08■□□□□ 0.97
CCDC43-204ENST00000588687 TECTAO75443 2155 aa21.08■□□□□ 0.97
CCDC43-204ENST00000588687 ACTR2P61160 394 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms