RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 IKBKBO14920 756 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 PSMD10O75832 226 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 FGFR1OPO95684 399 aaKnown RBP6.89□□□□□ -1.31
LIG3-206ENST00000586058 ITGBL1O95965 494 aaPredicted RBP6.89□□□□□ -1.31
LIG3-206ENST00000586058 P4HBP07237 508 aaKnown RBP6.89□□□□□ -1.31
LIG3-206ENST00000586058 PLA2G4BP0C869 781 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 ARP10275 920 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 CDK11BP21127 795 aaKnown RBP6.89□□□□□ -1.31
LIG3-206ENST00000586058 ERCC5P28715 1186 aaPredicted RBP6.89□□□□□ -1.31
LIG3-206ENST00000586058 GJA5P36382 358 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 FMR1Q06787 632 aaKnown RBP eCLIP6.89□□□□□ -1.31
LIG3-206ENST00000586058 SPAG1Q07617 926 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 FSTL1Q12841 308 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 PAK1Q13153 545 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 CUL4BQ13620 913 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 MORC3Q14149 939 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 NEDD9Q14511 834 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 MCM6Q14566 821 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 FAM160B1Q5W0V3 765 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 ISM2Q6H9L7 571 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 GPAT2Q6NUI2 795 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 MIS18BP1Q6P0N0 1132 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 POTEEQ6S8J3 1075 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 C11orf57Q6ZUT1 292 aaPredicted RBP6.89□□□□□ -1.31
LIG3-206ENST00000586058 UNC13DQ70J99 1090 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 OTUD6AQ7L8S5 288 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 OTOP1Q7RTM1 612 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 DPP9Q86TI2 863 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 SAPCD2Q86UD0 394 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 LUZP1Q86V48 1076 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 VSIG10LQ86VR7 867 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 GPBP1Q86WP2 473 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 FAM114A1Q8IWE2 563 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 TPH2Q8IWU9 490 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 DRC7Q8IY82 874 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 GRAMD1CQ8IYS0 662 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 ABRAQ8N0Z2 381 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 IL31RAQ8NI17 732 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 BRI3BPQ8WY22 251 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 STAMQ92783 540 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 RNF166Q96A37 237 aaPredicted RBP6.89□□□□□ -1.31
LIG3-206ENST00000586058 LENG9Q96B70 501 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 INPP4AQ96PE3 977 aaPredicted RBP6.89□□□□□ -1.31
LIG3-206ENST00000586058 C7orf25Q9BPX7 421 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 LXNQ9BS40 222 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 TRIM9Q9C026 710 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 BLZF1Q9H2G9 400 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 ZHX3Q9H4I2 956 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 ZSWIM4Q9H7M6 989 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 MAGEC2Q9UBF1 373 aaPredicted RBP6.89□□□□□ -1.31
LIG3-206ENST00000586058 MORF4L1Q9UBU8 362 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 SLC9A2Q9UBY0 812 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 VAV3Q9UKW4 847 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 CTNND2Q9UQB3 1225 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 PASKQ96RG2 1323 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 THSD7BQ9C0I4 1608 aa6.89□□□□□ -1.31
LIG3-206ENST00000586058 E9PMD0 336 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 BACH1O14867 736 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 FOXN1O15353 648 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 MED24O75448 989 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 CNMDO75829 334 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 RHOBTB3O94955 611 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 FAM13AO94988 1023 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 EYA4O95677 639 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 SERPINC1P01008 464 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 TGFB3P10600 412 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 GAP43P17677 238 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 ITGB5P18084 799 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 QARSP47897 775 aaKnown RBP6.88□□□□□ -1.31
LIG3-206ENST00000586058 PSMC5P62195 406 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 MRPS9P82933 396 aaKnown RBP6.88□□□□□ -1.31
LIG3-206ENST00000586058 SPIRE1Q08AE8 756 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 NOGQ13253 232 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 MOGSQ13724 837 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 CTTNQ14247 550 aaKnown RBP6.88□□□□□ -1.31
LIG3-206ENST00000586058 TTLL4Q14679 1199 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 KIF22Q14807 665 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 KMT5BQ4FZB7 885 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 FILIP1LQ4L180 1135 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 CST9Q5W186 159 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 KLHL10Q6JEL2 608 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 SEPT14Q6ZU15 432 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 DYMQ7RTS9 669 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.88□□□□□ -1.31
LIG3-206ENST00000586058 SH3RF1Q7Z6J0 888 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 PLEKHH3Q7Z736 793 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 CATSPER3Q86XQ3 398 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 SLC17A8Q8NDX2 589 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 CYP2W1Q8TAV3 490 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 SPATA20Q8TB22 786 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 SOCS4Q8WXH5 440 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 DDX12PQ92771 950 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 GJA10Q969M2 543 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 DYDC2Q96IM9 177 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 TRIM47Q96LD4 638 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 DRC1Q96MC2 740 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 UIMC1Q96RL1 719 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 CTAGE1Q96RT6 745 aa6.88□□□□□ -1.31
LIG3-206ENST00000586058 MMTAG2Q9BU76 263 aaKnown RBP6.88□□□□□ -1.31
LIG3-206ENST00000586058 TIPINQ9BVW5 301 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms