RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 ATP2B1P20020 1258 aa22.81■■□□□ 1.24
DDX39A-207ENST00000588542 TOB1P50616 345 aaPredicted RBP22.81■■□□□ 1.24
DDX39A-207ENST00000588542 ADAM17P78536 824 aa22.81■■□□□ 1.24
DDX39A-207ENST00000588542 PLCB4Q15147 1175 aa22.81■■□□□ 1.24
DDX39A-207ENST00000588542 MCTP1Q6DN14 999 aa22.81■■□□□ 1.24
DDX39A-207ENST00000588542 SWSAP1Q6NVH7 229 aa22.81■■□□□ 1.24
DDX39A-207ENST00000588542 BADQ92934 168 aa22.81■■□□□ 1.24
DDX39A-207ENST00000588542 ZNF302Q9NR11 478 aa22.81■■□□□ 1.24
DDX39A-207ENST00000588542 DISC1Q9NRI5 854 aa22.81■■□□□ 1.24
DDX39A-207ENST00000588542 SETD4Q9NVD3 440 aa22.81■■□□□ 1.24
DDX39A-207ENST00000588542 TCEAL9Q9UHQ7 104 aa22.81■■□□□ 1.24
DDX39A-207ENST00000588542 C17orf102A2RUQ5 167 aa22.8■■□□□ 1.24
DDX39A-207ENST00000588542 BACH1O14867 736 aa22.8■■□□□ 1.24
DDX39A-207ENST00000588542 NEMFO60524 1076 aa22.8■■□□□ 1.24
DDX39A-207ENST00000588542 PSAPP07602 524 aa22.8■■□□□ 1.24
DDX39A-207ENST00000588542 ATP4AP20648 1035 aa22.8■■□□□ 1.24
DDX39A-207ENST00000588542 PPP2R5CQ13362 524 aa22.8■■□□□ 1.24
DDX39A-207ENST00000588542 FAM160B1Q5W0V3 765 aa22.8■■□□□ 1.24
DDX39A-207ENST00000588542 DHX38Q92620 1227 aaKnown RBP22.8■■□□□ 1.24
DDX39A-207ENST00000588542 MTMR9Q96QG7 549 aa22.8■■□□□ 1.24
DDX39A-207ENST00000588542 PPP1R12CQ9BZL4 782 aa22.8■■□□□ 1.24
DDX39A-207ENST00000588542 TMEM60Q9H2L4 133 aa22.8■■□□□ 1.24
DDX39A-207ENST00000588542 HIPK3Q9H422 1215 aa22.8■■□□□ 1.24
DDX39A-207ENST00000588542 MAFBQ9Y5Q3 323 aaPredicted RBP22.8■■□□□ 1.24
DDX39A-207ENST00000588542 SFNP31947 248 aa22.79■■□□□ 1.24
DDX39A-207ENST00000588542 CYP2C18P33260 490 aa22.79■■□□□ 1.24
DDX39A-207ENST00000588542 MCM7P33993 719 aa22.79■■□□□ 1.24
DDX39A-207ENST00000588542 TRAPPC10P48553 1259 aa22.79■■□□□ 1.24
DDX39A-207ENST00000588542 SLC26A2P50443 739 aa22.79■■□□□ 1.24
DDX39A-207ENST00000588542 JAK3P52333 1124 aa22.79■■□□□ 1.24
DDX39A-207ENST00000588542 SPIRE1Q08AE8 756 aa22.79■■□□□ 1.24
DDX39A-207ENST00000588542 NBR1Q14596 966 aa22.79■■□□□ 1.24
DDX39A-207ENST00000588542 CALCRLQ16602 461 aa22.79■■□□□ 1.24
DDX39A-207ENST00000588542 TTC38Q5R3I4 469 aa22.79■■□□□ 1.24
DDX39A-207ENST00000588542 CHRDL2Q6WN34 429 aa22.79■■□□□ 1.24
DDX39A-207ENST00000588542 SLFN12Q8IYM2 578 aa22.79■■□□□ 1.24
DDX39A-207ENST00000588542 RDM1Q8NG50 284 aa22.79■■□□□ 1.24
DDX39A-207ENST00000588542 LMBR1Q8WVP7 490 aa22.79■■□□□ 1.24
DDX39A-207ENST00000588542 WNT8BQ93098 351 aa22.79■■□□□ 1.24
DDX39A-207ENST00000588542 LBHD1Q9BQE6 289 aaPredicted RBP22.79■■□□□ 1.24
DDX39A-207ENST00000588542 GABBR1Q9UBS5 961 aa22.79■■□□□ 1.24
DDX39A-207ENST00000588542 NOD1Q9Y239 953 aa22.79■■□□□ 1.24
DDX39A-207ENST00000588542 SAMM50Q9Y512 469 aa22.79■■□□□ 1.24
DDX39A-207ENST00000588542 NRCAMQ92823 1304 aa22.79■■□□□ 1.24
DDX39A-207ENST00000588542 IGSF9BQ9UPX0 1349 aa22.79■■□□□ 1.24
DDX39A-207ENST00000588542 EVPLQ92817 2033 aa22.79■■□□□ 1.24
DDX39A-207ENST00000588542 EML1O00423 815 aa22.78■■□□□ 1.24
DDX39A-207ENST00000588542 TREHO43280 583 aa22.78■■□□□ 1.24
DDX39A-207ENST00000588542 BAG4O95429 457 aaKnown RBP22.78■■□□□ 1.24
DDX39A-207ENST00000588542 PDCP20941 246 aa22.78■■□□□ 1.24
DDX39A-207ENST00000588542 PTK7Q13308 1070 aa22.78■■□□□ 1.24
DDX39A-207ENST00000588542 ORC2Q13416 577 aaPredicted RBP22.78■■□□□ 1.24
DDX39A-207ENST00000588542 ZNF174Q15697 407 aa22.78■■□□□ 1.24
DDX39A-207ENST00000588542 MFSD5Q6N075 450 aa22.78■■□□□ 1.24
DDX39A-207ENST00000588542 PDXDC2PQ6P474 469 aa22.78■■□□□ 1.24
DDX39A-207ENST00000588542 MIER3Q7Z3K6 550 aa22.78■■□□□ 1.24
DDX39A-207ENST00000588542 ATP6V0A1Q93050 837 aa22.78■■□□□ 1.24
DDX39A-207ENST00000588542 WNT8AQ9H1J5 351 aa22.78■■□□□ 1.24
DDX39A-207ENST00000588542 NOL7Q9UMY1 257 aaKnown RBP22.78■■□□□ 1.24
DDX39A-207ENST00000588542 ZNF862O60290 1169 aa22.77■■□□□ 1.24
DDX39A-207ENST00000588542 MARCH6O60337 910 aa22.77■■□□□ 1.24
DDX39A-207ENST00000588542 INSRRP14616 1297 aa22.77■■□□□ 1.24
DDX39A-207ENST00000588542 SYT1P21579 422 aa22.77■■□□□ 1.24
DDX39A-207ENST00000588542 BMP8BP34820 402 aa22.77■■□□□ 1.24
DDX39A-207ENST00000588542 PPFIA1Q13136 1202 aa22.77■■□□□ 1.24
DDX39A-207ENST00000588542 GRIK4Q16099 956 aa22.77■■□□□ 1.24
DDX39A-207ENST00000588542 UGCGQ16739 394 aa22.77■■□□□ 1.24
DDX39A-207ENST00000588542 TRIM71Q2Q1W2 868 aaKnown RBP22.77■■□□□ 1.24
DDX39A-207ENST00000588542 MARCH8Q5T0T0 291 aa22.77■■□□□ 1.24
DDX39A-207ENST00000588542 SERINC5Q86VE9 423 aa22.77■■□□□ 1.24
DDX39A-207ENST00000588542 COLQQ9Y215 455 aaPredicted RBP22.77■■□□□ 1.24
DDX39A-207ENST00000588542 POTEB3A0JP26 581 aa22.76■■□□□ 1.23
DDX39A-207ENST00000588542 GNAT1P11488 350 aa22.76■■□□□ 1.23
DDX39A-207ENST00000588542 RBL2Q08999 1139 aa22.76■■□□□ 1.23
DDX39A-207ENST00000588542 POTEBQ6S5H4 581 aa22.76■■□□□ 1.23
DDX39A-207ENST00000588542 C4orf32Q8N8J7 132 aa22.76■■□□□ 1.23
DDX39A-207ENST00000588542 ATP8B4Q8TF62 1192 aa22.76■■□□□ 1.23
DDX39A-207ENST00000588542 TRPC6Q9Y210 931 aa22.76■■□□□ 1.23
DDX39A-207ENST00000588542 PCDHB6Q9Y5E3 794 aa22.76■■□□□ 1.23
DDX39A-207ENST00000588542 SIP14410 1827 aa22.75■■□□□ 1.23
DDX39A-207ENST00000588542 MYH15Q9Y2K3 1946 aa22.75■■□□□ 1.23
DDX39A-207ENST00000588542 VPS37CA5D8V6 355 aaPredicted RBP22.75■■□□□ 1.23
DDX39A-207ENST00000588542 PITPNM1O00562 1244 aa22.75■■□□□ 1.23
DDX39A-207ENST00000588542 CCL23P55773 120 aa22.75■■□□□ 1.23
DDX39A-207ENST00000588542 CAGE1Q8TC20 777 aa22.75■■□□□ 1.23
DDX39A-207ENST00000588542 PCDHA12Q9UN75 941 aa22.75■■□□□ 1.23
DDX39A-207ENST00000588542 TET1Q8NFU7 2136 aa22.75■■□□□ 1.23
DDX39A-207ENST00000588542 MBLAC1A4D2B0 266 aaPredicted RBP22.74■■□□□ 1.23
DDX39A-207ENST00000588542 RRN3P2A6NIE6 340 aa22.74■■□□□ 1.23
DDX39A-207ENST00000588542 ZBTB42B2RXF5 422 aa22.74■■□□□ 1.23
DDX39A-207ENST00000588542 HBP1O60381 514 aa22.74■■□□□ 1.23
DDX39A-207ENST00000588542 CSF2RAP15509 400 aa22.74■■□□□ 1.23
DDX39A-207ENST00000588542 TXKP42681 527 aa22.74■■□□□ 1.23
DDX39A-207ENST00000588542 EPHB4P54760 987 aa22.74■■□□□ 1.23
DDX39A-207ENST00000588542 FPGSQ05932 587 aa22.74■■□□□ 1.23
DDX39A-207ENST00000588542 BFSP2Q13515 415 aa22.74■■□□□ 1.23
DDX39A-207ENST00000588542 TRAPPC12Q8WVT3 735 aa22.74■■□□□ 1.23
DDX39A-207ENST00000588542 SCLYQ96I15 445 aa22.74■■□□□ 1.23
DDX39A-207ENST00000588542 TTC12Q9H892 705 aaPredicted RBP22.74■■□□□ 1.23
DDX39A-207ENST00000588542 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms