RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 ERVK-24P63145 666 aa11.58□□□□□ -0.56
LIG3-203ENST00000585370 MCM6Q14566 821 aa11.58□□□□□ -0.56
LIG3-203ENST00000585370 EPHA7Q15375 998 aa11.58□□□□□ -0.56
LIG3-203ENST00000585370 TPD52L1Q16890 204 aaPredicted RBP11.58□□□□□ -0.56
LIG3-203ENST00000585370 MUM1L1Q5H9M0 696 aa11.58□□□□□ -0.56
LIG3-203ENST00000585370 MAP3K21Q5TCX8 1036 aa11.58□□□□□ -0.56
LIG3-203ENST00000585370 LRCH2Q5VUJ6 765 aa11.58□□□□□ -0.56
LIG3-203ENST00000585370 NCAPH2Q6IBW4 605 aa11.58□□□□□ -0.56
LIG3-203ENST00000585370 SNRNP48Q6IEG0 339 aaKnown RBP11.58□□□□□ -0.56
LIG3-203ENST00000585370 FOXR2Q6PJQ5 311 aa11.58□□□□□ -0.56
LIG3-203ENST00000585370 LBX2Q6XYB7 198 aa11.58□□□□□ -0.56
LIG3-203ENST00000585370 NECAB2Q7Z6G3 386 aa11.58□□□□□ -0.56
LIG3-203ENST00000585370 ANKRD20A12PQ8NF67 263 aa11.58□□□□□ -0.56
LIG3-203ENST00000585370 USP6NLQ92738 828 aa11.58□□□□□ -0.56
LIG3-203ENST00000585370 NUDT12Q9BQG2 462 aa11.58□□□□□ -0.56
LIG3-203ENST00000585370 ZNF577Q9BSK1 485 aa11.58□□□□□ -0.56
LIG3-203ENST00000585370 TEKT3Q9BXF9 490 aa11.58□□□□□ -0.56
LIG3-203ENST00000585370 PORCNQ9H237 461 aa11.58□□□□□ -0.56
LIG3-203ENST00000585370 ACAD9Q9H845 621 aa11.58□□□□□ -0.56
LIG3-203ENST00000585370 JADE2Q9NQC1 790 aa11.58□□□□□ -0.56
LIG3-203ENST00000585370 TBC1D22BQ9NU19 505 aa11.58□□□□□ -0.56
LIG3-203ENST00000585370 IFNKQ9P0W0 207 aa11.58□□□□□ -0.56
LIG3-203ENST00000585370 VAV3Q9UKW4 847 aa11.58□□□□□ -0.56
LIG3-203ENST00000585370 ZNF214Q9UL59 606 aaPredicted RBP11.58□□□□□ -0.56
LIG3-203ENST00000585370 KIAA1024Q9UPX6 916 aa11.58□□□□□ -0.56
LIG3-203ENST00000585370 SYNRGQ9UMZ2 1314 aa11.58□□□□□ -0.56
LIG3-203ENST00000585370 SPDYE16A6NNV3 312 aaPredicted RBP11.57□□□□□ -0.56
LIG3-203ENST00000585370 FGFR1OPO95684 399 aaKnown RBP11.57□□□□□ -0.56
LIG3-203ENST00000585370 PLA2G4BP0C869 781 aa11.57□□□□□ -0.56
LIG3-203ENST00000585370 TAL1P17542 331 aaPredicted RBP11.57□□□□□ -0.56
LIG3-203ENST00000585370 MAPK4P31152 587 aa11.57□□□□□ -0.56
LIG3-203ENST00000585370 PRCPP42785 496 aa11.57□□□□□ -0.56
LIG3-203ENST00000585370 PDE4DQ08499 809 aa11.57□□□□□ -0.56
LIG3-203ENST00000585370 TMEM132BQ14DG7 1078 aa11.57□□□□□ -0.56
LIG3-203ENST00000585370 FILIP1LQ4L180 1135 aa11.57□□□□□ -0.56
LIG3-203ENST00000585370 MORN1Q5T089 497 aa11.57□□□□□ -0.56
LIG3-203ENST00000585370 ARHGEF16Q5VV41 709 aa11.57□□□□□ -0.56
LIG3-203ENST00000585370 NSMFQ6X4W1 530 aa11.57□□□□□ -0.56
LIG3-203ENST00000585370 GPR142Q7Z601 462 aa11.57□□□□□ -0.56
LIG3-203ENST00000585370 CCDC65Q8IXS2 484 aa11.57□□□□□ -0.56
LIG3-203ENST00000585370 SYT2Q8N9I0 419 aaPredicted RBP11.57□□□□□ -0.56
LIG3-203ENST00000585370 ANKLE1Q8NAG6 615 aa11.57□□□□□ -0.56
LIG3-203ENST00000585370 NSUN6Q8TEA1 469 aaKnown RBP11.57□□□□□ -0.56
LIG3-203ENST00000585370 GTF3C2Q8WUA4 911 aaPredicted RBP11.57□□□□□ -0.56
LIG3-203ENST00000585370 NELFBQ8WX92 580 aa11.57□□□□□ -0.56
LIG3-203ENST00000585370 RMDN3Q96TC7 470 aa11.57□□□□□ -0.56
LIG3-203ENST00000585370 XPO4Q9C0E2 1151 aaKnown RBP11.57□□□□□ -0.56
LIG3-203ENST00000585370 HSD3B7Q9H2F3 369 aa11.57□□□□□ -0.56
LIG3-203ENST00000585370 OGDHLQ9ULD0 1010 aa11.57□□□□□ -0.56
LIG3-203ENST00000585370 MYMKA6NI61 221 aa11.56□□□□□ -0.56
LIG3-203ENST00000585370 LRRC10BA6NIK2 292 aa11.56□□□□□ -0.56
LIG3-203ENST00000585370 B4DLN1 442 aa11.56□□□□□ -0.56
LIG3-203ENST00000585370 IPO5O00410 1097 aaKnown RBP11.56□□□□□ -0.56
LIG3-203ENST00000585370 NRDCO43847 1150 aa11.56□□□□□ -0.56
LIG3-203ENST00000585370 CNMDO75829 334 aa11.56□□□□□ -0.56
LIG3-203ENST00000585370 EYA4O95677 639 aa11.56□□□□□ -0.56
LIG3-203ENST00000585370 PRKAR2AP13861 404 aaKnown RBP11.56□□□□□ -0.56
LIG3-203ENST00000585370 CD44P16070 742 aaKnown RBP11.56□□□□□ -0.56
LIG3-203ENST00000585370 CCNE1P24864 410 aa11.56□□□□□ -0.56
LIG3-203ENST00000585370 CCND2P30279 289 aa11.56□□□□□ -0.56
LIG3-203ENST00000585370 CACNB2Q08289 660 aaPredicted RBP11.56□□□□□ -0.56
LIG3-203ENST00000585370 BAATQ14032 418 aaPredicted RBP11.56□□□□□ -0.56
LIG3-203ENST00000585370 PGM5Q15124 567 aa11.56□□□□□ -0.56
LIG3-203ENST00000585370 CCL14Q16627 93 aa11.56□□□□□ -0.56
LIG3-203ENST00000585370 KLHL10Q6JEL2 608 aa11.56□□□□□ -0.56
LIG3-203ENST00000585370 NLRX1Q86UT6 975 aa11.56□□□□□ -0.56
LIG3-203ENST00000585370 CATSPER3Q86XQ3 398 aa11.56□□□□□ -0.56
LIG3-203ENST00000585370 RIOX2Q8IUF8 465 aa11.56□□□□□ -0.56
LIG3-203ENST00000585370 SPC24Q8NBT2 197 aa11.56□□□□□ -0.56
LIG3-203ENST00000585370 DNERQ8NFT8 737 aa11.56□□□□□ -0.56
LIG3-203ENST00000585370 RDM1Q8NG50 284 aa11.56□□□□□ -0.56
LIG3-203ENST00000585370 CYP2W1Q8TAV3 490 aa11.56□□□□□ -0.56
LIG3-203ENST00000585370 LRRC15Q8TF66 581 aa11.56□□□□□ -0.56
LIG3-203ENST00000585370 SOCS4Q8WXH5 440 aa11.56□□□□□ -0.56
LIG3-203ENST00000585370 DDX12PQ92771 950 aa11.56□□□□□ -0.56
LIG3-203ENST00000585370 GPRASP2Q96D09 838 aa11.56□□□□□ -0.56
LIG3-203ENST00000585370 CDHR1Q96JP9 859 aa11.56□□□□□ -0.56
LIG3-203ENST00000585370 TAAR1Q96RJ0 339 aa11.56□□□□□ -0.56
LIG3-203ENST00000585370 IWS1Q96ST2 819 aa11.56□□□□□ -0.56
LIG3-203ENST00000585370 HSD17B14Q9BPX1 270 aa11.56□□□□□ -0.56
LIG3-203ENST00000585370 EIF2AK1Q9BQI3 630 aaKnown RBP11.56□□□□□ -0.56
LIG3-203ENST00000585370 PDCD2LQ9BRP1 358 aa11.56□□□□□ -0.56
LIG3-203ENST00000585370 PAGR1Q9BTK6 254 aa11.56□□□□□ -0.56
LIG3-203ENST00000585370 THAP9Q9H5L6 903 aa11.56□□□□□ -0.56
LIG3-203ENST00000585370 PXMP2Q9NR77 195 aa11.56□□□□□ -0.56
LIG3-203ENST00000585370 HOMER2Q9NSB8 354 aa11.56□□□□□ -0.56
LIG3-203ENST00000585370 KCND2Q9NZV8 630 aa11.56□□□□□ -0.56
LIG3-203ENST00000585370 COL20A1Q9P218 1284 aa11.56□□□□□ -0.56
LIG3-203ENST00000585370 CTNND2Q9UQB3 1225 aa11.56□□□□□ -0.56
LIG3-203ENST00000585370 ALPK3Q96L96 1907 aa11.56□□□□□ -0.56
LIG3-203ENST00000585370 MED24O75448 989 aa11.55□□□□□ -0.56
LIG3-203ENST00000585370 SLC25A27O95847 323 aa11.55□□□□□ -0.56
LIG3-203ENST00000585370 SPATA31C1P0DKV0 1188 aa11.55□□□□□ -0.56
LIG3-203ENST00000585370 ARP10275 920 aa11.55□□□□□ -0.56
LIG3-203ENST00000585370 ECM1Q16610 540 aa11.55□□□□□ -0.56
LIG3-203ENST00000585370 CDKAL1Q5VV42 579 aa11.55□□□□□ -0.56
LIG3-203ENST00000585370 B3GNT9Q6UX72 402 aa11.55□□□□□ -0.56
LIG3-203ENST00000585370 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.55□□□□□ -0.56
LIG3-203ENST00000585370 CCDC186Q7Z3E2 898 aa11.55□□□□□ -0.56
LIG3-203ENST00000585370 PLEKHH3Q7Z736 793 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 174.4 ms