RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 Q3C1V9 767 aa22.04■■□□□ 1.12
TRIM47-204ENST00000587339 CREBRFQ8IUR6 639 aa22.04■■□□□ 1.12
TRIM47-204ENST00000587339 MYOCDQ8IZQ8 938 aa22.04■■□□□ 1.12
TRIM47-204ENST00000587339 GLIS3Q8NEA6 775 aa22.04■■□□□ 1.12
TRIM47-204ENST00000587339 MS4A4AQ96JQ5 239 aa22.04■■□□□ 1.12
TRIM47-204ENST00000587339 SEMA6BQ9H3T3 888 aa22.04■■□□□ 1.12
TRIM47-204ENST00000587339 TBC1D7Q9P0N9 293 aa22.04■■□□□ 1.12
TRIM47-204ENST00000587339 LIMA1Q9UHB6 759 aaKnown RBP22.04■■□□□ 1.12
TRIM47-204ENST00000587339 ASTN1O14525 1302 aa22.04■■□□□ 1.12
TRIM47-204ENST00000587339 LRRC10BA6NIK2 292 aa22.04■■□□□ 1.12
TRIM47-204ENST00000587339 EIF3JO75822 258 aaKnown RBP22.04■■□□□ 1.12
TRIM47-204ENST00000587339 QARSP47897 775 aaKnown RBP22.04■■□□□ 1.12
TRIM47-204ENST00000587339 KRT31Q15323 416 aa22.04■■□□□ 1.12
TRIM47-204ENST00000587339 LRRC8AQ8IWT6 810 aa22.04■■□□□ 1.12
TRIM47-204ENST00000587339 CACTINQ8WUQ7 758 aaKnown RBP22.04■■□□□ 1.12
TRIM47-204ENST00000587339 DUSP9Q99956 384 aaKnown RBP22.04■■□□□ 1.12
TRIM47-204ENST00000587339 PCDHA2Q9Y5H9 948 aa22.04■■□□□ 1.12
TRIM47-204ENST00000587339 CCL15-CCL14A0A0B4J2E2 113 aa22.03■■□□□ 1.12
TRIM47-204ENST00000587339 TBCAO75347 108 aaKnown RBP22.03■■□□□ 1.12
TRIM47-204ENST00000587339 CCNE2O96020 404 aa22.03■■□□□ 1.12
TRIM47-204ENST00000587339 CYP2C8P10632 490 aa22.03■■□□□ 1.12
TRIM47-204ENST00000587339 KCNA2P16389 499 aa22.03■■□□□ 1.12
TRIM47-204ENST00000587339 CCL15Q16663 113 aa22.03■■□□□ 1.12
TRIM47-204ENST00000587339 IRF2BP1Q8IU81 584 aa22.03■■□□□ 1.12
TRIM47-204ENST00000587339 SMCR8Q8TEV9 937 aaPredicted RBP22.03■■□□□ 1.12
TRIM47-204ENST00000587339 ZNF526Q8TF50 670 aaPredicted RBP22.03■■□□□ 1.12
TRIM47-204ENST00000587339 KCND2Q9NZV8 630 aa22.03■■□□□ 1.12
TRIM47-204ENST00000587339 LRMPQ12912 555 aa22.02■■□□□ 1.12
TRIM47-204ENST00000587339 ZNF746Q6NUN9 644 aaPredicted RBP22.02■■□□□ 1.12
TRIM47-204ENST00000587339 C1orf186Q6ZWK4 172 aa22.02■■□□□ 1.12
TRIM47-204ENST00000587339 GTF3C2Q8WUA4 911 aaPredicted RBP22.02■■□□□ 1.12
TRIM47-204ENST00000587339 MAGEC2Q9UBF1 373 aaPredicted RBP22.02■■□□□ 1.12
TRIM47-204ENST00000587339 LCTP09848 1927 aa22.02■■□□□ 1.12
TRIM47-204ENST00000587339 SPATA31C2B4DYI2 1134 aa22.02■■□□□ 1.11
TRIM47-204ENST00000587339 PDHXO00330 501 aa22.02■■□□□ 1.11
TRIM47-204ENST00000587339 KIF20AO95235 890 aa22.02■■□□□ 1.11
TRIM47-204ENST00000587339 EEF1GP26641 437 aaKnown RBP22.02■■□□□ 1.11
TRIM47-204ENST00000587339 ERVK-9P63128 1117 aa22.02■■□□□ 1.11
TRIM47-204ENST00000587339 ERVK-24P63145 666 aa22.02■■□□□ 1.11
TRIM47-204ENST00000587339 LRRC63Q05C16 580 aa22.02■■□□□ 1.11
TRIM47-204ENST00000587339 ARID5BQ14865 1188 aa22.02■■□□□ 1.11
TRIM47-204ENST00000587339 PTPN21Q16825 1174 aa22.02■■□□□ 1.11
TRIM47-204ENST00000587339 FAM133AQ8N9E0 248 aa22.02■■□□□ 1.11
TRIM47-204ENST00000587339 RDM1Q8NG50 284 aa22.02■■□□□ 1.11
TRIM47-204ENST00000587339 R3HDMLQ9H3Y0 253 aa22.02■■□□□ 1.11
TRIM47-204ENST00000587339 MROH8Q9H579 483 aa22.02■■□□□ 1.11
TRIM47-204ENST00000587339 SLC45A1Q9Y2W3 748 aa22.02■■□□□ 1.11
TRIM47-204ENST00000587339 COL4A3BPQ9Y5P4 624 aa22.02■■□□□ 1.11
TRIM47-204ENST00000587339 ARHGEF35A5YM69 484 aa22.01■■□□□ 1.11
TRIM47-204ENST00000587339 SOWAHBA6NEL2 793 aa22.01■■□□□ 1.11
TRIM47-204ENST00000587339 KCTD2Q14681 263 aa22.01■■□□□ 1.11
TRIM47-204ENST00000587339 SPECC1LQ69YQ0 1117 aa22.01■■□□□ 1.11
TRIM47-204ENST00000587339 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.01■■□□□ 1.11
TRIM47-204ENST00000587339 SFR1Q86XK3 245 aa22.01■■□□□ 1.11
TRIM47-204ENST00000587339 EEF2KMTQ96G04 330 aa22.01■■□□□ 1.11
TRIM47-204ENST00000587339 SENP7Q9BQF6 1050 aa22.01■■□□□ 1.11
TRIM47-204ENST00000587339 FGFBP2Q9BYJ0 223 aa22.01■■□□□ 1.11
TRIM47-204ENST00000587339 RTN4Q9NQC3 1192 aaKnown RBP22.01■■□□□ 1.11
TRIM47-204ENST00000587339 NFASCO94856 1347 aa22.01■■□□□ 1.11
TRIM47-204ENST00000587339 DCAF8L1A6NGE4 600 aa22■■□□□ 1.11
TRIM47-204ENST00000587339 RSPH10B2B2RC85 870 aa22■■□□□ 1.11
TRIM47-204ENST00000587339 BTBD19C9JJ37 291 aa22■■□□□ 1.11
TRIM47-204ENST00000587339 N4BP3O15049 544 aa22■■□□□ 1.11
TRIM47-204ENST00000587339 LYPLA2O95372 231 aa22■■□□□ 1.11
TRIM47-204ENST00000587339 RSPH10BP0C881 870 aa22■■□□□ 1.11
TRIM47-204ENST00000587339 ZBTB48P10074 688 aaPredicted RBP22■■□□□ 1.11
TRIM47-204ENST00000587339 PSMC5P62195 406 aa22■■□□□ 1.11
TRIM47-204ENST00000587339 FSTL1Q12841 308 aa22■■□□□ 1.11
TRIM47-204ENST00000587339 WDR78Q5VTH9 848 aa22■■□□□ 1.11
TRIM47-204ENST00000587339 FAM114A1Q8IWE2 563 aa22■■□□□ 1.11
TRIM47-204ENST00000587339 SMAP1Q8IYB5 467 aaPredicted RBP22■■□□□ 1.11
TRIM47-204ENST00000587339 BRI3BPQ8WY22 251 aa22■■□□□ 1.11
TRIM47-204ENST00000587339 JPH1Q9HDC5 661 aaPredicted RBP22■■□□□ 1.11
TRIM47-204ENST00000587339 PCDHA10Q9Y5I2 948 aa22■■□□□ 1.11
TRIM47-204ENST00000587339 B4DLN1 442 aa22■■□□□ 1.11
TRIM47-204ENST00000587339 TEX33O43247 280 aa22■■□□□ 1.11
TRIM47-204ENST00000587339 EDNRBP24530 442 aa22■■□□□ 1.11
TRIM47-204ENST00000587339 COPB1P53618 953 aaKnown RBP22■■□□□ 1.11
TRIM47-204ENST00000587339 SPRYD7Q5W111 196 aa22■■□□□ 1.11
TRIM47-204ENST00000587339 FOXR2Q6PJQ5 311 aa22■■□□□ 1.11
TRIM47-204ENST00000587339 C4orf19Q8IY42 314 aa22■■□□□ 1.11
TRIM47-204ENST00000587339 CCDC150Q8NCX0 1101 aa22■■□□□ 1.11
TRIM47-204ENST00000587339 TSG101Q99816 390 aa22■■□□□ 1.11
TRIM47-204ENST00000587339 VPS16Q9H269 839 aa22■■□□□ 1.11
TRIM47-204ENST00000587339 TAB2Q9NYJ8 693 aa22■■□□□ 1.11
TRIM47-204ENST00000587339 ZNF500O60304 480 aaPredicted RBP21.99■■□□□ 1.11
TRIM47-204ENST00000587339 FAM13AO94988 1023 aa21.99■■□□□ 1.11
TRIM47-204ENST00000587339 GAP43P17677 238 aa21.99■■□□□ 1.11
TRIM47-204ENST00000587339 SFPQP23246 707 aaKnown RBP eCLIP21.99■■□□□ 1.11
TRIM47-204ENST00000587339 YWHABP31946 246 aaKnown RBP21.99■■□□□ 1.11
TRIM47-204ENST00000587339 ICAM3P32942 547 aa21.99■■□□□ 1.11
TRIM47-204ENST00000587339 CST9Q5W186 159 aa21.99■■□□□ 1.11
TRIM47-204ENST00000587339 ANKRD23Q86SG2 305 aa21.99■■□□□ 1.11
TRIM47-204ENST00000587339 SCFD1Q8WVM8 642 aa21.99■■□□□ 1.11
TRIM47-204ENST00000587339 MMP19Q99542 508 aa21.99■■□□□ 1.11
TRIM47-204ENST00000587339 MPHOSPH6Q99547 160 aaKnown RBP21.99■■□□□ 1.11
TRIM47-204ENST00000587339 SLC9A2Q9UBY0 812 aa21.99■■□□□ 1.11
TRIM47-204ENST00000587339 DBR1Q9UK59 544 aaKnown RBP21.99■■□□□ 1.11
TRIM47-204ENST00000587339 FGFR1OPO95684 399 aaKnown RBP21.98■■□□□ 1.11
TRIM47-204ENST00000587339 PGK2P07205 417 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms