RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 ZKSCAN5Q9Y2L8 839 aa22.79■■□□□ 1.24
ATG4D-204ENST00000586417 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.79■■□□□ 1.24
ATG4D-204ENST00000586417 HTTP42858 3142 aa22.79■■□□□ 1.24
ATG4D-204ENST00000586417 ZNF236Q9UL36 1845 aa22.79■■□□□ 1.24
ATG4D-204ENST00000586417 EHHADHQ08426 723 aa22.78■■□□□ 1.24
ATG4D-204ENST00000586417 STK4Q13043 487 aa22.78■■□□□ 1.24
ATG4D-204ENST00000586417 CDKAL1Q5VV42 579 aa22.78■■□□□ 1.24
ATG4D-204ENST00000586417 DYMQ7RTS9 669 aa22.78■■□□□ 1.24
ATG4D-204ENST00000586417 DPP9Q86TI2 863 aa22.78■■□□□ 1.24
ATG4D-204ENST00000586417 NELFBQ8WX92 580 aa22.78■■□□□ 1.24
ATG4D-204ENST00000586417 WBP1LQ9NX94 342 aa22.78■■□□□ 1.24
ATG4D-204ENST00000586417 SLC12A3P55017 1021 aa22.78■■□□□ 1.24
ATG4D-204ENST00000586417 PSMC6P62333 389 aa22.78■■□□□ 1.24
ATG4D-204ENST00000586417 COBLL1Q53SF7 1204 aa22.78■■□□□ 1.24
ATG4D-204ENST00000586417 HSP90AA4PQ58FG1 418 aa22.78■■□□□ 1.24
ATG4D-204ENST00000586417 VSIG10LQ86VR7 867 aa22.78■■□□□ 1.24
ATG4D-204ENST00000586417 NPLOC4Q8TAT6 608 aa22.78■■□□□ 1.24
ATG4D-204ENST00000586417 CD99L2Q8TCZ2 262 aa22.78■■□□□ 1.24
ATG4D-204ENST00000586417 GTPBP4Q9BZE4 634 aaKnown RBP22.78■■□□□ 1.24
ATG4D-204ENST00000586417 UNC45AQ9H3U1 944 aa22.78■■□□□ 1.24
ATG4D-204ENST00000586417 ADD3Q9UEY8 706 aaKnown RBP22.78■■□□□ 1.24
ATG4D-204ENST00000586417 DHX15O43143 795 aaKnown RBP22.77■■□□□ 1.24
ATG4D-204ENST00000586417 FCGRTP55899 365 aa22.77■■□□□ 1.24
ATG4D-204ENST00000586417 CYP4A11Q02928 519 aa22.77■■□□□ 1.24
ATG4D-204ENST00000586417 MAP2K5Q13163 448 aa22.77■■□□□ 1.24
ATG4D-204ENST00000586417 CCDC144BQ3MJ40 725 aa22.77■■□□□ 1.24
ATG4D-204ENST00000586417 KIAA0895Q8NCT3 520 aa22.77■■□□□ 1.24
ATG4D-204ENST00000586417 USP6NLQ92738 828 aa22.77■■□□□ 1.24
ATG4D-204ENST00000586417 ZNF830Q96NB3 372 aaPredicted RBP22.77■■□□□ 1.24
ATG4D-204ENST00000586417 BEGAINQ9BUH8 593 aa22.77■■□□□ 1.24
ATG4D-204ENST00000586417 TEKT3Q9BXF9 490 aa22.77■■□□□ 1.24
ATG4D-204ENST00000586417 AGO4Q9HCK5 861 aaKnown RBP22.77■■□□□ 1.24
ATG4D-204ENST00000586417 RRAGDQ9NQL2 400 aaPredicted RBP22.77■■□□□ 1.24
ATG4D-204ENST00000586417 RGL1Q9NZL6 768 aa22.77■■□□□ 1.24
ATG4D-204ENST00000586417 LRRC37A2A6NM11 1700 aa22.77■■□□□ 1.24
ATG4D-204ENST00000586417 CHMP2AO43633 222 aa22.76■■□□□ 1.23
ATG4D-204ENST00000586417 SERPINC1P01008 464 aa22.76■■□□□ 1.23
ATG4D-204ENST00000586417 CYP11B2P19099 503 aa22.76■■□□□ 1.23
ATG4D-204ENST00000586417 UBASH3AP57075 661 aa22.76■■□□□ 1.23
ATG4D-204ENST00000586417 ITGB3BPQ13352 177 aaPredicted RBP22.76■■□□□ 1.23
ATG4D-204ENST00000586417 XRRA1Q6P2D8 792 aa22.76■■□□□ 1.23
ATG4D-204ENST00000586417 CCDC186Q7Z3E2 898 aa22.76■■□□□ 1.23
ATG4D-204ENST00000586417 KCTD17Q8N5Z5 321 aa22.76■■□□□ 1.23
ATG4D-204ENST00000586417 ZNF296Q8WUU4 475 aaPredicted RBP22.76■■□□□ 1.23
ATG4D-204ENST00000586417 HPS3Q969F9 1004 aa22.76■■□□□ 1.23
ATG4D-204ENST00000586417 TUFT1Q9NNX1 390 aa22.76■■□□□ 1.23
ATG4D-204ENST00000586417 SLITRK3O94933 977 aa22.76■■□□□ 1.23
ATG4D-204ENST00000586417 SSBP05455 408 aaKnown RBP eCLIP22.76■■□□□ 1.23
ATG4D-204ENST00000586417 TPM3P06753 285 aa22.76■■□□□ 1.23
ATG4D-204ENST00000586417 PTGS1P23219 599 aa22.76■■□□□ 1.23
ATG4D-204ENST00000586417 EDNRBP24530 442 aa22.76■■□□□ 1.23
ATG4D-204ENST00000586417 CCND2P30279 289 aa22.76■■□□□ 1.23
ATG4D-204ENST00000586417 MTMR1Q13613 665 aa22.76■■□□□ 1.23
ATG4D-204ENST00000586417 APTXQ7Z2E3 356 aaKnown RBP22.76■■□□□ 1.23
ATG4D-204ENST00000586417 NAP1L5Q96NT1 182 aaPredicted RBP22.76■■□□□ 1.23
ATG4D-204ENST00000586417 IWS1Q96ST2 819 aa22.76■■□□□ 1.23
ATG4D-204ENST00000586417 KCNF1Q9H3M0 494 aa22.76■■□□□ 1.23
ATG4D-204ENST00000586417 INTS13Q9NVM9 706 aa22.76■■□□□ 1.23
ATG4D-204ENST00000586417 GABRQQ9UN88 632 aa22.76■■□□□ 1.23
ATG4D-204ENST00000586417 DNM3Q9UQ16 869 aa22.76■■□□□ 1.23
ATG4D-204ENST00000586417 KIAA1217Q5T5P2 1943 aa22.76■■□□□ 1.23
ATG4D-204ENST00000586417 RGS20O76081 388 aa22.75■■□□□ 1.23
ATG4D-204ENST00000586417 CYP2B6P20813 491 aa22.75■■□□□ 1.23
ATG4D-204ENST00000586417 PMS1P54277 932 aaKnown RBP22.75■■□□□ 1.23
ATG4D-204ENST00000586417 STIM1Q13586 685 aa22.75■■□□□ 1.23
ATG4D-204ENST00000586417 ARSHQ5FYA8 562 aa22.75■■□□□ 1.23
ATG4D-204ENST00000586417 GPBP1Q86WP2 473 aa22.75■■□□□ 1.23
ATG4D-204ENST00000586417 SYT2Q8N9I0 419 aaPredicted RBP22.75■■□□□ 1.23
ATG4D-204ENST00000586417 DYDC2Q96IM9 177 aa22.75■■□□□ 1.23
ATG4D-204ENST00000586417 MAML3Q96JK9 1138 aa22.75■■□□□ 1.23
ATG4D-204ENST00000586417 CBFA2T2O43439 604 aa22.74■■□□□ 1.23
ATG4D-204ENST00000586417 EPHA7Q15375 998 aa22.74■■□□□ 1.23
ATG4D-204ENST00000586417 DHTKD1Q96HY7 919 aaPredicted RBP22.74■■□□□ 1.23
ATG4D-204ENST00000586417 PSMA7O14818 248 aa22.73■■□□□ 1.23
ATG4D-204ENST00000586417 FKTNO75072 461 aa22.73■■□□□ 1.23
ATG4D-204ENST00000586417 IDEP14735 1019 aa22.73■■□□□ 1.23
ATG4D-204ENST00000586417 MUTP22033 750 aa22.73■■□□□ 1.23
ATG4D-204ENST00000586417 PPP1R2P41236 205 aa22.73■■□□□ 1.23
ATG4D-204ENST00000586417 CTTNQ14247 550 aaKnown RBP22.73■■□□□ 1.23
ATG4D-204ENST00000586417 KIF22Q14807 665 aa22.73■■□□□ 1.23
ATG4D-204ENST00000586417 CCL14Q16627 93 aa22.73■■□□□ 1.23
ATG4D-204ENST00000586417 EEPD1Q7L9B9 569 aa22.73■■□□□ 1.23
ATG4D-204ENST00000586417 SLC39A2Q9NP94 309 aa22.73■■□□□ 1.23
ATG4D-204ENST00000586417 FLRT1Q9NZU1 646 aa22.73■■□□□ 1.23
ATG4D-204ENST00000586417 PKD2L1Q9P0L9 805 aa22.73■■□□□ 1.23
ATG4D-204ENST00000586417 TRIM49BA6NDI0 452 aa22.73■■□□□ 1.23
ATG4D-204ENST00000586417 HOXC6P09630 235 aa22.73■■□□□ 1.23
ATG4D-204ENST00000586417 CDK11BP21127 795 aaKnown RBP22.73■■□□□ 1.23
ATG4D-204ENST00000586417 PRKCZQ05513 592 aa22.73■■□□□ 1.23
ATG4D-204ENST00000586417 COASYQ13057 564 aa22.73■■□□□ 1.23
ATG4D-204ENST00000586417 STXBP2Q15833 593 aa22.73■■□□□ 1.23
ATG4D-204ENST00000586417 TTI2Q6NXR4 508 aa22.73■■□□□ 1.23
ATG4D-204ENST00000586417 SOCS4Q8WXH5 440 aa22.73■■□□□ 1.23
ATG4D-204ENST00000586417 BMP2KQ9NSY1 1161 aaPredicted RBP22.73■■□□□ 1.23
ATG4D-204ENST00000586417 DIS3Q9Y2L1 958 aaKnown RBP22.73■■□□□ 1.23
ATG4D-204ENST00000586417 NPHP3-ACAD11A0A0J9YXS1 232 aa22.72■■□□□ 1.23
ATG4D-204ENST00000586417 FRMD3A2A2Y4 597 aa22.72■■□□□ 1.23
ATG4D-204ENST00000586417 EYA4O95677 639 aa22.72■■□□□ 1.23
ATG4D-204ENST00000586417 PSMD2Q13200 908 aa22.72■■□□□ 1.23
ATG4D-204ENST00000586417 ARMCX2Q7L311 632 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms