RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 MTMR1Q13613 665 aa16.13■□□□□ 0.17
DNMT1-213ENST00000587604 FBXO47Q5MNV8 452 aa16.13■□□□□ 0.17
DNMT1-213ENST00000587604 EP400NLQ6ZTU2 488 aa16.13■□□□□ 0.17
DNMT1-213ENST00000587604 CMTR1Q8N1G2 835 aaKnown RBP16.13■□□□□ 0.17
DNMT1-213ENST00000587604 DNAJB3Q8WWF6 145 aa16.13■□□□□ 0.17
DNMT1-213ENST00000587604 CLP1Q92989 425 aaKnown RBP16.13■□□□□ 0.17
DNMT1-213ENST00000587604 ZNF689Q96CS4 500 aaPredicted RBP16.13■□□□□ 0.17
DNMT1-213ENST00000587604 RC3H2Q9HBD1 1191 aaKnown RBP16.13■□□□□ 0.17
DNMT1-213ENST00000587604 JADE2Q9NQC1 790 aa16.13■□□□□ 0.17
DNMT1-213ENST00000587604 PRKAG3Q9UGI9 489 aa16.13■□□□□ 0.17
DNMT1-213ENST00000587604 ATG2AQ2TAZ0 1938 aa16.13■□□□□ 0.17
DNMT1-213ENST00000587604 LOXHD1Q8IVV2 1947 aa16.12■□□□□ 0.17
DNMT1-213ENST00000587604 SPDYE3A6NKU9 549 aa16.12■□□□□ 0.17
DNMT1-213ENST00000587604 SH2B2O14492 632 aaPredicted RBP16.12■□□□□ 0.17
DNMT1-213ENST00000587604 GRM6O15303 877 aa16.12■□□□□ 0.17
DNMT1-213ENST00000587604 CTC1Q2NKJ3 1217 aa16.12■□□□□ 0.17
DNMT1-213ENST00000587604 TSHZ1Q6ZSZ6 1077 aa16.12■□□□□ 0.17
DNMT1-213ENST00000587604 CLDND1Q9NY35 253 aa16.12■□□□□ 0.17
DNMT1-213ENST00000587604 PCDHA6Q9UN73 950 aa16.12■□□□□ 0.17
DNMT1-213ENST00000587604 PCDHA8Q9Y5H6 950 aa16.12■□□□□ 0.17
DNMT1-213ENST00000587604 CDY2AQ9Y6F7 541 aa16.12■□□□□ 0.17
DNMT1-213ENST00000587604 ADGRA3Q8IWK6 1321 aa16.12■□□□□ 0.17
DNMT1-213ENST00000587604 C5orf42Q9H799 3197 aa16.11■□□□□ 0.17
DNMT1-213ENST00000587604 POTEB3A0JP26 581 aa16.11■□□□□ 0.17
DNMT1-213ENST00000587604 RRN3P2A6NIE6 340 aa16.11■□□□□ 0.17
DNMT1-213ENST00000587604 DGKIO75912 1065 aa16.11■□□□□ 0.17
DNMT1-213ENST00000587604 RXRAP19793 462 aa16.11■□□□□ 0.17
DNMT1-213ENST00000587604 LTBRP36941 435 aa16.11■□□□□ 0.17
DNMT1-213ENST00000587604 MRPS6P82932 125 aaKnown RBP16.11■□□□□ 0.17
DNMT1-213ENST00000587604 BTG3Q14201 252 aaPredicted RBP16.11■□□□□ 0.17
DNMT1-213ENST00000587604 UBE2SQ16763 222 aa16.11■□□□□ 0.17
DNMT1-213ENST00000587604 IER5Q5VY09 327 aa16.11■□□□□ 0.17
DNMT1-213ENST00000587604 POTEBQ6S5H4 581 aa16.11■□□□□ 0.17
DNMT1-213ENST00000587604 TNPO1Q92973 898 aaKnown RBP16.11■□□□□ 0.17
DNMT1-213ENST00000587604 PLVAPQ9BX97 442 aa16.11■□□□□ 0.17
DNMT1-213ENST00000587604 AGO3Q9H9G7 860 aaKnown RBP16.11■□□□□ 0.17
DNMT1-213ENST00000587604 PKD2L1Q9P0L9 805 aa16.11■□□□□ 0.17
DNMT1-213ENST00000587604 SLC12A7Q9Y666 1083 aa16.11■□□□□ 0.17
DNMT1-213ENST00000587604 SQORQ9Y6N5 450 aa16.11■□□□□ 0.17
DNMT1-213ENST00000587604 C19orf67A6NJJ6 358 aa16.1■□□□□ 0.17
DNMT1-213ENST00000587604 INSRRP14616 1297 aa16.1■□□□□ 0.17
DNMT1-213ENST00000587604 IGBP1P78318 339 aa16.1■□□□□ 0.17
DNMT1-213ENST00000587604 ZP2Q05996 745 aa16.1■□□□□ 0.17
DNMT1-213ENST00000587604 ADHFE1Q8IWW8 467 aa16.1■□□□□ 0.17
DNMT1-213ENST00000587604 CCDC82Q8N4S0 544 aa16.1■□□□□ 0.17
DNMT1-213ENST00000587604 FANCBQ8NB91 859 aa16.1■□□□□ 0.17
DNMT1-213ENST00000587604 PCYT2Q99447 389 aa16.1■□□□□ 0.17
DNMT1-213ENST00000587604 FTHL17Q9BXU8 183 aa16.1■□□□□ 0.17
DNMT1-213ENST00000587604 JPH1Q9HDC5 661 aaPredicted RBP16.1■□□□□ 0.17
DNMT1-213ENST00000587604 hCG_1642624A0A1W2PR95 340 aa16.09■□□□□ 0.17
DNMT1-213ENST00000587604 DCXO43602 365 aa16.09■□□□□ 0.17
DNMT1-213ENST00000587604 HYAL1Q12794 435 aa16.09■□□□□ 0.17
DNMT1-213ENST00000587604 COL9A3Q14050 684 aaPredicted RBP16.09■□□□□ 0.17
DNMT1-213ENST00000587604 CSPP1Q1MSJ5 1256 aa16.09■□□□□ 0.17
DNMT1-213ENST00000587604 TMTC3Q6ZXV5 915 aa16.09■□□□□ 0.17
DNMT1-213ENST00000587604 RTN4RL1Q86UN2 441 aaPredicted RBP16.09■□□□□ 0.17
DNMT1-213ENST00000587604 CRIPAKQ8N1N5 446 aa16.09■□□□□ 0.17
DNMT1-213ENST00000587604 MXRA8Q9BRK3 442 aa16.09■□□□□ 0.17
DNMT1-213ENST00000587604 LSG1Q9H089 658 aaKnown RBP16.09■□□□□ 0.17
DNMT1-213ENST00000587604 FAM49AQ9H0Q0 323 aaPredicted RBP16.09■□□□□ 0.17
DNMT1-213ENST00000587604 AZI2Q9H6S1 392 aa16.09■□□□□ 0.17
DNMT1-213ENST00000587604 KCNH7Q9NS40 1196 aa16.09■□□□□ 0.17
DNMT1-213ENST00000587604 SLC9A2Q9UBY0 812 aa16.09■□□□□ 0.17
DNMT1-213ENST00000587604 PLAGL2Q9UPG8 496 aa16.09■□□□□ 0.17
DNMT1-213ENST00000587604 PCDHA2Q9Y5H9 948 aa16.09■□□□□ 0.17
DNMT1-213ENST00000587604 M0QZ92 97 aa16.08■□□□□ 0.16
DNMT1-213ENST00000587604 SLC27A2O14975 620 aa16.08■□□□□ 0.16
DNMT1-213ENST00000587604 MMP1P03956 469 aa16.08■□□□□ 0.16
DNMT1-213ENST00000587604 CD52P31358 61 aa16.08■□□□□ 0.16
DNMT1-213ENST00000587604 DLX2Q07687 328 aaPredicted RBP16.08■□□□□ 0.16
DNMT1-213ENST00000587604 SMAD2Q15796 467 aaKnown RBP16.08■□□□□ 0.16
DNMT1-213ENST00000587604 NAALADL2Q58DX5 795 aa16.08■□□□□ 0.16
DNMT1-213ENST00000587604 PLPPR4Q7Z2D5 763 aa16.08■□□□□ 0.16
DNMT1-213ENST00000587604 HEATR3Q7Z4Q2 680 aa16.08■□□□□ 0.16
DNMT1-213ENST00000587604 TEX2Q8IWB9 1127 aa16.08■□□□□ 0.16
DNMT1-213ENST00000587604 LINC01599Q8WXQ3 324 aa16.08■□□□□ 0.16
DNMT1-213ENST00000587604 P2RX5Q93086 422 aa16.08■□□□□ 0.16
DNMT1-213ENST00000587604 ZBTB10Q96DT7 871 aa16.08■□□□□ 0.16
DNMT1-213ENST00000587604 UPF3BQ9BZI7 483 aaKnown RBP16.08■□□□□ 0.16
DNMT1-213ENST00000587604 TRPC6Q9Y210 931 aa16.08■□□□□ 0.16
DNMT1-213ENST00000587604 TRIOO75962 3097 aa16.08■□□□□ 0.16
DNMT1-213ENST00000587604 STAT5BP51692 787 aa16.07■□□□□ 0.16
DNMT1-213ENST00000587604 ACTR2P61160 394 aa16.07■□□□□ 0.16
DNMT1-213ENST00000587604 CAMK1Q14012 370 aa16.07■□□□□ 0.16
DNMT1-213ENST00000587604 NECTIN1Q15223 517 aa16.07■□□□□ 0.16
DNMT1-213ENST00000587604 SGMS1Q86VZ5 419 aa16.07■□□□□ 0.16
DNMT1-213ENST00000587604 RAB11FIP4Q86YS3 637 aa16.07■□□□□ 0.16
DNMT1-213ENST00000587604 NPAS4Q8IUM7 802 aa16.07■□□□□ 0.16
DNMT1-213ENST00000587604 CMTR2Q8IYT2 770 aaKnown RBP16.07■□□□□ 0.16
DNMT1-213ENST00000587604 NME8Q8N427 588 aa16.07■□□□□ 0.16
DNMT1-213ENST00000587604 CYP2W1Q8TAV3 490 aa16.07■□□□□ 0.16
DNMT1-213ENST00000587604 UIMC1Q96RL1 719 aa16.07■□□□□ 0.16
DNMT1-213ENST00000587604 SDF4Q9BRK5 362 aa16.07■□□□□ 0.16
DNMT1-213ENST00000587604 CELF4Q9BZC1 486 aaKnown RBP16.07■□□□□ 0.16
DNMT1-213ENST00000587604 ALG13Q9NP73 1137 aaKnown RBP16.07■□□□□ 0.16
DNMT1-213ENST00000587604 PADI3Q9ULW8 664 aa16.07■□□□□ 0.16
DNMT1-213ENST00000587604 TRPV2Q9Y5S1 764 aa16.07■□□□□ 0.16
DNMT1-213ENST00000587604 MRPL42Q9Y6G3 142 aaKnown RBP16.07■□□□□ 0.16
DNMT1-213ENST00000587604 NFASCO94856 1347 aa16.07■□□□□ 0.16
DNMT1-213ENST00000587604 EVPLQ92817 2033 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms